Commits for braney

v440_preview2 to v440_base (2022-11-14 to 2022-11-21) v440

ff0bb7390308d6bac396ef3a22e93aae522a397b Mon Nov 14 13:43:49 2022 -0800

• tweak Methods HTML to be more correct
  • src/hg/makeDb/trackDb/human/hg38/omimGene2.html - lines changed 5, context: html, text, full: html, text

dc158162a43c9346fea29b22e64df03b2d9b9cc2 Mon Nov 14 14:43:36 2022 -0800

• disable track duplication on custom tracks, isPCR results, and hub tracks
  • src/hg/hgTrackUi/hgTrackUi.c - lines changed 6, context: html, text, full: html, text

ec2f9cd20b7c6d615c233ab4f16be579b9c85ae0 Tue Nov 15 15:48:41 2022 -0800

• put track duplication under hg.conf control
  • src/hg/hgTrackUi/hgTrackUi.c - lines changed 3, context: html, text, full: html, text
  • src/hg/hgTracks/hgTracks.c - lines changed 3, context: html, text, full: html, text
  • src/hg/inc/dupTrack.h - lines changed 3, context: html, text, full: html, text
  • src/hg/lib/dupTrack.c - lines changed 7, context: html, text, full: html, text

5e93998ad4e2934a13e49d2fe9c64c8251795fac Wed Nov 16 12:19:22 2022 -0800

• otto-mate the ClinVar Submissions track
  • src/hg/lib/clinvarSubBB.as - lines changed 34, context: html, text, full: html, text
  • src/hg/utils/otto/clinvar/assignColors - lines changed 21, context: html, text, full: html, text
  • src/hg/utils/otto/clinvar/assignScore - lines changed 17, context: html, text, full: html, text
  • src/hg/utils/otto/clinvar/clinvarSubLolly - lines changed 34, context: html, text, full: html, text
  • src/hg/utils/otto/clinvar/doUpdate.sh - lines changed 2, context: html, text, full: html, text
  • src/hg/utils/otto/clinvar/makeFranklin - lines changed 40, context: html, text, full: html, text
  • src/hg/utils/otto/clinvar/makefile - lines changed 3, context: html, text, full: html, text

d676f45096db580dfc143740ca2c75e970b45978 Wed Nov 16 13:15:03 2022 -0800

• move dbSnp153 to the archive
  • src/hg/cgilib/cartEdit2.c - lines changed 27, context: html, text, full: html, text
  • src/hg/cgilib/cartRewrite.c - lines changed 2, context: html, text, full: html, text
  • src/hg/cgilib/makefile - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/dbSnpArchiveHg19.new.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/dbSnpArchiveHg38.new.ra - lines changed 1, context: html, text, full: html, text