File Changes for hiram

v455_preview2 to v455_base (2023-10-02 to 2023-10-09) v455

• src/hg/makeDb/doc/asmHubs/master.run.list
  • lines changed 1, context: html, text, full: html, text
    b5545c453909057d382c04d36100e73d9ce18e0a Wed Oct 4 11:51:14 2023 -0700
    add GCA_025583915.1_AnoSag2.1 brown anole (Geneva1000 2022) per user request refs #29545
• src/hg/makeDb/doc/asmHubs/mkHubIndex.pl
  • lines changed 43, context: html, text, full: html, text
    631a7882f8c689b66f3d81fc8f25fbf98f73499a Mon Oct 2 16:55:41 2023 -0700
    remove the all genomes at once attachment option refs #29545
  • lines changed 17, context: html, text, full: html, text
    1ae12a1d8f166902e7697634f6a209fe15a70bf2 Wed Oct 4 14:48:52 2023 -0700
    adding outlink to IGV browser refs #29545
  • lines changed 1, context: html, text, full: html, text
    c41a4f1cb64b449dcba3318ec07c7569825d1ac9 Wed Oct 4 16:23:42 2023 -0700
    correctly indicate IGV link in common name column header title refs #29545
• src/hg/makeDb/doc/vertebrateAsmHub/vertebrate.orderList.tsv
  • lines changed 1, context: html, text, full: html, text
    b5545c453909057d382c04d36100e73d9ce18e0a Wed Oct 4 11:51:14 2023 -0700
    add GCA_025583915.1_AnoSag2.1 brown anole (Geneva1000 2022) per user request refs #29545
• src/hg/makeDb/doc/vgpAsmHub/vgp.alternate.orderList.tsv
  • lines changed 1, context: html, text, full: html, text
    96c411aa4f02250ce383d99aff584395c5298f98 Tue Oct 3 09:44:59 2023 -0700
    update to the alternate list adding one refs #29545
• src/hg/makeDb/doc/vgpAsmHub/vgp.primary.orderList.tsv
  • lines changed 73, context: html, text, full: html, text
    ba37a4e86e631db3df00bf18b8eaf4d8d296387f Tue Oct 3 09:18:54 2023 -0700
    an update to the primary listing refs #29545
• src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt
  • lines changed 26, context: html, text, full: html, text
    ba37a4e86e631db3df00bf18b8eaf4d8d296387f Tue Oct 3 09:18:54 2023 -0700
    an update to the primary listing refs #29545
  • lines changed 1, context: html, text, full: html, text
    96c411aa4f02250ce383d99aff584395c5298f98 Tue Oct 3 09:44:59 2023 -0700
    update to the alternate list adding one refs #29545
• src/hg/makeDb/trackDb/human/hg38/cactus447way.html
  • lines changed 2, context: html, text, full: html, text
    28a0537782226f93bac8972e591eca140a182034 Tue Oct 3 12:07:25 2023 -0700
    updated longLabel per Benedict request refs #31528
• src/hg/makeDb/trackDb/human/hg38/trackDb.447way.ra
  • lines changed 2, context: html, text, full: html, text
    28a0537782226f93bac8972e591eca140a182034 Tue Oct 3 12:07:25 2023 -0700
    updated longLabel per Benedict request refs #31528
  • lines changed 21, context: html, text, full: html, text
    7789aff7cff9c17e2ff56209af5225989b354916 Wed Oct 4 21:37:20 2023 -0700
    adding a phyloP track from Lukas for a primates subset their calculation refs #31528
• src/hg/utils/automation/asmHubGatewayPage.pl
  • lines changed 13, context: html, text, full: html, text
    69674723e539da023afcf3612d50bcc89be5f29f Wed Oct 4 14:58:09 2023 -0700
    adding cite reference stanza refs #29545