Commits for jcasper

v455_preview to v455_preview2 (2023-09-25 to 2023-10-02) v455

b038f3dafce99493b0ca00305538c6a3dd6f041a Tue Sep 26 15:58:44 2023 -0700

• Initial commit of track decorators, refs #30237
  • src/hg/hgTrackUi/hgTrackUi.c - lines changed 14, context: html, text, full: html, text
  • src/hg/hgTracks/decorator.c - lines changed 1387, context: html, text, full: html, text
  • src/hg/hgTracks/decorator.h - lines changed 163, context: html, text, full: html, text
  • src/hg/hgTracks/hgTracks.c - lines changed 95, context: html, text, full: html, text
  • src/hg/hgTracks/hgTracks.h - lines changed 16, context: html, text, full: html, text
  • src/hg/hgTracks/makefile - lines changed 3, context: html, text, full: html, text
  • src/hg/hgTracks/mouseOver.c - lines changed 60, context: html, text, full: html, text
  • src/hg/hgTracks/mouseOver.h - lines changed 21, context: html, text, full: html, text
  • src/hg/hgTracks/simpleTracks.c - lines changed 194, context: html, text, full: html, text
  • src/hg/htdocs/goldenPath/help/decorator.html - lines changed 157, context: html, text, full: html, text
  • src/hg/htdocs/goldenPath/help/trackDb/trackDbDoc.html - lines changed 5, context: html, text, full: html, text
  • src/hg/htdocs/goldenPath/help/trackDb/trackDbHub.v3.html - lines changed 11, context: html, text, full: html, text
  • src/hg/htdocs/goldenPath/help/trackDb/trackDbLibrary.shtml - lines changed 39, context: html, text, full: html, text
  • src/hg/htdocs/images/decoration_example.png - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/hg/inc/decoration.h - lines changed 112, context: html, text, full: html, text
  • src/hg/inc/decoratorUi.h - lines changed 41, context: html, text, full: html, text
  • src/hg/lib/decoration.as - lines changed 20, context: html, text, full: html, text
  • src/hg/lib/decoration.c - lines changed 375, context: html, text, full: html, text
  • src/hg/lib/decoration.sql - lines changed 26, context: html, text, full: html, text
  • src/hg/lib/decoratorUi.c - lines changed 161, context: html, text, full: html, text
  • src/hg/lib/makefile - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/trackDbCustom.c - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/tagTypes.tab - lines changed 3, context: html, text, full: html, text
  • src/inc/memgfx.h - lines changed 20, context: html, text, full: html, text
  • src/lib/memgfx.c - lines changed 1, context: html, text, full: html, text

a3fa5699e76f0ca4a07e3b6c4bf4c7f8de356c85 Fri Sep 29 09:15:52 2023 -0700

• Forgot to check in makedocs for knownGeneV44 on hg38/m39, refs #30840, #30841
  • src/hg/makeDb/doc/ucscGenes/hg38.gencodeV44.sh - lines changed 21, context: html, text, full: html, text
  • src/hg/makeDb/doc/ucscGenes/mm39.gencodeVM33.sh - lines changed 2, context: html, text, full: html, text

4f7d1b78fd8a46850f64417108189eabccf2b2d5 Sun Oct 1 01:11:25 2023 -0700

• Installing updated hg.conf files from UCSC servers
  • confs/rr.hg.conf - lines changed 1, context: html, text, full: html, text

4c18b3b304307799d2875220deff659b2ee0f292 Sun Oct 1 21:36:37 2023 -0700

• Missed a few pathways for creating tracks; the generic label and map functions need to be available for all the tracks they were already a part of. refs #32303, #30237
  • src/hg/hgTracks/bedTrack.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgTracks/hgTracks.h - lines changed 14, context: html, text, full: html, text
  • src/hg/hgTracks/simpleTracks.c - lines changed 9, context: html, text, full: html, text