Commits for braney

v461_preview to v461_preview2 (2024-02-06 to 2024-02-12) v461

37d145c71807801efd9cb02926515c82e84c1c71 Wed Feb 7 10:12:23 2024 -0800

• set up a mechanism to limit memory through an hg.conf variable
  • src/hg/hgTracks/mainMain.c - lines changed 3, context: html, text, full: html, text
  • src/hg/inc/hgConfig.h - lines changed 3, context: html, text, full: html, text
  • src/hg/lib/hgConfig.c - lines changed 13, context: html, text, full: html, text
  • src/inc/portable.h - lines changed 4, context: html, text, full: html, text
  • src/lib/osunix.c - lines changed 13, context: html, text, full: html, text

db521cd9c64d7adb1506c50c080d04f9b2d2febf Wed Feb 7 12:37:17 2024 -0800

• do all the exon numbering stuff in squish as well as pack and full
  • src/hg/hgTracks/simpleTracks.c - lines changed 2, context: html, text, full: html, text

3e441dc3bb095bff8b39c39347008dba5b8667a2 Thu Feb 8 15:22:11 2024 -0800

• autorecognize the number of fields in a bigBed if the user doesn't specify it in the type field
  • src/hg/hgTracks/bigBedTrack.c - lines changed 37, context: html, text, full: html, text

d97534ce6ff21f6eb8e9fbd46827753ffba119b1 Thu Feb 8 15:49:49 2024 -0800

• fix bug that crashes if hgt.trackImgOnly is not in cart
  • src/hg/hgTracks/hgTracks.c - lines changed 1, context: html, text, full: html, text

324c79db532cb487e7b3a377954f0821872a7d07 Thu Feb 8 16:57:37 2024 -0800

• add logging of memory high water mark
  • src/hg/hgTracks/mainMain.c - lines changed 9, context: html, text, full: html, text

957d66d68b880ec48372643e602e9dbff4326a00 Fri Feb 9 11:32:11 2024 -0800

• if bigBed is specified as type without other words then we don't score filter
  • src/hg/hgTracks/bigBedTrack.c - lines changed 3, context: html, text, full: html, text