File Changes for gperez2

v463_preview2 to v463_base (2024-03-25 to 2024-04-01) v463

• src/hg/htdocs/FAQ/FAQlink.html
  • lines changed 101, context: html, text, full: html, text
    837fb9fdc2e3db16abf0c91e3382acc7e3b84191 Thu Mar 28 12:39:08 2024 -0700
    Added optional URL parameters from customTrack.html#SHARE, updated them for hg38, and added them to FAQlink.html#trackViz, refs #30575
• src/hg/htdocs/goldenPath/help/hgTrackHubHelp.html
  • lines changed 173, context: html, text, full: html, text
    8555ec47e45208a9e8a9466cae97238fade7699a Thu Mar 28 11:56:22 2024 -0700
    Updating the Sharing Track Hubs section for hgTrackHubHelp.html, refs #21107
• src/hg/htdocs/goldenPath/newsarch.html
  • lines changed 24, context: html, text, full: html, text
    6a60cdb51e2832102b71d7b88c6740825720929f Tue Mar 26 12:19:53 2024 -0700
    Announcing the release of the gnomAD v4 Constraint Metrics (hg38) and gnomAD Non-cancer filter (hg19/hg38) tracks, refs #33084 #32916
  • lines changed 2, context: html, text, full: html, text
    41e0c6eca3423830e7bb7601fc1a3d45c3deb72d Tue Mar 26 12:32:58 2024 -0700
    Fixing typos, refs #33084 #32916
• src/hg/htdocs/indexNews.html
  • lines changed 12, context: html, text, full: html, text
    6a60cdb51e2832102b71d7b88c6740825720929f Tue Mar 26 12:19:53 2024 -0700
    Announcing the release of the gnomAD v4 Constraint Metrics (hg38) and gnomAD Non-cancer filter (hg19/hg38) tracks, refs #33084 #32916
• src/hg/makeDb/doc/asmHubs/lastzRuns.txt
  • lines changed 83, context: html, text, full: html, text
    994fbb05bd562ec59ff2e8d55218fcb149543dd1 Sat Mar 30 15:21:06 2024 -0700
    oviAri3 to GCF_016772045.2 lastz/chain/net run for user, refs #33280
• src/hg/makeDb/doc/asmHubs/master.run.list
  • lines changed 1, context: html, text, full: html, text
    bc67d5db33dff1145794043430e6c6ee773ebd8a Tue Mar 26 14:04:49 2024 -0700
    adding invertebrate Corbicula_fluminea per user request, refs #29545
  • lines changed 1, context: html, text, full: html, text
    1bf83faa56e30270fe61eea966b02d3bbb3966aa Fri Mar 29 17:54:43 2024 -0700
    adding mammals Phodopus_sungorus per user liftOver request, refs #33276
• src/hg/makeDb/doc/invertebrateAsmHub/invertebrate.orderList.tsv
  • lines changed 1, context: html, text, full: html, text
    1c8081a7e1da51c52c6221510a9afdee43081980 Tue Mar 26 14:25:47 2024 -0700
    adding Corbicula_fluminea Asian clam (DE_01 2016) refs #29545
• src/hg/makeDb/doc/mammalsAsmHub/mammals.orderList.tsv
  • lines changed 1, context: html, text, full: html, text
    b1868759bc1a5edcf4ac9a0dfb6843c7caa0f0c1 Fri Mar 29 18:34:55 2024 -0700
    adding Phodopus_sungorus Siberian hamster (SSSS 2022), refs #33276
• src/hg/makeDb/doc/mm10.txt
  • lines changed 83, context: html, text, full: html, text
    9f3484cc0500569ffe999e9514c79746621ef087 Sat Mar 30 15:12:29 2024 -0700
    mm10 to GCF_016772045.2 lastz/chain/net run for user, refs #33231
• src/hg/makeDb/doc/mm39/lastzRuns.txt
  • lines changed 164, context: html, text, full: html, text
    08ee8989aa3b4c6d48bd30d3e205705523cb6f9e Sat Mar 30 15:00:04 2024 -0700
    mm39 to GCA_921999005.2/GCA_921997125.2 lastz/chain/net run for user, refs #32859
• src/hg/makeDb/trackDb/human/hg19/trackDb.gnomad.ra
  • lines changed 2, context: html, text, full: html, text
    6a60cdb51e2832102b71d7b88c6740825720929f Tue Mar 26 12:19:53 2024 -0700
    Announcing the release of the gnomAD v4 Constraint Metrics (hg38) and gnomAD Non-cancer filter (hg19/hg38) tracks, refs #33084 #32916
• src/hg/makeDb/trackDb/human/hg38/gnomad.constraint.public.ra
  • lines changed 1, context: html, text, full: html, text
    6a60cdb51e2832102b71d7b88c6740825720929f Tue Mar 26 12:19:53 2024 -0700
    Announcing the release of the gnomAD v4 Constraint Metrics (hg38) and gnomAD Non-cancer filter (hg19/hg38) tracks, refs #33084 #32916
• src/hg/makeDb/trackDb/human/hg38/gnomad.ra
  • lines changed 2, context: html, text, full: html, text
    6a60cdb51e2832102b71d7b88c6740825720929f Tue Mar 26 12:19:53 2024 -0700
    Announcing the release of the gnomAD v4 Constraint Metrics (hg38) and gnomAD Non-cancer filter (hg19/hg38) tracks, refs #33084 #32916
• src/utils/qa/checkTableStatusDump.sh
  • lines changed 24, context: html, text, full: html, text
    28aebf0195fe9254b8624931ebc0c46a8ddcf154 Sun Mar 31 15:14:41 2024 -0700
    Adding a script to replace the checkTableStatus.csh script for the TABLE STATUS dump cron, refs #32812
• src/utils/qa/makefile
  • lines changed 1, context: html, text, full: html, text
    510f283911040ce5f54ea8358e0d1ae34707ca37 Sun Mar 31 15:18:54 2024 -0700
    Adding a script to replace the checkTableStatus.csh script for the TABLE STATUS dump cron that will only email when there is an error/issue, refs #32812