Commits for max

v463_preview2 to v463_base (2024-03-25 to 2024-04-01) v463

3f5d580335f671dc10964ec9e5b549cb3cb9c367 Tue Mar 26 06:36:26 2024 -0700

• adding view chrom sizes menu entry and improving the seq view page a little, refs #25796
  • src/hg/hgTracks/hgTracks.c - lines changed 34, context: html, text, full: html, text
  • src/hg/hgTracks/menu.c - lines changed 3, context: html, text, full: html, text

1942abfbe86d5b3f5ed3ad0482a31a9354587e18 Tue Mar 26 09:30:03 2024 -0700

• preparing clinvar for somatic mutations, no ticket yet
  • src/hg/utils/otto/clinvar/clinVarToBed - lines changed 43, context: html, text, full: html, text
  • src/hg/utils/otto/clinvar/clinvar.as - lines changed 3, context: html, text, full: html, text
  • src/hg/utils/otto/clinvar/clinvarSub.sql - lines changed 25, context: html, text, full: html, text

f5a1b930828e2737ee09d3dc71b3a0c9c2068452 Wed Mar 27 08:21:03 2024 -0700

• otto job for decipher failed, otto email
  • src/hg/utils/otto/decipher/processDecipher.py - lines changed 1, context: html, text, full: html, text

7974211879e0733f2ff5ee1dd8fab80e88718e5a Thu Mar 28 03:02:25 2024 -0700

• add gencode V39, I got the version numbers wrong, refs #33072
  • src/hg/makeDb/schema/all.joiner - lines changed 2, context: html, text, full: html, text

278473e4cc842cfbc4b46094dfb170572c8dbcd1 Thu Mar 28 12:16:46 2024 -0700

• taking back assembly info link for next build, email from Lou
  • src/hg/hgTracks/hgTracks.c - lines changed 6, context: html, text, full: html, text

997313ba169e4423867bb78b32165b8f6b858c53 Thu Mar 28 16:15:09 2024 -0700

• Revert "taking back assembly info link for next build, email from Lou" This reverts commit 278473e4cc842cfbc4b46094dfb170572c8dbcd1.
  • src/hg/hgTracks/hgTracks.c - lines changed 6, context: html, text, full: html, text

ae50b52c96908b7abb9af9f456d386ce141a3be3 Thu Mar 28 16:17:38 2024 -0700

• trying again to fix the build, email from Lou
  • src/hg/hgTracks/hgTracks.c - lines changed 2, context: html, text, full: html, text