File Changes for hiram

v471_preview to v471_preview2 (2024-09-02 to 2024-09-09) v471

• src/hg/htdocs/assemblySearch.html
  • lines changed 22, context: html, text, full: html, text
    879450f84abeea7f424bde8ab9ad95669eef3b53 Thu Sep 5 10:12:26 2024 -0700
    upper case corrections refs #32596
  • lines changed 1, context: html, text, full: html, text
    d64d6f53f31908c3570247a94023297d44ce3ee4 Thu Sep 5 14:47:32 2024 -0700
    add prompt text to input box and correctly do not place + in front of - refs #32596
  • lines changed 11, context: html, text, full: html, text
    41b27825db55ab0699dacce3c18c34cf791e6428 Sat Sep 7 23:49:38 2024 -0700
    correctly manipulate the copy to clipboard link refs #32596
• src/hg/hubApi/findGenome.c
  • lines changed 74, context: html, text, full: html, text
    1fb288d9c135df7d88a8accc0792f2986afe17bc Tue Sep 3 17:59:08 2024 -0700
    correctly manage the special characters in a single word, to be done same for multiple words refs #32596
• src/hg/js/assemblySearch.js
  • lines changed 12, context: html, text, full: html, text
    879450f84abeea7f424bde8ab9ad95669eef3b53 Thu Sep 5 10:12:26 2024 -0700
    upper case corrections refs #32596
  • lines changed 20, context: html, text, full: html, text
    9c2d11ccfb0c87e3561b584b1413bd0e21f9b285 Thu Sep 5 14:30:47 2024 -0700
    correctly highlight a compound word even when * wildcard included refs #32596
  • lines changed 3, context: html, text, full: html, text
    d64d6f53f31908c3570247a94023297d44ce3ee4 Thu Sep 5 14:47:32 2024 -0700
    add prompt text to input box and correctly do not place + in front of - refs #32596
  • lines changed 63, context: html, text, full: html, text
    41b27825db55ab0699dacce3c18c34cf791e6428 Sat Sep 7 23:49:38 2024 -0700
    correctly manipulate the copy to clipboard link refs #32596
  • lines changed 8, context: html, text, full: html, text
    c9e09744ad3e9050ff9ab8395de4a2fc1196b016 Sun Sep 8 10:51:52 2024 -0700
    correctly trim white space from before and after the query string and correctly test for words beginning with + or - refs #32596
  • lines changed 6, context: html, text, full: html, text
    ea483f476722f14fa41edf8832074600ca8df8ce Sun Sep 8 17:19:36 2024 -0700
    prevent duplication of words in the result during the highlight process refs #32596
• src/hg/makeDb/doc/asmHubs/master.run.list
  • lines changed 4, context: html, text, full: html, text
    5d4991083d9c6db272b7bc4113e859a172fd584a Tue Sep 3 11:28:15 2024 -0700
    adding a couple per user request refs #29545
  • lines changed 2, context: html, text, full: html, text
    09ce1698f3a2ff54d67e414af4bdf1c55161e773 Wed Sep 4 22:57:29 2024 -0700
    adding RSV per dinner conversation and a fish request from a user refs #29545
• src/hg/makeDb/doc/fishAsmHub/fish.orderList.tsv
  • lines changed 2, context: html, text, full: html, text
    09ce1698f3a2ff54d67e414af4bdf1c55161e773 Wed Sep 4 22:57:29 2024 -0700
    adding RSV per dinner conversation and a fish request from a user refs #29545
• src/hg/makeDb/doc/fungiAsmHub/fungi.orderList.tsv
  • lines changed 1, context: html, text, full: html, text
    92e476fe0e5f25177ade29caff17394262987d94 Thu Sep 5 13:45:43 2024 -0700
    updating one refs #29545
• src/hg/makeDb/doc/invertebrateAsmHub/invertebrate.orderList.tsv
  • lines changed 2, context: html, text, full: html, text
    5d4991083d9c6db272b7bc4113e859a172fd584a Tue Sep 3 11:28:15 2024 -0700
    adding a couple per user request refs #29545
• src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt
  • lines changed 3, context: html, text, full: html, text
    bd0f0d984ed310e0ff894232ed3bf777002bdbbf Tue Sep 3 14:35:04 2024 -0700
    updates kicked a couple genbanks out refs #29545
• src/hg/makeDb/doc/legacyAsmHub/legacy.orderList.tsv
  • lines changed 2, context: html, text, full: html, text
    bd0f0d984ed310e0ff894232ed3bf777002bdbbf Tue Sep 3 14:35:04 2024 -0700
    updates kicked a couple genbanks out refs #29545
• src/hg/makeDb/doc/mammalsAsmHub/mammals.orderList.tsv
  • lines changed 2, context: html, text, full: html, text
    5d4991083d9c6db272b7bc4113e859a172fd584a Tue Sep 3 11:28:15 2024 -0700
    adding a couple per user request refs #29545
• src/hg/makeDb/doc/viralAsmHub/viral.orderList.tsv
  • lines changed 1, context: html, text, full: html, text
    09ce1698f3a2ff54d67e414af4bdf1c55161e773 Wed Sep 4 22:57:29 2024 -0700
    adding RSV per dinner conversation and a fish request from a user refs #29545
• src/hg/utils/automation/doNcbiRefSeq.pl
  • lines changed 1, context: html, text, full: html, text
    4cbeaf5dc4cfdbf36a4bf93685a95e2189102e7b Wed Sep 4 09:56:08 2024 -0700
    correct typo error in script for archiving files refs #33088