File Changes for hiram

switch to commits view, user index

v472_preview to v472_preview2 (2024-09-23 to 2024-09-30) v472

Show details

src/hg/hgGateway/hgGateway.c
- lines changed 11, context: html, text, full: html, text
  2776159fd4f68c3c5a1a114f238dc2f568a5bd64 Fri Sep 27 11:07:16 2024 -0700
  allow use of new genark table with more columns refs #32596
- lines changed 71, context: html, text, full: html, text
  621822a450d38d641f59df03aa461fa7dba64da6 Fri Sep 27 15:24:08 2024 -0700
  now with one word searches on the assemblyList table refs #32596
- lines changed 2, context: html, text, full: html, text
  5442a9baf9e3667418b1dbda2225d9c9389b7249 Fri Sep 27 15:35:26 2024 -0700
  order by priority for the assemblyList result refs #32596
- lines changed 8, context: html, text, full: html, text
  e5297f22c5d7c1cb0b041b0ea4c66206a244c90b Mon Sep 30 10:36:52 2024 -0700
  add multiple word search to the hgGateway assembly search box function refs #32596
- lines changed 8, context: html, text, full: html, text
  ccda596950ffdad4d7560c1bb660b31c1bd3b55a Mon Sep 30 11:07:54 2024 -0700
  put a limit on genark returned list refs #32596
src/hg/hubApi/findGenome.c
- lines changed 20, context: html, text, full: html, text
  9d9f00e7ae0c4007130239f651fbc587f25f244f Tue Sep 24 23:02:55 2024 -0700
  eliminate specific references to hgcentraltest refs #32596
src/hg/inc/assemblyList.h
- lines changed 6, context: html, text, full: html, text
  e5297f22c5d7c1cb0b041b0ea4c66206a244c90b Mon Sep 30 10:36:52 2024 -0700
  add multiple word search to the hgGateway assembly search box function refs #32596
src/hg/lib/assemblyList.c
- lines changed 40, context: html, text, full: html, text
  e5297f22c5d7c1cb0b041b0ea4c66206a244c90b Mon Sep 30 10:36:52 2024 -0700
  add multiple word search to the hgGateway assembly search box function refs #32596
src/hg/lib/genark.sql
- lines changed 1, context: html, text, full: html, text
  e7b66711387ac5b785cd52148ca4ce1180609167 Fri Sep 27 11:13:00 2024 -0700
  add the FULLTEXT index refs #32596
src/hg/makeDb/doc/asmHubs/master.run.list
- lines changed 14, context: html, text, full: html, text
  772a45f22132de29b8ab26d4b42a2c0fe6088ae5 Tue Sep 24 10:16:18 2024 -0700
  BRC update nearing completion refs #34337
- lines changed 3, context: html, text, full: html, text
  47ed7b59bcc5fb7777382709b4ae4e3b27ba2b5a Tue Sep 24 14:37:08 2024 -0700
  eliminate some duplicates refs $34337
- lines changed 10, context: html, text, full: html, text
  766cc89bdfe27cfd40cd68e46eb266dccdfe6077 Wed Sep 25 23:28:03 2024 -0700
  BRC update refs #34337
- lines changed 3, context: html, text, full: html, text
  6cb05644f9dc2dcb89eba11052f5a218116c083c Thu Sep 26 08:52:03 2024 -0700
  eliminate mistaken duplicates refs #34337
- lines changed 9, context: html, text, full: html, text
  ea5d663f1b5af778bb8ba4d10d956d248c9566c2 Thu Sep 26 14:28:03 2024 -0700
  BRC update gets up to 769 refs #34337
src/hg/makeDb/doc/asmHubs/sendToHgdownload.sh
- lines changed 4, context: html, text, full: html, text
  444891eef90db1bdbff678ed49c19f3fd5c9f68d Tue Sep 24 15:31:27 2024 -0700
  do not try to send UCSC database browsers refs #34337
src/hg/makeDb/doc/asmHubs/tsvToJson.py
- lines changed 2, context: html, text, full: html, text
  9cf3f9dfbd2770a517953c7f43ffade95be9a9de Tue Sep 24 15:26:53 2024 -0700
  add the ucscBrowser link to the stderr outpur ref #34337
src/hg/makeDb/doc/brcAsmHub/brc.orderList.tsv
- lines changed 23, context: html, text, full: html, text
  772a45f22132de29b8ab26d4b42a2c0fe6088ae5 Tue Sep 24 10:16:18 2024 -0700
  BRC update nearing completion refs #34337
- lines changed 18, context: html, text, full: html, text
  ea5d663f1b5af778bb8ba4d10d956d248c9566c2 Thu Sep 26 14:28:03 2024 -0700
  BRC update gets up to 769 refs #34337
src/hg/makeDb/doc/fungiAsmHub/fungi.orderList.tsv
- lines changed 6, context: html, text, full: html, text
  36a317dc1cd15748c1fe2b18eef4991141fe1464 Mon Sep 23 15:13:11 2024 -0700
  BRC update moved some to legacy refs #34337
- lines changed 7, context: html, text, full: html, text
  772a45f22132de29b8ab26d4b42a2c0fe6088ae5 Tue Sep 24 10:16:18 2024 -0700
  BRC update nearing completion refs #34337
- lines changed 5, context: html, text, full: html, text
  f9f8a289464407f2f6a3337760bf8270d2117517 Tue Sep 24 14:36:40 2024 -0700
  asmHubs/master.run.list
- lines changed 6, context: html, text, full: html, text
  9a4f1d0a4e48296598ef888c93c89930518ed59b Wed Sep 25 14:36:20 2024 -0700
  eliminate some duplicates refs #34337
- lines changed 3, context: html, text, full: html, text
  766cc89bdfe27cfd40cd68e46eb266dccdfe6077 Wed Sep 25 23:28:03 2024 -0700
  BRC update refs #34337
src/hg/makeDb/doc/invertebrateAsmHub/invertebrate.orderList.tsv
- lines changed 1, context: html, text, full: html, text
  c4c8fc39c7091c0f19878c93f8b92897c756b95d Mon Sep 23 15:15:11 2024 -0700
  BRC moved one to legacy refs #34337
- lines changed 15, context: html, text, full: html, text
  772a45f22132de29b8ab26d4b42a2c0fe6088ae5 Tue Sep 24 10:16:18 2024 -0700
  BRC update nearing completion refs #34337
- lines changed 4, context: html, text, full: html, text
  f9f8a289464407f2f6a3337760bf8270d2117517 Tue Sep 24 14:36:40 2024 -0700
  asmHubs/master.run.list
- lines changed 2, context: html, text, full: html, text
  9a4f1d0a4e48296598ef888c93c89930518ed59b Wed Sep 25 14:36:20 2024 -0700
  eliminate some duplicates refs #34337
- lines changed 9, context: html, text, full: html, text
  766cc89bdfe27cfd40cd68e46eb266dccdfe6077 Wed Sep 25 23:28:03 2024 -0700
  BRC update refs #34337
- lines changed 3, context: html, text, full: html, text
  6cb05644f9dc2dcb89eba11052f5a218116c083c Thu Sep 26 08:52:03 2024 -0700
  eliminate mistaken duplicates refs #34337
- lines changed 9, context: html, text, full: html, text
  ea5d663f1b5af778bb8ba4d10d956d248c9566c2 Thu Sep 26 14:28:03 2024 -0700
  BRC update gets up to 769 refs #34337
src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt
- lines changed 4, context: html, text, full: html, text
  9a4f1d0a4e48296598ef888c93c89930518ed59b Wed Sep 25 14:36:20 2024 -0700
  eliminate some duplicates refs #34337
src/hg/makeDb/doc/legacyAsmHub/legacy.orderList.tsv
- lines changed 5, context: html, text, full: html, text
  9a4f1d0a4e48296598ef888c93c89930518ed59b Wed Sep 25 14:36:20 2024 -0700
  eliminate some duplicates refs #34337
src/hg/utils/automation/doAssemblyHub.pl
- lines changed 6, context: html, text, full: html, text
  22125620d4dc7d776599c3bf6e99932ba43a6db5 Thu Sep 26 10:28:21 2024 -0700
  allow an assembly to work even if it has no repeatMasker result refs #34337
src/hg/utils/otto/genArk/README
- lines changed 3, context: html, text, full: html, text
  736e0d588f220cef8093cf1ba6ea3bb4f376baf4 Fri Sep 27 11:25:40 2024 -0700
  now loading up the new expanded genark.hgcentral table refs #32596
src/hg/utils/otto/genArk/addAssemblyList.sh
- lines changed 7, context: html, text, full: html, text
  736e0d588f220cef8093cf1ba6ea3bb4f376baf4 Fri Sep 27 11:25:40 2024 -0700
  now loading up the new expanded genark.hgcentral table refs #32596
src/hg/utils/otto/genArk/dbDb.clade.year.acc.tsv
- lines changed 248, context: html, text, full: html, text
  736e0d588f220cef8093cf1ba6ea3bb4f376baf4 Fri Sep 27 11:25:40 2024 -0700
  now loading up the new expanded genark.hgcentral table refs #32596

switch to commits view, user index