File Changes for hiram

v476_preview to v476_preview2 (2024-12-16 to 2025-01-06) v476

• src/hg/makeDb/doc/asmHubs/cladeListings.sh
  • lines changed 26, context: html, text, full: html, text
    9ed9912f5703b6ba1c660fc9702b0d8d61358ee6 Thu Dec 19 14:20:13 2024 -0800
    helper script to manage clades refs #34370
• src/hg/makeDb/doc/mm39/initialBuild.txt
  • lines changed 67, context: html, text, full: html, text
    8dea55f517c6b7ebfd2e39e93a8294d65b270f47 Mon Dec 30 06:06:04 2024 -0800
    adding official cytoBand from NCBI refs #35007
• src/hg/makeDb/doc/vgpAsmHub/vgp.legacy.orderList.tsv
  • lines changed 1, context: html, text, full: html, text
    fd35b9a0e11c4bd917246480cc542e1b58e60ebe Thu Dec 19 14:22:23 2024 -0800
    fixup a common name refs #34370
• src/hg/makeDb/trackDb/mouse/mm39/cytoBand.ra
  • lines changed 7, context: html, text, full: html, text
    8dea55f517c6b7ebfd2e39e93a8294d65b270f47 Mon Dec 30 06:06:04 2024 -0800
    adding official cytoBand from NCBI refs #35007
  • lines changed 9, context: html, text, full: html, text
    b86a64d107e037d0af2f13748f591a6e746c5e6d Sun Jan 5 11:51:55 2025 -0800
    trying a cytoBand track with index - does not seem to index refs #35007
• src/hg/makeDb/trackDb/mouse/mm39/trackDb.ra
  • lines changed 2, context: html, text, full: html, text
    8dea55f517c6b7ebfd2e39e93a8294d65b270f47 Mon Dec 30 06:06:04 2024 -0800
    adding official cytoBand from NCBI refs #35007
• src/hg/utils/automation/asmHubTrackDb.sh
  • lines changed 2, context: html, text, full: html, text
    1891633f3daf8ca3fb2342cb421b46bcdb68feec Fri Dec 13 11:46:42 2024 -0800
    fix spelling of trackDb variable refs #34370
• src/inc/common.h
  • lines changed 8, context: html, text, full: html, text
    59c5d74bd333b5e2a11b22f1bb29f512a6eb9c7a Thu Jan 2 17:37:11 2025 -0800
    ifdef the code for the ArraySize macro so the older compiler will see what it usually sees and the new one sees what it wants - TO BE FIXED - eventually refs #34990
  • lines changed 1, context: html, text, full: html, text
    fc1c3661b9fb623c6d87e635a4825ebc24947b26 Thu Jan 2 18:26:27 2025 -0800
    the new compiler needs the pragma, mistake to comment it out refs #34990
• src/lib/https.c
  • lines changed 4, context: html, text, full: html, text
    ebd67b0a1ea3e1fdf5cd5d1ef7d9e3a618c25169 Thu Dec 19 17:46:25 2024 -0800
    Mac OSX needs O_NONBLOCK instead of SOCK_NONBLOCK no redmine
• src/utils/findMotif/findMotif.c
  • lines changed 3, context: html, text, full: html, text
    a67466b94ea03dd7890183553292999d10197f30 Mon Jan 6 12:01:26 2025 -0800
    fix segfault error on missing -motif argument no redmine