Commits for gperez2

v489_base to v490_preview (2025-10-13 to 2025-10-20) v490

3064e879357aec796980c1fd9364590320ef19d7 Mon Oct 13 14:24:10 2025 -0700

• Adding a reference to the BAC-end pairs description page per user request, refs #36339
  • src/hg/makeDb/trackDb/zebrafish/danRer1/bacEndPairs.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/zebrafish/danRer2/bacEndPairs.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/zebrafish/danRer3/bacEndPairs.html - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/zebrafish/danRer4/bacEndPairs.html - lines changed 3, context: html, text, full: html, text

281685b26873cd6651852667145c7050e7f5c907 Mon Oct 13 16:58:17 2025 -0700

• Code review edits, refs #36502
  • src/hg/makeDb/trackDb/human/spliceImpactSuper.html - lines changed 3, context: html, text, full: html, text

d6b429ab3e6d240e3ae97c85d1ec15b049ea237b Tue Oct 14 14:53:11 2025 -0700

• Edits to the Credits section regarding SpliceAI, refs #35100
  • src/hg/makeDb/trackDb/human/spliceImpactSuper.html - lines changed 4, context: html, text, full: html, text

19c304618e4e6bb7734e8a290bee78df0956bd8c Tue Oct 14 23:44:29 2025 -0700

• Adding ASHG 2025 poster, refs #36182
  • src/hg/htdocs/goldenPath/help/posters.html - lines changed 12, context: html, text, full: html, text

5e5eaea033858ccd8425ecd38eb6c74bd85869a5 Wed Oct 15 13:18:56 2025 -0700

• Adding poster gallery link to the home page, refs #36182
  • src/hg/htdocs/indexMeetings.html - lines changed 4, context: html, text, full: html, text

10271a8f9e23612d541e7907ddb691fc81f369d3 Wed Oct 15 16:54:35 2025 -0700

• Adding a SpliceAI Wildtype section under Display Conventions and Configuration, refs #35100
  • src/hg/makeDb/trackDb/human/spliceImpactSuper.html - lines changed 7, context: html, text, full: html, text

d764b452ec02e93caa39423c0efe4038a28d2810 Wed Oct 15 17:34:05 2025 -0700

• Updating the home page meetings based on Bob's upcoming workshops, refs #36525
  • src/hg/htdocs/indexMeetings.html - lines changed 9, context: html, text, full: html, text

a82f9ce1e938c6bcc22065a62b93a90beb187072 Thu Oct 16 13:16:27 2025 -0700

• Releasing and announcing the SpliceAI Wildtype tracks, refs #35100
  • src/hg/htdocs/goldenPath/newsarch.html - lines changed 31, context: html, text, full: html, text
  • src/hg/htdocs/images/newsArchImages/spliceAIWildtype.png - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/hg/htdocs/indexNews.html - lines changed 12, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/spliceAIWt.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/spliceImpactSuper.ra - lines changed 1, context: html, text, full: html, text

3f87a9e09a1f6d0b0416c3174b1abaeb445dbf5d Fri Oct 17 09:00:29 2025 -0700

• Changing the Wildtype SpliceAI composite track default visibility to full, refs #35100
  • src/hg/makeDb/trackDb/human/spliceAIWt.ra - lines changed 1, context: html, text, full: html, text

46d71c2759ca70678b56df2774636f689e8e2d1a Fri Oct 17 14:18:09 2025 -0700

• mm10 to rabbit(GCA_013371645.1) lastz/chain/net run for user, refs #36348
  • src/hg/makeDb/doc/asmHubs/lastzRuns.txt - lines changed 81, context: html, text, full: html, text