Commits for mspeir

v500_preview2 to v500_base (2026-06-15 to 2026-06-29) v500

22339e5f262e1e9ed004c5fb2f9ea54a45648418 Tue Jun 23 14:45:09 2026 -0700

• New --errors-only option outputs only errors from checkTrackUiLinks.csh, ignoring No errors found messages, refs #37379
  • src/utils/qa/checkUiLinks.py - lines changed 40, context: html, text, full: html, text

b9589bd31f984863f6b7ae48e322859f3c66c7ee Tue Jun 23 16:00:21 2026 -0700

• porting script to python3, refs #37573
  • src/utils/qa/copyHgcentral - lines changed 65, context: html, text, full: html, text

aa145ac73643ba31fab4dadd0e2d65996ae90349 Wed Jun 24 07:30:04 2026 -0700

• porting runBits to python3, no refs
  • src/utils/qa/runBits - lines changed 2, context: html, text, full: html, text

7295ac9e32f256e136f762bbc0b4b39ce78cc108 Wed Jun 24 08:56:52 2026 -0700

• fixing link to varaico terms of use, no refs
  • src/hg/makeDb/trackDb/human/varaico.html - lines changed 1, context: html, text, full: html, text

181787eb05d529cae4d743a10e3d161bd2be2f50 Wed Jun 24 13:47:25 2026 -0700

• adding link to slide decks, refs #37292
  • docs/index.md - lines changed 3, context: html, text, full: html, text

6dec8ee413485b5cd696cabbfdb528582d3b82c3 Wed Jun 24 13:59:25 2026 -0700

• fixing link for g2p track, refs #35054
  • src/hg/htdocs/goldenPath/newsarch.html - lines changed 2, context: html, text, full: html, text

493239164214cc39a342541ebb30dd0afa188593 Fri Jun 26 09:35:52 2026 -0700

• tweaking capitalization in title at top of desc page, no refs
  • src/hg/makeDb/trackDb/human/hs1/LCRs.html - lines changed 1, context: html, text, full: html, text

7072384d5e6f4228bec4186d3d677527be0c9bc5 Fri Jun 26 09:37:20 2026 -0700

• Adding data access to hs1 pages on the RR, refs #
  • src/hg/makeDb/trackDb/human/hs1/hs1PrimateChainNet.html - lines changed 27, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/html/catLiftOffGenesV1.html - lines changed 25, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/html/censat.html - lines changed 24, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/html/clinVar20220313.html - lines changed 18, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/html/dbSNP155.html - lines changed 18, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/html/encode.html - lines changed 25, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/html/gwasSNPs2022-03-08.html - lines changed 18, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/html/hgCactus.html - lines changed 17, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/html/hgLiftOver.html - lines changed 16, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/html/hgUnique.html - lines changed 24, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/html/microsatellites.html - lines changed 24, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/html/rdnaModel.html - lines changed 24, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/html/sedefSegDups.html - lines changed 24, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/html/sgdpCopyNumber.html - lines changed 24, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/html/t2tRepeatMasker.html - lines changed 24, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hs1/problematic.html - lines changed 24, context: html, text, full: html, text