File Changes for baertsch

v252_preview to v252_preview2 (2011-05-17 to 2011-05-31) v252

• src/hg/hgGene/hgGene.c
  • lines changed 1, context: html, text, full: html, text
    remove pseudogene from hgGene details page
• src/hg/hgGene/hgGeneData/section.ra
  • lines changed 6, context: html, text, full: html, text
    retro track changes to add ucscRetroOrtho table and hgc, hgTrackUI changes.
  • lines changed 1, context: html, text, full: html, text
    restore accidental deletion of name pathways
• src/hg/hgGene/pseudoGene.c
  • lines changed 33, context: html, text, full: html, text
    retro track changes to add ucscRetroOrtho table and hgc, hgTrackUI changes.
• src/hg/hgTrackUi/hgTrackUi.c
  • lines changed 5, context: html, text, full: html, text
    retro track changes to add ucscRetroOrtho table and hgc, hgTrackUI changes.
• src/hg/hgTracks/retroGene.c
  • lines changed 49, context: html, text, full: html, text
    retro track changes to add ucscRetroOrtho table and hgc, hgTrackUI changes.
• src/hg/hgTracks/retroGene.h
  • lines changed 3, context: html, text, full: html, text
    retro track changes to add ucscRetroOrtho table and hgc, hgTrackUI changes.
• src/hg/hgc/retroClick.c
  • lines changed 51, context: html, text, full: html, text
    retro track changes to add ucscRetroOrtho table and hgc, hgTrackUI changes.
  • lines changed 8, context: html, text, full: html, text
    use version number in retro click score calc
• src/hg/inc/ucscRetroInfo.h
  • lines changed 138, context: html, text, full: html, text
    changes to hgTracks, hgc, hgTrackUi, ucscRetroOrtho, ucscRetroInfo to change data structure and cart handling
• src/hg/inc/ucscRetroOrtho.h
  • lines changed 89, context: html, text, full: html, text
    add ucscRetroOrtho table and code for ucscRetro child table
• src/hg/lib/makefile
  • lines changed 2, context: html, text, full: html, text
    retro track changes to add ucscRetroOrtho table and hgc, hgTrackUI changes.
• src/hg/lib/ucscRetroInfo.as
  • lines changed 57, context: html, text, full: html, text
    changes to hgTracks, hgc, hgTrackUi, ucscRetroOrtho, ucscRetroInfo to change data structure and cart handling
• src/hg/lib/ucscRetroInfo.c
  • lines changed 488, context: html, text, full: html, text
    changes to hgTracks, hgc, hgTrackUi, ucscRetroOrtho, ucscRetroInfo to change data structure and cart handling
• src/hg/lib/ucscRetroInfo.sql
  • lines changed 30, context: html, text, full: html, text
    retro track changes to add ucscRetroOrtho table and hgc, hgTrackUI changes.
  • lines changed 4, context: html, text, full: html, text
    trackDb and sql changes for retrotracks
• src/hg/lib/ucscRetroOrtho.as
  • lines changed 7, context: html, text, full: html, text
    add ucscRetroOrtho table and code for ucscRetro child table
• src/hg/lib/ucscRetroOrtho.c
  • lines changed 189, context: html, text, full: html, text
    add ucscRetroOrtho table and code for ucscRetro child table
• src/hg/lib/ucscRetroOrtho.sql
  • lines changed 13, context: html, text, full: html, text
    add ucscRetroOrtho table and code for ucscRetro child table
  • lines changed 1, context: html, text, full: html, text
    trackDb and sql changes for retrotracks
• src/hg/makeDb/schema/all.joiner
  • lines changed 23, context: html, text, full: html, text
    retro track changes to add ucscRetroOrtho table and hgc, hgTrackUI changes.
  • lines changed 6, context: html, text, full: html, text
    add version to ucscRetro tables and fix dupeOk
• src/hg/makeDb/trackDb/human/hg18/trackDb.ra
  • lines changed 53, context: html, text, full: html, text
    trackDb and sql changes for retrotracks
  • lines changed 1, context: html, text, full: html, text
    fix version in retro search
• src/hg/makeDb/trackDb/human/hg18/ucscRetroAli1.html
  • lines changed 68, context: html, text, full: html, text
    track descriptions and trackDb.ra for retro tracks
• src/hg/makeDb/trackDb/human/hg19/trackDb.ra
  • lines changed 2, context: html, text, full: html, text
    retro track changes to add ucscRetroOrtho table and hgc, hgTrackUI changes.
  • lines changed 21, context: html, text, full: html, text
    trackDb and sql changes for retrotracks
  • lines changed 1, context: html, text, full: html, text
    fix version in retro search
• src/hg/makeDb/trackDb/human/hg19/ucscRetroAli1.html
  • lines changed 68, context: html, text, full: html, text
    track descriptions and trackDb.ra for retro tracks
• src/hg/makeDb/trackDb/human/trackDb.ra
  • lines changed 40, context: html, text, full: html, text
    trackDb and sql changes for retrotracks
• src/hg/makeDb/trackDb/mouse/mm9/trackDb.ra
  • lines changed 53, context: html, text, full: html, text
    trackDb and sql changes for retrotracks
  • lines changed 1, context: html, text, full: html, text
    fix version in retro search
• src/hg/makeDb/trackDb/mouse/mm9/ucscRetroAli1.html
  • lines changed 68, context: html, text, full: html, text
    track descriptions and trackDb.ra for retro tracks
• src/hg/makeDb/trackDb/tagTypes.tab
  • lines changed 1, context: html, text, full: html, text
    retro track changes to add ucscRetroOrtho table and hgc, hgTrackUI changes.
• src/hg/makeDb/trackDb/trackDb.ra
  • lines changed 1, context: html, text, full: html, text
    track descriptions and trackDb.ra for retro tracks
  • lines changed 53, context: html, text, full: html, text
    trackDb and sql changes for retrotracks
• src/hg/makeDb/trackDb/zebrafish/trackDb.ra
  • lines changed 1, context: html, text, full: html, text
    trackDb and sql changes for retrotracks