Commits for hiram

v280_preview to v280_preview2 (2013-02-19 to 2013-02-26) v280

• add clean makefile target and expand description of ignoreDups usage message
  • src/utils/faToTwoBit/faToTwoBit.c - lines changed 2, context: html, text, full: html, text
  • src/utils/faToTwoBit/makefile - lines changed 4, context: html, text, full: html, text
• monDom5 rn5 chaining is failing
  • src/hg/makeDb/doc/rn5.txt - lines changed 9, context: html, text, full: html, text
• add assembly information from NCBI
  • src/hg/makeDb/doc/oreNil1.txt - lines changed 10, context: html, text, full: html, text
• adding compile rule for debugging in this directory
  • src/hg/makeDb/hgLoadOut/makefile - lines changed 3, context: html, text, full: html, text
• removed obsolete mm10Strains1Composite.ra
  • src/hg/makeDb/trackDb/mouse/mm10/mm10Strains1Composite.ra - lines changed 93, context: html, text, full: html, text
• cosmic is changing its WEB site URL redmine 9386
  • src/hg/hgc/hgc.c - lines changed 4, context: html, text, full: html, text
• cosmic is changing its WEB site URL redmine 9386
  • src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 1, context: html, text, full: html, text
• update cosmic track to v63
  • src/hg/makeDb/doc/hg19.txt - lines changed 28, context: html, text, full: html, text