Commits for kate
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v301_preview to v301_preview2 (2014-05-26 to 2014-06-02) v301
- Show ENCODE peaks full height if no peak summit is shown. refs #13305
- src/hg/hgTracks/encode.c - lines changed 1, context: html, text, full: html, text
- Merge branch 'master' into dhs
- Draft track description using text from Chromatin landscapes paper. refs #13230
- src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgDnaseMaster.html - lines changed 60, context: html, text, full: html, text
- Minor doc changes
- src/hg/makeDb/doc/encodeAwgHg19.txt - lines changed 35, context: html, text, full: html, text
- Merge branch 'master' into dhs
- DNase Combined track from ENCODE Analysis, with new data format (BED5Sources). Similar to factorSource, but more general and lighter-weight. refs #13230.
- src/hg/inc/bed5Sources.h - lines changed 82, context: html, text, full: html, text
- src/hg/lib/bed5Sources.as - lines changed 12, context: html, text, full: html, text
- src/hg/lib/bed5Sources.c - lines changed 208, context: html, text, full: html, text
- src/hg/lib/bed5Sources.sql - lines changed 19, context: html, text, full: html, text
- src/hg/makeDb/doc/encodeAwgHg19.txt - lines changed 31, context: html, text, full: html, text
- src/hg/makeDb/hgBedSources/hgBedSources.c - lines changed 138, context: html, text, full: html, text
- src/hg/makeDb/hgBedSources/makefile - lines changed 3, context: html, text, full: html, text
- src/hg/makeDb/hgBedSources/test.in.bed - lines changed 10, context: html, text, full: html, text
- src/hg/makeDb/hgBedSources/test.out.bed - lines changed 10, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeAwg.ra - lines changed 16, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgDnaseCombinedSites.html - lines changed 60, context: html, text, full: html, text
- src/hg/makeDb/trackDb/tagTypes.tab - lines changed 1, context: html, text, full: html, text
- Merge branch 'master' into dhs
- Updating make doc.
- src/hg/makeDb/doc/encodeAwgHg19.txt - lines changed 1, context: html, text, full: html, text
- Adding header comment
- src/test/buildTableDescriptions.pl - lines changed 5, context: html, text, full: html, text
- Remove debug stuff
- src/test/buildTableDescriptions.pl - lines changed 3, context: html, text, full: html, text
- Adding as file for source name table
- src/hg/lib/wgEncodeAwgDnaseCombinedSources.as - lines changed 6, context: html, text, full: html, text
- Fix up schema for tableDescriptions
- src/hg/lib/wgEncodeAwgDnaseCombinedSources.as - lines changed 3, context: html, text, full: html, text
- Trim field name for hgc extraFields cosmetics
- src/hg/lib/bed5Sources.as - lines changed 3, context: html, text, full: html, text
- Add mapping of ids to names for extra fields. Reusing the extra fields code instead of adding track-specific code. refs #13230
- Cleanup to isolate id/name mapping code. refs #13230
- Add settings to display ids as cell types with links. refs #13230
- src/hg/makeDb/trackDb/human/hg19/wgEncodeAwg.ra - lines changed 5, context: html, text, full: html, text
- src/hg/makeDb/trackDb/tagTypes.tab - lines changed 2, context: html, text, full: html, text
- Removing unneeded file schema code. refs #13230
- src/hg/inc/bed5Sources.h - lines changed 82, context: html, text, full: html, text
- src/hg/lib/bed5Sources.c - lines changed 208, context: html, text, full: html, text
- Merge branch 'dhs'
- Label tweak for consistency.
- src/hg/makeDb/trackDb/human/hg19/wgEncodeAwg.ra - lines changed 1, context: html, text, full: html, text
- Refine track description. refs #13230
- src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgDnaseCombinedSites.html - lines changed 56, context: html, text, full: html, text
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