File Changes for hiram

v323_preview2 to v323_base (2015-09-28 to 2015-10-05) v323

• src/ameme/ameme.c
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    fixup gcc warnings for -Wunused-but-set-variable refs #16121
    
• src/ameme/fragFind.c
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• src/hg/encode3/validateFiles/validateFiles.c
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• src/hg/encode3/validateManifest/validateManifest.c
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• src/hg/featureBits/featureBits.c
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• src/hg/getRnaPred/getRnaPred.c
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    fixup gcc warnings for -Wunused-but-set-variable refs #16121
    
• src/hg/inc/versionInfo.h
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    New version number v323
    
• src/hg/lib/agp.c
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• src/hg/lib/altGraphX.c
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• src/hg/lib/bedDetail.c
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• src/hg/lib/borf.c
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• src/hg/lib/cart.c
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• src/hg/lib/customFactory.c
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• src/hg/lib/genoLay.c
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• src/hg/lib/ggCluster.c
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• src/hg/lib/hgFind.c
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• src/hg/lib/hgFindSpecCustom.c
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• src/hg/lib/hui.c
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• src/hg/lib/rmskOut.c
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• src/hg/lib/rmskOut2.c
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• src/hg/lib/sqlProg.c
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• src/hg/lib/web.c
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• src/hg/lib/wikiTrack.c
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    fixup gcc warnings for -Wunused-but-set-variable refs #16121
    
• src/hg/makeDb/doc/canFam3.txt
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    lastz runs per Ting lab requests refs #15476
    
• src/hg/makeDb/doc/mm9.txt
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    lastz runs per Ting lab requests refs #15476
    
• src/hg/makeDb/doc/rheMac3.txt
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    lastz runs per Ting lab requests refs #15476
    
• src/hg/makeDb/doc/rn4.txt
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    lastz runs per Ting lab requests refs #15476
    
• src/hg/mouseStuff/chainToPsl/chainToPsl.c
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• src/hg/mouseStuff/mafCoverage/mafCoverage.c
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• src/hg/pslReps/pslReps.c
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    fixup gcc warnings for -Wunused-but-set-variable refs #16121
    
• src/hg/utils/automation/genbank/rmskDescription.pl
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    catching up with todays versions refs #16078
    
• src/hg/utils/tdbQuery/tdbQuery.c
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    fixup gcc warnings for -Wunused-but-set-variable refs #16121
    
• src/jkOwnLib/ffSeedExtend.c
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• src/jkOwnLib/fuzzyFind.c
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• src/jkOwnLib/gfBlatLib.c
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• src/jkOwnLib/xenbig.c
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• src/jkOwnLib/xensmall.c
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• src/lib/bPlusTree.c
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• src/lib/bbiRead.c
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• src/lib/bigBed.c
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• src/lib/cheapcgi.c
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• src/lib/codebias.c
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• src/lib/dnautil.c
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• src/lib/fof.c
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• src/lib/mime.c
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• src/lib/net.c
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• src/lib/nt4.c
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• src/lib/options.c
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• src/lib/pslGenoShow.c
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• src/lib/pslShow.c
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• src/lib/udc.c
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• src/lib/wormdna.c
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• src/parasol/para/para.c
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• src/parasol/paraHub/paraHub.c
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• src/parasol/paraNodeStart/paraNodeStart.c
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• src/parasol/parasol/parasol.c
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• src/utils/qa/weeklybld/buildEnv.csh
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    v323 final build refs #16092