File Changes for hiram

v380_base to v381_preview (2019-04-08 to 2019-04-15) v381

• src/hg/htdocs/goldenPath/help/api.html
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    3c3c42b1f7491b065fe19858f24d91fd93524fe5 Mon Apr 8 14:37:27 2019 -0700
    added support for PSL types and remove reference to top-level explore tools refs #18869
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    3955a694a0ba5c50f6e3e917b4943c8e2cc09f62 Tue Apr 9 08:37:44 2019 -0700
    adding repeat masker supported refs #18869
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    4c733b55a2b422a460903e221f680d53c468afa2 Tue Apr 9 15:59:34 2019 -0700
    add the trackLeavesOnly option refs #18869
• src/hg/hubApi/apiUtils.c
  • lines changed 14, context: html, text, full: html, text
    f01366a14e4574f413ed9b55a0d1c36376074dd8 Tue Apr 9 14:43:00 2019 -0700
    adding an allowedBigBedType() function to recognize that set of big types refs #18869
  • lines changed 14, context: html, text, full: html, text
    6eacdcdb29afdeefa7ba7a5ec1e52e13e86680f9 Wed Apr 10 14:45:45 2019 -0700
    better layout for selection menus and now returning errors properly refs #18869
  • lines changed 3, context: html, text, full: html, text
    4ab10833a68e3f95eb8449def2b67fac9416fb91 Thu Apr 11 11:06:02 2019 -0700
    now with 404 error for open problems and scrolling text window with margin refs #18869
• src/hg/hubApi/dataApi.h
  • lines changed 5, context: html, text, full: html, text
    f01366a14e4574f413ed9b55a0d1c36376074dd8 Tue Apr 9 14:43:00 2019 -0700
    adding an allowedBigBedType() function to recognize that set of big types refs #18869
  • lines changed 5, context: html, text, full: html, text
    9dea574cbee73dd37366cbb33a993569647184c1 Tue Apr 9 15:16:06 2019 -0700
    adding trackLeavesOnly option and returning all containers on list tracks refs #18869
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    6eacdcdb29afdeefa7ba7a5ec1e52e13e86680f9 Wed Apr 10 14:45:45 2019 -0700
    better layout for selection menus and now returning errors properly refs #18869
• src/hg/hubApi/getData.c
  • lines changed 44, context: html, text, full: html, text
    24992e962e50a3ba5ab93e1af502fde3a0b99893 Mon Apr 8 14:31:37 2019 -0700
    now supporting psl types refs #18869
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    0222476b54fcfb70acb694f9819c9fbcbbeea7f8 Tue Apr 9 08:31:05 2019 -0700
    adding supported type rmsk refs #18869
  • lines changed 3, context: html, text, full: html, text
    f01366a14e4574f413ed9b55a0d1c36376074dd8 Tue Apr 9 14:43:00 2019 -0700
    adding an allowedBigBedType() function to recognize that set of big types refs #18869
  • lines changed 37, context: html, text, full: html, text
    6eacdcdb29afdeefa7ba7a5ec1e52e13e86680f9 Wed Apr 10 14:45:45 2019 -0700
    better layout for selection menus and now returning errors properly refs #18869
• src/hg/hubApi/hubApi.c
  • lines changed 4, context: html, text, full: html, text
    24992e962e50a3ba5ab93e1af502fde3a0b99893 Mon Apr 8 14:31:37 2019 -0700
    now supporting psl types refs #18869
  • lines changed 2, context: html, text, full: html, text
    0222476b54fcfb70acb694f9819c9fbcbbeea7f8 Tue Apr 9 08:31:05 2019 -0700
    adding supported type rmsk refs #18869
  • lines changed 25, context: html, text, full: html, text
    e8bc6082872e9d16854282dd7affdc703b736023 Tue Apr 9 13:43:48 2019 -0700
    add sample getData for superTrack child refs #18869
  • lines changed 5, context: html, text, full: html, text
    f01366a14e4574f413ed9b55a0d1c36376074dd8 Tue Apr 9 14:43:00 2019 -0700
    adding an allowedBigBedType() function to recognize that set of big types refs #18869
  • lines changed 15, context: html, text, full: html, text
    9dea574cbee73dd37366cbb33a993569647184c1 Tue Apr 9 15:16:06 2019 -0700
    adding trackLeavesOnly option and returning all containers on list tracks refs #18869
  • lines changed 230, context: html, text, full: html, text
    6eacdcdb29afdeefa7ba7a5ec1e52e13e86680f9 Wed Apr 10 14:45:45 2019 -0700
    better layout for selection menus and now returning errors properly refs #18869
  • lines changed 11, context: html, text, full: html, text
    4ab10833a68e3f95eb8449def2b67fac9416fb91 Thu Apr 11 11:06:02 2019 -0700
    now with 404 error for open problems and scrolling text window with margin refs #18869
  • lines changed 9, context: html, text, full: html, text
    adebe24a8bd4bae96112b0565465e43fa202a50d Thu Apr 11 14:39:46 2019 -0700
    add JSON public hubs and UCSC database genomes example links refs #18869
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    a4727aff4884c0ac6aba563875e3d78f0b7a27bd Fri Apr 12 23:10:21 2019 -0700
    error 459 is actually 429 refs #18869
• src/hg/hubApi/list.c
  • lines changed 7, context: html, text, full: html, text
    9dea574cbee73dd37366cbb33a993569647184c1 Tue Apr 9 15:16:06 2019 -0700
    adding trackLeavesOnly option and returning all containers on list tracks refs #18869
  • lines changed 33, context: html, text, full: html, text
    6eacdcdb29afdeefa7ba7a5ec1e52e13e86680f9 Wed Apr 10 14:45:45 2019 -0700
    better layout for selection menus and now returning errors properly refs #18869
  • lines changed 3, context: html, text, full: html, text
    c36458c5460d65ac3eda186e2659f1cbb2b6b695 Thu Apr 11 13:53:21 2019 -0700
    fixing up error returns refs #18869
• src/hg/hubApi/tests/expected/test0.gz
  • lines changed 0, context: html, text, full: html, text
    fe765adf8b12a7ce73c5290274f3d7c1b204ae0b Wed Apr 10 14:46:35 2019 -0700
    now returning errors properly refs #18869
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    0f08117c738abc8d206ac07f43c50545108c042e Wed Apr 10 15:00:00 2019 -0700
    allow different servers for testing refs #18869
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    675d9d22b454efa28e3e095c8fe1c94efc5d1858 Wed Apr 10 15:14:13 2019 -0700
    eliminate registrationTime which may be different on other SQL servers refs #18869
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    5bf541678926a192e843b1dc6da145e0fe3b31cf Thu Apr 11 13:55:51 2019 -0700
    improving error tests refs #18869
• src/hg/hubApi/tests/expected/test20.gz
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    fe765adf8b12a7ce73c5290274f3d7c1b204ae0b Wed Apr 10 14:46:35 2019 -0700
    now returning errors properly refs #18869
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    0f08117c738abc8d206ac07f43c50545108c042e Wed Apr 10 15:00:00 2019 -0700
    allow different servers for testing refs #18869
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    5bf541678926a192e843b1dc6da145e0fe3b31cf Thu Apr 11 13:55:51 2019 -0700
    improving error tests refs #18869
• src/hg/hubApi/tests/expected/test25.gz
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    d7e238e3924f048d0964a95a276b03e23c6bdeb2 Tue Apr 9 08:32:40 2019 -0700
    adding supported type rmsk refs #18869
• src/hg/hubApi/tests/expected/test26.gz
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    b3403eb665dde90642274e4bc92f4f4a5aa4a576 Mon Apr 8 14:52:25 2019 -0700
    add test for genePred and PSL track types refs #18869
• src/hg/hubApi/tests/expected/test27.gz
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    b3403eb665dde90642274e4bc92f4f4a5aa4a576 Mon Apr 8 14:52:25 2019 -0700
    add test for genePred and PSL track types refs #18869
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    d7e238e3924f048d0964a95a276b03e23c6bdeb2 Tue Apr 9 08:32:40 2019 -0700
    adding supported type rmsk refs #18869
• src/hg/hubApi/tests/expected/test28.gz
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    d7e238e3924f048d0964a95a276b03e23c6bdeb2 Tue Apr 9 08:32:40 2019 -0700
    adding supported type rmsk refs #18869
• src/hg/hubApi/tests/expected/test29.gz
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    e8bc6082872e9d16854282dd7affdc703b736023 Tue Apr 9 13:43:48 2019 -0700
    add sample getData for superTrack child refs #18869
• src/hg/hubApi/tests/expected/test3.gz
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    aa2b841506a4ac562f3d054440caf4293ff3ef5a Tue Apr 9 15:24:45 2019 -0700
    adding trackLeavesOnly refs #18869
• src/hg/hubApi/tests/expected/test30.gz
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    aa2b841506a4ac562f3d054440caf4293ff3ef5a Tue Apr 9 15:24:45 2019 -0700
    adding trackLeavesOnly refs #18869
• src/hg/hubApi/tests/expected/test31.gz
  • lines changed 0, context: html, text, full: html, text
    aa2b841506a4ac562f3d054440caf4293ff3ef5a Tue Apr 9 15:24:45 2019 -0700
    adding trackLeavesOnly refs #18869
• src/hg/hubApi/tests/expected/test32.gz
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    2ca8c68595f3a083a0b6032ead19f6621529c4a2 Thu Apr 11 13:52:30 2019 -0700
    adding error testing refs #18869
• src/hg/hubApi/tests/expected/test33.gz
  • lines changed 0, context: html, text, full: html, text
    2ca8c68595f3a083a0b6032ead19f6621529c4a2 Thu Apr 11 13:52:30 2019 -0700
    adding error testing refs #18869
• src/hg/hubApi/tests/expected/test34.gz
  • lines changed 0, context: html, text, full: html, text
    2ca8c68595f3a083a0b6032ead19f6621529c4a2 Thu Apr 11 13:52:30 2019 -0700
    adding error testing refs #18869
• src/hg/hubApi/tests/expected/test35.gz
  • lines changed 0, context: html, text, full: html, text
    2ca8c68595f3a083a0b6032ead19f6621529c4a2 Thu Apr 11 13:52:30 2019 -0700
    adding error testing refs #18869
• src/hg/hubApi/tests/expected/test36.gz
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    2ca8c68595f3a083a0b6032ead19f6621529c4a2 Thu Apr 11 13:52:30 2019 -0700
    adding error testing refs #18869
• src/hg/hubApi/tests/expected/test37.gz
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    2ca8c68595f3a083a0b6032ead19f6621529c4a2 Thu Apr 11 13:52:30 2019 -0700
    adding error testing refs #18869
• src/hg/hubApi/tests/expected/test38.gz
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    2ca8c68595f3a083a0b6032ead19f6621529c4a2 Thu Apr 11 13:52:30 2019 -0700
    adding error testing refs #18869
• src/hg/hubApi/tests/jsonConsumer.pl
  • lines changed 11, context: html, text, full: html, text
    37b3bb1e0947b7ded663b992b1cded3c0ac784fb Tue Apr 9 15:26:25 2019 -0700
    adding trackLeavesOnly refs #18869
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    040e01004d8a558fc6d713141368a6393d022198 Wed Apr 10 14:46:54 2019 -0700
    now returning errors properly refs #18869
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    6827319273ffcfb7a42e9fe2a5cd1497fb5fd913 Wed Apr 10 15:15:08 2019 -0700
    eliminate registrationTime which may be different on other SQL servers refs #18869
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    c2d1cd482978db6bc12bafddc72e4131c3d15b9f Thu Apr 11 13:57:56 2019 -0700
    allow errors in parameters to pass thru to the call refs #18869
• src/hg/hubApi/tests/makefile
  • lines changed 19, context: html, text, full: html, text
    0222476b54fcfb70acb694f9819c9fbcbbeea7f8 Tue Apr 9 08:31:05 2019 -0700
    adding supported type rmsk refs #18869
  • lines changed 7, context: html, text, full: html, text
    e8bc6082872e9d16854282dd7affdc703b736023 Tue Apr 9 13:43:48 2019 -0700
    add sample getData for superTrack child refs #18869
  • lines changed 17, context: html, text, full: html, text
    aa2b841506a4ac562f3d054440caf4293ff3ef5a Tue Apr 9 15:24:45 2019 -0700
    adding trackLeavesOnly refs #18869
  • lines changed 4, context: html, text, full: html, text
    fe765adf8b12a7ce73c5290274f3d7c1b204ae0b Wed Apr 10 14:46:35 2019 -0700
    now returning errors properly refs #18869
  • lines changed 2, context: html, text, full: html, text
    0f08117c738abc8d206ac07f43c50545108c042e Wed Apr 10 15:00:00 2019 -0700
    allow different servers for testing refs #18869
  • lines changed 44, context: html, text, full: html, text
    2ca8c68595f3a083a0b6032ead19f6621529c4a2 Thu Apr 11 13:52:30 2019 -0700
    adding error testing refs #18869
• src/hg/makeDb/trackDb/axolotl/ambMex2/description.html
  • lines changed 64, context: html, text, full: html, text
    58434a421c232372963681586e500ae0c0c97a18 Fri Apr 12 22:49:48 2019 -0700
    adding ambMex2 to the browser no redmine
• src/hg/makeDb/trackDb/axolotl/ambMex2/gap.html
  • lines changed 30, context: html, text, full: html, text
    58434a421c232372963681586e500ae0c0c97a18 Fri Apr 12 22:49:48 2019 -0700
    adding ambMex2 to the browser no redmine
• src/hg/makeDb/trackDb/axolotl/ambMex2/gold.html
  • lines changed 34, context: html, text, full: html, text
    58434a421c232372963681586e500ae0c0c97a18 Fri Apr 12 22:49:48 2019 -0700
    adding ambMex2 to the browser no redmine
• src/hg/makeDb/trackDb/axolotl/ambMex2/trackDb.ra
  • lines changed 8, context: html, text, full: html, text
    58434a421c232372963681586e500ae0c0c97a18 Fri Apr 12 22:49:48 2019 -0700
    adding ambMex2 to the browser no redmine
• src/hg/makeDb/trackDb/makefile
  • lines changed 1, context: html, text, full: html, text
    58434a421c232372963681586e500ae0c0c97a18 Fri Apr 12 22:49:48 2019 -0700
    adding ambMex2 to the browser no redmine
• src/utils/qa/weeklybld/buildEnv.csh
  • lines changed 2, context: html, text, full: html, text
    29190ca6a0c7c40c83a1142f4cebe423fbccf445 Mon Apr 15 09:54:47 2019 -0700
    v381 preview1, refs #23203