File Changes for max

v391_preview to v391_preview2 (2019-11-11 to 2019-11-18) v391

• src/hg/htdocs/goldenPath/help/mirrorManual.html
  • lines changed 277, context: html, text, full: html, text
    00b2f1735da9411ea98dc42bf7bf472aaf39052d Mon Nov 18 08:41:51 2019 -0800
    updating mirror manual, refs #24496
• src/hg/lib/jksql.c
  • lines changed 5, context: html, text, full: html, text
    ef4d994bb54291e4fa00210a4bb21fc16a53e976 Tue Nov 12 05:57:47 2019 -0800
    trying to improve error message when mysql server cannot be connected to, refs #24452
• src/hg/makeDb/avada/avada.as
  • lines changed 1, context: html, text, full: html, text
    7332b44765b8b790129d59cf56b466f8d3ecb3e5 Tue Nov 12 05:22:40 2019 -0800
    fixing avada table description
• src/hg/makeDb/trackDb/human/hg19/trackDb.ra
  • lines changed 104, context: html, text, full: html, text
    d3cfdd5bed4bdb1adb44e8b535e99b82d4ad6b88 Mon Nov 18 06:09:47 2019 -0800
    more children for the "special regions" tracks, refs #24245
• src/product/mirrorManual.txt
  • lines changed 87, context: html, text, full: html, text
    00b2f1735da9411ea98dc42bf7bf472aaf39052d Mon Nov 18 08:41:51 2019 -0800
    updating mirror manual, refs #24496
• src/utils/chromToUcsc/chromToUcsc
  • lines changed 34, context: html, text, full: html, text
    9d1979a4f98e25cc266d29e1139dd515d11d3e61 Wed Nov 13 05:30:48 2019 -0800
    removing a feature (data stored in script itself) entirely as it was confusing, refs #24432
  • lines changed 6, context: html, text, full: html, text
    85c51face300add10b745269401ffbdd632fe750 Mon Nov 18 05:18:46 2019 -0800
    fixing chromToUcsc, once more, the download --get example didn't work anymore, refs #24407
• src/utils/chromToUcsc/hg19.chromAlias.tsv
  • lines changed 890, context: html, text, full: html, text
    9d1979a4f98e25cc266d29e1139dd515d11d3e61 Wed Nov 13 05:30:48 2019 -0800
    removing a feature (data stored in script itself) entirely as it was confusing, refs #24432
• src/utils/chromToUcsc/hg38.chromAlias.tsv
  • lines changed 1785, context: html, text, full: html, text
    9d1979a4f98e25cc266d29e1139dd515d11d3e61 Wed Nov 13 05:30:48 2019 -0800
    removing a feature (data stored in script itself) entirely as it was confusing, refs #24432
• src/utils/chromToUcsc/makefile
  • lines changed 2, context: html, text, full: html, text
    9d1979a4f98e25cc266d29e1139dd515d11d3e61 Wed Nov 13 05:30:48 2019 -0800
    removing a feature (data stored in script itself) entirely as it was confusing, refs #24432
  • lines changed 2, context: html, text, full: html, text
    003005fd8409969f6c109853b511afe1f3c163cb Thu Nov 14 02:13:58 2019 -0800
    changes after code review, refs #24465
• src/utils/chromToUcsc/tests/hg19.chromAlias.tsv
  • lines changed 890, context: html, text, full: html, text
    9d1979a4f98e25cc266d29e1139dd515d11d3e61 Wed Nov 13 05:30:48 2019 -0800
    removing a feature (data stored in script itself) entirely as it was confusing, refs #24432
• src/utils/chromToUcsc/tests/hg38.chromAlias.tsv
  • lines changed 1785, context: html, text, full: html, text
    9d1979a4f98e25cc266d29e1139dd515d11d3e61 Wed Nov 13 05:30:48 2019 -0800
    removing a feature (data stored in script itself) entirely as it was confusing, refs #24432
  • lines changed 1785, context: html, text, full: html, text
    003005fd8409969f6c109853b511afe1f3c163cb Thu Nov 14 02:13:58 2019 -0800
    changes after code review, refs #24465
• src/utils/chromToUcsc/tests/makefile
  • lines changed 4, context: html, text, full: html, text
    c9e0427feeb5463fcb0a7a508a6ed3eb2480d4b4 Tue Nov 12 13:16:27 2019 +0100
    adding py2/py3 tests to chromFixer, refs #24432
  • lines changed 4, context: html, text, full: html, text
    9d1979a4f98e25cc266d29e1139dd515d11d3e61 Wed Nov 13 05:30:48 2019 -0800
    removing a feature (data stored in script itself) entirely as it was confusing, refs #24432
  • lines changed 5, context: html, text, full: html, text
    79ea010a691b96b7cc3850b87664e1ed3b266db3 Wed Nov 13 05:36:49 2019 -0800
    Removing warning message from makefile, refs #24432
  • lines changed 5, context: html, text, full: html, text
    003005fd8409969f6c109853b511afe1f3c163cb Thu Nov 14 02:13:58 2019 -0800
    changes after code review, refs #24465