Commits for markd

v398_preview to v398_preview2 (2020-04-27 to 2020-05-04) v398

f5183290e802b44254b3b4d381f369cee8390fca Wed Apr 29 11:09:57 2020 -0700

• moved gencode track doc to their own files for mm10 and hg19 as it is overwhelming the main file
  • src/hg/makeDb/doc/hg19.gencode.txt - lines changed 681, context: html, text, full: html, text
  • src/hg/makeDb/doc/hg19.txt - lines changed 735, context: html, text, full: html, text
  • src/hg/makeDb/doc/mm10.gencode.txt - lines changed 954, context: html, text, full: html, text
  • src/hg/makeDb/doc/mm10.txt - lines changed 954, context: html, text, full: html, text

577c7537344e58f1538843f38e084f6e175b5ca3 Wed Apr 29 11:34:27 2020 -0700

• fix warning: suggest parentheses around ‘&&’ within ‘||’ [-Werror=parentheses]
  • src/hg/hgTracks/bigBedTrack.c - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV34.html - lines changed 1, context: html, text, full: html, text

b985a10e714b3fad02117a0eeba5a6b36bd0ca59 Wed Apr 29 12:53:43 2020 -0700

• loaded gencodeV34 final release
  • src/hg/makeDb/doc/hg38/gencode.txt - lines changed 7, context: html, text, full: html, text
  • src/hg/makeDb/outside/gencode/gencodeLoad.mk - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeSuper.html - lines changed 4, context: html, text, full: html, text

7bd8c4f2fd1c56e7bb81ac0235944ab82cfabaea Wed Apr 29 13:46:43 2020 -0700

• import of GENCODE VM25
  • src/hg/makeDb/doc/mm10.gencode.txt - lines changed 7, context: html, text, full: html, text
  • src/hg/makeDb/outside/gencode/gencodeLoad.mk - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm10/wgEncodeGencodeSuper.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm10/wgEncodeGencodeVM25.html - lines changed 1, context: html, text, full: html, text

8449958c66006a38a4515b46ad1e78d7f7f6ad81 Wed Apr 29 14:53:20 2020 -0700

• import of GENCODE 34lift37
  • src/hg/makeDb/doc/hg19.gencode.txt - lines changed 7, context: html, text, full: html, text
  • src/hg/makeDb/outside/gencode/gencodeLoad.mk - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/schema/all.joiner - lines changed 91, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeSuper.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV34lift37.html - lines changed 32, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV34lift37.ra - lines changed 224, context: html, text, full: html, text

c5eb3af1ec48ee4d40c32d26c3486f1e60658b7b Wed Apr 29 15:45:09 2020 -0700

• forgot to include .ra file
  • src/hg/makeDb/trackDb/human/hg19/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text