Commits for braney

v423_base to v424_preview (2021-11-09 to 2021-11-15) v424

15973bdabacf5ddf5dd9289d05e83a7cd4080dbb Tue Nov 9 09:12:48 2021 -0800

• support for bigRmsk from Robert Hubley robert.hubley@isbscience.org
  • src/hg/hgTracks/bigRmskTrack.c - lines changed 1681, context: html, text, full: html, text
  • src/hg/hgTracks/hgTracks.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgTracks/hgTracks.h - lines changed 4, context: html, text, full: html, text
  • src/hg/hgTracks/makefile - lines changed 1, context: html, text, full: html, text
  • src/hg/hgTracks/simpleTracks.c - lines changed 7, context: html, text, full: html, text
  • src/hg/hgc/bigRmskClick.c - lines changed 368, context: html, text, full: html, text
  • src/hg/hgc/hgc.c - lines changed 4, context: html, text, full: html, text
  • src/hg/hgc/hgc.h - lines changed 1, context: html, text, full: html, text
  • src/hg/hgc/makefile - lines changed 1, context: html, text, full: html, text
  • src/hg/hubApi/apiUtils.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hubApi/hubApi.c - lines changed 2, context: html, text, full: html, text
  • src/hg/inc/bigRmskUi.h - lines changed 29, context: html, text, full: html, text
  • src/hg/inc/trackDb.h - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/customFactory.c - lines changed 19, context: html, text, full: html, text
  • src/hg/lib/hui.c - lines changed 26, context: html, text, full: html, text
  • src/hg/lib/trackDbCustom.c - lines changed 3, context: html, text, full: html, text
  • src/hg/lib/trackHub.c - lines changed 4, context: html, text, full: html, text

b5c461e5c49abf9eb5a708e2b63243555b2362da Wed Nov 10 18:05:28 2021 -0800

• first cut at a sequence logo track, also some makeDoc for gene tracks
  • src/hg/hgTracks/wigTrack.c - lines changed 299, context: html, text, full: html, text
  • src/hg/makeDb/doc/ucscGenes/hg38.gencodeV39.sh - lines changed 10, context: html, text, full: html, text
  • src/hg/makeDb/doc/ucscGenes/mm39.gencodeVM28.sh - lines changed 10, context: html, text, full: html, text

36650b61875fa047f2c9ebc3657d1a9d10ec77e6 Fri Nov 12 14:42:17 2021 -0800

• Give developers a way to map sequence names to labels in maf display refs #28495
  • src/hg/hgTracks/wigMafTrack.c - lines changed 17, context: html, text, full: html, text
  • src/hg/hgc/hgc.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgc/mafClick.c - lines changed 6, context: html, text, full: html, text
  • src/hg/inc/hgMaf.h - lines changed 4, context: html, text, full: html, text
  • src/hg/lib/hgMaf.c - lines changed 13, context: html, text, full: html, text