File Changes for jcasper

v430_preview to v430_preview2 (2022-04-11 to 2022-04-18) v430

• src/hg/hgCustom/hgCustom.c
  • lines changed 1, context: html, text, full: html, text
    75947df74b1d3b4e6e0973704cce6482d1ee814f Fri Apr 15 11:34:48 2022 -0700
    Fixing broken link; hic docs are now on a separate page - no ticket
• src/hg/hgTrackUi/hgTrackUi.c
  • lines changed 2, context: html, text, full: html, text
    e199edebab9458a3b535bb2d0e32c52167d8fdae Fri Apr 15 14:09:59 2022 -0700
    Adding pack/squish to hic tracks, plus interaction distance filters. refs #29280
• src/hg/hgTracks/hicTrack.c
  • lines changed 59, context: html, text, full: html, text
    e199edebab9458a3b535bb2d0e32c52167d8fdae Fri Apr 15 14:09:59 2022 -0700
    Adding pack/squish to hic tracks, plus interaction distance filters. refs #29280
• src/hg/hgTracks/simpleTracks.c
  • lines changed 1, context: html, text, full: html, text
    e199edebab9458a3b535bb2d0e32c52167d8fdae Fri Apr 15 14:09:59 2022 -0700
    Adding pack/squish to hic tracks, plus interaction distance filters. refs #29280
• src/hg/htdocs/goldenPath/newsarch.html
  • lines changed 66, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/htdocs/images/singleCell/singleCellMerged.png
  • lines changed 0, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/htdocs/indexNews.html
  • lines changed 8, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/inc/hicUi.h
  • lines changed 12, context: html, text, full: html, text
    e199edebab9458a3b535bb2d0e32c52167d8fdae Fri Apr 15 14:09:59 2022 -0700
    Adding pack/squish to hic tracks, plus interaction distance filters. refs #29280
• src/hg/lib/hicUi.c
  • lines changed 42, context: html, text, full: html, text
    e199edebab9458a3b535bb2d0e32c52167d8fdae Fri Apr 15 14:09:59 2022 -0700
    Adding pack/squish to hic tracks, plus interaction distance filters. refs #29280
  • lines changed 10, context: html, text, full: html, text
    1d677ef02ee511f17c526869d9d058158771f6dc Fri Apr 15 17:15:05 2022 -0700
    Enforcing non-negative values for hicDistanceMin and hicDistanceMax, refs #29280
• src/hg/lib/trackDbCustom.c
  • lines changed 1, context: html, text, full: html, text
    e199edebab9458a3b535bb2d0e32c52167d8fdae Fri Apr 15 14:09:59 2022 -0700
    Adding pack/squish to hic tracks, plus interaction distance filters. refs #29280
• src/hg/makeDb/doc/hg38/hg38.txt
  • lines changed 24, context: html, text, full: html, text
    8102c8c2b15180f3e48534af65f117ac467c4505 Thu Apr 14 16:00:15 2022 -0700
    Makedoc for initial DECIPHER build on hg38, refs #29130
• src/hg/makeDb/doc/hg38/singleCell.txt
  • lines changed 83, context: html, text, full: html, text
    c164fcc4428454a539e9226d343b2f7f6373ecce Mon Apr 11 13:26:42 2022 -0700
    Initial makedoc for single cell merged track on hg38, plus update to trackDb entry, refs #28062
• src/hg/makeDb/trackDb/human/hg38/bloodHao.ra
  • lines changed 1, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/makeDb/trackDb/human/hg38/colonWang.ra
  • lines changed 1, context: html, text, full: html, text
    c164fcc4428454a539e9226d343b2f7f6373ecce Mon Apr 11 13:26:42 2022 -0700
    Initial makedoc for single cell merged track on hg38, plus update to trackDb entry, refs #28062
  • lines changed 1, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/makeDb/trackDb/human/hg38/cortexVelmeshev.ra
  • lines changed 1, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/makeDb/trackDb/human/hg38/fetalGeneAtlas.ra
  • lines changed 1, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/makeDb/trackDb/human/hg38/heartCellAtlas.ra
  • lines changed 1, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/makeDb/trackDb/human/hg38/ileumWang.ra
  • lines changed 1, context: html, text, full: html, text
    c164fcc4428454a539e9226d343b2f7f6373ecce Mon Apr 11 13:26:42 2022 -0700
    Initial makedoc for single cell merged track on hg38, plus update to trackDb entry, refs #28062
  • lines changed 1, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/makeDb/trackDb/human/hg38/liverMacParland.ra
  • lines changed 1, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/makeDb/trackDb/human/hg38/lungTravaglini2020.ra
  • lines changed 1, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/makeDb/trackDb/human/hg38/muscleDeMicheli.ra
  • lines changed 1, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/makeDb/trackDb/human/hg38/pancreasBaron.ra
  • lines changed 1, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/makeDb/trackDb/human/hg38/placentaVentoTormo.ra
  • lines changed 1, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/makeDb/trackDb/human/hg38/rectumWang.ra
  • lines changed 1, context: html, text, full: html, text
    c164fcc4428454a539e9226d343b2f7f6373ecce Mon Apr 11 13:26:42 2022 -0700
    Initial makedoc for single cell merged track on hg38, plus update to trackDb entry, refs #28062
  • lines changed 1, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/makeDb/trackDb/human/hg38/singleCellMerged.ra
  • lines changed 6, context: html, text, full: html, text
    c164fcc4428454a539e9226d343b2f7f6373ecce Mon Apr 11 13:26:42 2022 -0700
    Initial makedoc for single cell merged track on hg38, plus update to trackDb entry, refs #28062
  • lines changed 2, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/makeDb/trackDb/human/hg38/skinSoleBoldo.ra
  • lines changed 1, context: html, text, full: html, text
    ee94193b5dde0c82d298205d0976617f70759a79 Wed Apr 13 17:00:58 2022 -0700
    Removing pennants for single cell tracks, adding penant to single cell merged, and adding a placeholder news post for the release of the single cell merged track, refs #28062
• src/hg/makeDb/trackDb/tagTypes.tab
  • lines changed 2, context: html, text, full: html, text
    efb0ef00c7d06d1eb805f4fc6619342344c7c715 Fri Apr 15 14:11:11 2022 -0700
    Adding tdb variables for default hic interaction distance filters, refs #29280