All File Changes
v492_preview to v492_preview2 (2025-12-01 to 2025-12-08) v492
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- confs/asia.hg.conf
- lines changed 3, context: html, text, full: html, text
14b0f6b564ca152fe006f81589b7dba1966cb9d5 Sun Dec 7 01:11:19 2025 -0800
Installing updated hg.conf files from UCSC servers
- confs/euro.hg.conf
- lines changed 3, context: html, text, full: html, text
14b0f6b564ca152fe006f81589b7dba1966cb9d5 Sun Dec 7 01:11:19 2025 -0800
Installing updated hg.conf files from UCSC servers
- confs/hgwbeta.hg.conf
- lines changed 1, context: html, text, full: html, text
14b0f6b564ca152fe006f81589b7dba1966cb9d5 Sun Dec 7 01:11:19 2025 -0800
Installing updated hg.conf files from UCSC servers
- confs/hgwdev.hg.conf
- lines changed 1, context: html, text, full: html, text
14b0f6b564ca152fe006f81589b7dba1966cb9d5 Sun Dec 7 01:11:19 2025 -0800
Installing updated hg.conf files from UCSC servers
- confs/rr.hg.conf
- lines changed 3, context: html, text, full: html, text
14b0f6b564ca152fe006f81589b7dba1966cb9d5 Sun Dec 7 01:11:19 2025 -0800
Installing updated hg.conf files from UCSC servers
- docs/gb101.html
- lines changed 118, context: html, text, full: html, text
82b12a5fae1c82dffe13401e09749849d116e724 Fri Dec 5 17:27:44 2025 -0800
Making major changes to the markdown /docs/ directory since we are going to keep adding to it. Starting with adding more heirarchy, also had to update the makefile and staticPage.lua to reference the correct root path for the CSS. Also had to update all of the relative links in the pages so far in order to make them absolute paths for easier implementation. Lastly, adding the new hubBasics page which is the first in the new hubs subdir. Refs #28347
- docs/hubs/hubBasics.md
- lines changed 331, context: html, text, full: html, text
82b12a5fae1c82dffe13401e09749849d116e724 Fri Dec 5 17:27:44 2025 -0800
Making major changes to the markdown /docs/ directory since we are going to keep adding to it. Starting with adding more heirarchy, also had to update the makefile and staticPage.lua to reference the correct root path for the CSS. Also had to update all of the relative links in the pages so far in order to make them absolute paths for easier implementation. Lastly, adding the new hubBasics page which is the first in the new hubs subdir. Refs #28347
- docs/index.md
- lines changed 13, context: html, text, full: html, text
1b7e3e5a0cac8f9cfe7257f16582c06d25187926 Fri Dec 5 17:38:13 2025 -0800
Basic placeholder for new landing page, refs #28347
- docs/makefile
- lines changed 30, context: html, text, full: html, text
82b12a5fae1c82dffe13401e09749849d116e724 Fri Dec 5 17:27:44 2025 -0800
Making major changes to the markdown /docs/ directory since we are going to keep adding to it. Starting with adding more heirarchy, also had to update the makefile and staticPage.lua to reference the correct root path for the CSS. Also had to update all of the relative links in the pages so far in order to make them absolute paths for easier implementation. Lastly, adding the new hubBasics page which is the first in the new hubs subdir. Refs #28347
- docs/new_home.html
- lines changed 103, context: html, text, full: html, text
82b12a5fae1c82dffe13401e09749849d116e724 Fri Dec 5 17:27:44 2025 -0800
Making major changes to the markdown /docs/ directory since we are going to keep adding to it. Starting with adding more heirarchy, also had to update the makefile and staticPage.lua to reference the correct root path for the CSS. Also had to update all of the relative links in the pages so far in order to make them absolute paths for easier implementation. Lastly, adding the new hubBasics page which is the first in the new hubs subdir. Refs #28347
- docs/staticPage.html
- lines changed 10, context: html, text, full: html, text
82b12a5fae1c82dffe13401e09749849d116e724 Fri Dec 5 17:27:44 2025 -0800
Making major changes to the markdown /docs/ directory since we are going to keep adding to it. Starting with adding more heirarchy, also had to update the makefile and staticPage.lua to reference the correct root path for the CSS. Also had to update all of the relative links in the pages so far in order to make them absolute paths for easier implementation. Lastly, adding the new hubBasics page which is the first in the new hubs subdir. Refs #28347
- docs/staticPage.lua
- lines changed 1, context: html, text, full: html, text
82b12a5fae1c82dffe13401e09749849d116e724 Fri Dec 5 17:27:44 2025 -0800
Making major changes to the markdown /docs/ directory since we are going to keep adding to it. Starting with adding more heirarchy, also had to update the makefile and staticPage.lua to reference the correct root path for the CSS. Also had to update all of the relative links in the pages so far in order to make them absolute paths for easier implementation. Lastly, adding the new hubBasics page which is the first in the new hubs subdir. Refs #28347
- docs/tutorials/gatewayTutorial.md
- lines changed 13, context: html, text, full: html, text
82b12a5fae1c82dffe13401e09749849d116e724 Fri Dec 5 17:27:44 2025 -0800
Making major changes to the markdown /docs/ directory since we are going to keep adding to it. Starting with adding more heirarchy, also had to update the makefile and staticPage.lua to reference the correct root path for the CSS. Also had to update all of the relative links in the pages so far in order to make them absolute paths for easier implementation. Lastly, adding the new hubBasics page which is the first in the new hubs subdir. Refs #28347
- docs/tutorials/gb101.md
- lines changed 22, context: html, text, full: html, text
82b12a5fae1c82dffe13401e09749849d116e724 Fri Dec 5 17:27:44 2025 -0800
Making major changes to the markdown /docs/ directory since we are going to keep adding to it. Starting with adding more heirarchy, also had to update the makefile and staticPage.lua to reference the correct root path for the CSS. Also had to update all of the relative links in the pages so far in order to make them absolute paths for easier implementation. Lastly, adding the new hubBasics page which is the first in the new hubs subdir. Refs #28347
- docs/tutorials/index.md
- lines changed 0, context: html, text, full: html, text
82b12a5fae1c82dffe13401e09749849d116e724 Fri Dec 5 17:27:44 2025 -0800
Making major changes to the markdown /docs/ directory since we are going to keep adding to it. Starting with adding more heirarchy, also had to update the makefile and staticPage.lua to reference the correct root path for the CSS. Also had to update all of the relative links in the pages so far in order to make them absolute paths for easier implementation. Lastly, adding the new hubBasics page which is the first in the new hubs subdir. Refs #28347
- docs/tutorials/tableBrowserTutorial.md
- lines changed 9, context: html, text, full: html, text
82b12a5fae1c82dffe13401e09749849d116e724 Fri Dec 5 17:27:44 2025 -0800
Making major changes to the markdown /docs/ directory since we are going to keep adding to it. Starting with adding more heirarchy, also had to update the makefile and staticPage.lua to reference the correct root path for the CSS. Also had to update all of the relative links in the pages so far in order to make them absolute paths for easier implementation. Lastly, adding the new hubBasics page which is the first in the new hubs subdir. Refs #28347
- src/hg/cgilib/haplotypes.c
- lines changed 1, context: html, text, full: html, text
ef1483b9dbef46e678f0e4d95f70bdeb61951b18 Thu Dec 4 10:57:38 2025 -0800
fixes population button in common haplotype section in hgGene
- src/hg/hgGateway/hgGateway.html
- lines changed 3, context: html, text, full: html, text
bb36bf5df3f8ac20e6686d133a53f427ccd05721 Wed Dec 3 16:10:08 2025 -0800
Add link to position search box examples page to hgSearch and hgGateway, refs #35336
- src/hg/hgGene/hgGene.c
- lines changed 10, context: html, text, full: html, text
d430ed42b69dc955443169c3ea4f4157ff66fe84 Thu Dec 4 10:50:24 2025 -0800
get default hidden hgGene sections to open properly
- src/hg/hgGene/hgGeneData/Human/hg19/section.ra
- lines changed 1, context: html, text, full: html, text
1ffc37d2d2a54bf74b983443c28b26edf105c288 Tue Dec 2 16:38:36 2025 -0800
turn gene alleles on by default
- lines changed 1, context: html, text, full: html, text
c18e63286391967a0ff9ad129a1a5126f3e73b84 Thu Dec 4 10:51:53 2025 -0800
Revert "turn gene alleles on by default"
This reverts commit 1ffc37d2d2a54bf74b983443c28b26edf105c288.
- src/hg/hgSearch/hgSearch.c
- lines changed 8, context: html, text, full: html, text
9266c869b3ff3f5829cd406e11a1315a6822d565 Thu Dec 4 12:28:41 2025 -0800
When doing an HGVS search that is not from the auto-suggestions, if the term resolves, save it to the search stack so it will show up in the recent searches list, refs #35984
- src/hg/hgTables/filterFields.c
- lines changed 5, context: html, text, full: html, text
518ff4cfa71efd85556346f2d01a24f88a773aa9 Tue Dec 2 17:13:33 2025 -0800
Fixes missing field descriptions for mm39 knownGene. fixes #32209
- src/hg/hgTables/mainPage.c
- lines changed 3, context: html, text, full: html, text
88f3a1a6fe7166978044b5929316f75448643734 Fri Dec 5 14:41:40 2025 -0800
Jonathan code review. Not wanting to have to add a list of exceptional tables. Restoring original line from Brian Raney. refs #36784,#36524
- src/hg/hgTables/pal.c
- lines changed 1, context: html, text, full: html, text
22d5ed169d378a1fbc1b5f76488771be106c9b1f Wed Dec 3 17:19:19 2025 -0800
Allows bigGenePred to used like genePred and provide CDS FASTA output from Table Browser. fixes #34712
- src/hg/hgTracks/bigBedTrack.c
- lines changed 4, context: html, text, full: html, text
141f698576f7b9f88861d533c847a93153b39d05 Wed Dec 3 19:52:35 2025 -0800
Feeback from Code review with Jonathan, fixes hgFindMatches for loadGV. refs #36738
- src/hg/hgTracks/hgTracks.c
- lines changed 1, context: html, text, full: html, text
1a2aef3c877e9a8e365da31b63acde9032bd01bc Wed Dec 3 12:50:09 2025 -0800
Make gene alleles section of hgGene show up when doing hgGene in a pop up, refs #36770
- lines changed 3, context: html, text, full: html, text
141f698576f7b9f88861d533c847a93153b39d05 Wed Dec 3 19:52:35 2025 -0800
Feeback from Code review with Jonathan, fixes hgFindMatches for loadGV. refs #36738
- src/hg/hgTracks/hgTracks.h
- lines changed 2, context: html, text, full: html, text
141f698576f7b9f88861d533c847a93153b39d05 Wed Dec 3 19:52:35 2025 -0800
Feeback from Code review with Jonathan, fixes hgFindMatches for loadGV. refs #36738
- src/hg/hgTracks/simpleTracks.c
- lines changed 4, context: html, text, full: html, text
141f698576f7b9f88861d533c847a93153b39d05 Wed Dec 3 19:52:35 2025 -0800
Feeback from Code review with Jonathan, fixes hgFindMatches for loadGV. refs #36738
- src/hg/hgc/togaClick.c
- lines changed 71, context: html, text, full: html, text
ffab4ecbdda06b66cf091326108670702e498d0e Fri Dec 5 11:16:22 2025 -0800
new toga click code from Michaerl Hiller for version 2 TOGA refs #35776
- src/hg/hgc/togaClick.h
- lines changed 5, context: html, text, full: html, text
ffab4ecbdda06b66cf091326108670702e498d0e Fri Dec 5 11:16:22 2025 -0800
new toga click code from Michaerl Hiller for version 2 TOGA refs #35776
- src/hg/htdocs/goldenPath/help/hgTrackHubHelp.html
- lines changed 2, context: html, text, full: html, text
b653d5ce539938ef5135e8650f922c5ec7f9ad5e Fri Dec 5 15:18:44 2025 -0800
adding link to orderKey form trackDb docs; adding id to orderKey element and removing repetitive text in track hub help, refs #25243
- src/hg/htdocs/goldenPath/help/mirrorManual.html
- lines changed 2, context: html, text, full: html, text
89c69500ae6ce997047f59a264c6a9327aaef8d2 Fri Dec 5 03:27:09 2025 -0800
small update to build instructions, no redmine
- src/hg/htdocs/goldenPath/help/oligoMatch.html
- lines changed 123, context: html, text, full: html, text
83fd535ffd08aac398121175c71d9b9554c0eee1 Thu Dec 4 10:51:30 2025 -0800
adding a few example motifs to short match track, no redmine
- src/hg/htdocs/goldenPath/help/trackDb/trackDbHub.v3.html
- lines changed 1, context: html, text, full: html, text
b653d5ce539938ef5135e8650f922c5ec7f9ad5e Fri Dec 5 15:18:44 2025 -0800
adding link to orderKey form trackDb docs; adding id to orderKey element and removing repetitive text in track hub help, refs #25243
- src/hg/htdocs/goldenPath/newsarch.html
- lines changed 31, context: html, text, full: html, text
59fb440ba930a3f0eaee0af6e7fe6a2526b10551 Wed Dec 3 11:49:31 2025 -0800
More updates to gnomadMpc.html and releasing/announcing the hg19 gnomAD MPC track, refs #36531
- lines changed 2, context: html, text, full: html, text
e7e1e5f0e9e4e242f19f4e04856c94574cbec7a7 Wed Dec 3 13:26:29 2025 -0800
An edit to the gnomAD MPC newsarch, refs #36531
- lines changed 50, context: html, text, full: html, text
68ea606bd8b97ea67c4a1dfd558fbb8f8b1c5a69 Thu Dec 4 16:10:26 2025 -0800
Staging the announcement for hubSpace. Commenting the announcement out until hubTools is released, refs #36290
- src/hg/htdocs/images/newsArchImages/gnomAD_mpc.png
- lines changed 0, context: html, text, full: html, text
59fb440ba930a3f0eaee0af6e7fe6a2526b10551 Wed Dec 3 11:49:31 2025 -0800
More updates to gnomadMpc.html and releasing/announcing the hg19 gnomAD MPC track, refs #36531
- src/hg/htdocs/inc/hgSearch.html
- lines changed 1, context: html, text, full: html, text
bb36bf5df3f8ac20e6686d133a53f427ccd05721 Wed Dec 3 16:10:08 2025 -0800
Add link to position search box examples page to hgSearch and hgGateway, refs #35336
- src/hg/htdocs/indexNews.html
- lines changed 12, context: html, text, full: html, text
59fb440ba930a3f0eaee0af6e7fe6a2526b10551 Wed Dec 3 11:49:31 2025 -0800
More updates to gnomadMpc.html and releasing/announcing the hg19 gnomAD MPC track, refs #36531
- src/hg/htdocs/style/shepherd.css
- lines changed 229, context: html, text, full: html, text
a1247ee4544f573cb20ad82d83cddfadb2f9577d Tue Dec 2 14:47:56 2025 -0800
Feeding the CSS file into Claude so the file is in a more human readible format, refs #34354
- lines changed 5, context: html, text, full: html, text
d78cf5974051daa4a48a8195c8aaf754d4757edb Tue Dec 2 16:11:49 2025 -0800
Adding a new style of button for loading the examples in the hgCustom tutorial. Making it so the button does nothing after clicking it the first time. refs #34354
- lines changed 1, context: html, text, full: html, text
9ce60ff1bd117ef5fe9b3765fdba61c8d68d1159 Tue Dec 2 16:44:39 2025 -0800
Making the optional not italic. Fixing a typo (teh) and adding a paragraph break, refs #34354
- src/hg/inc/web.h
- lines changed 7, context: html, text, full: html, text
d430ed42b69dc955443169c3ea4f4157ff66fe84 Thu Dec 4 10:50:24 2025 -0800
get default hidden hgGene sections to open properly
- src/hg/js/alleles.js
- lines changed 6, context: html, text, full: html, text
1a2aef3c877e9a8e365da31b63acde9032bd01bc Wed Dec 3 12:50:09 2025 -0800
Make gene alleles section of hgGene show up when doing hgGene in a pop up, refs #36770
- src/hg/js/hgTracks.js
- lines changed 1, context: html, text, full: html, text
1a2aef3c877e9a8e365da31b63acde9032bd01bc Wed Dec 3 12:50:09 2025 -0800
Make gene alleles section of hgGene show up when doing hgGene in a pop up, refs #36770
- lines changed 2, context: html, text, full: html, text
8b5388e586385a67f6175b7bcb678342c90cbfae Fri Dec 5 12:25:04 2025 -0800
Prevent toga tracks from doing hgc in popups, refs #36805
- src/hg/js/tutorials/customTrackTutorial.js
- lines changed 97, context: html, text, full: html, text
d78cf5974051daa4a48a8195c8aaf754d4757edb Tue Dec 2 16:11:49 2025 -0800
Adding a new style of button for loading the examples in the hgCustom tutorial. Making it so the button does nothing after clicking it the first time. refs #34354
- lines changed 5, context: html, text, full: html, text
9ce60ff1bd117ef5fe9b3765fdba61c8d68d1159 Tue Dec 2 16:44:39 2025 -0800
Making the optional not italic. Fixing a typo (teh) and adding a paragraph break, refs #34354
- lines changed 5, context: html, text, full: html, text
f0173cf9b2305fab980f47c8ed07f32642c53036 Tue Dec 2 17:03:34 2025 -0800
Disabling the genome selection menu so you aren't taken away from hg19, refs #34354
- lines changed 11, context: html, text, full: html, text
16824517cc89b9acd936de3c17c3c48d64d0afc9 Tue Dec 2 17:15:40 2025 -0800
Disabling hyperlink clicks. Disabling clicking on the results page, refs #34354
- lines changed 22, context: html, text, full: html, text
48e64c1e21d90b822aef8b11a2eabfb44321dd50 Wed Dec 3 16:34:13 2025 -0800
Updating the toggleSelects function to accept a DOM element. Disabling buttons so you aren't taken away from the tutorial by clicking the button it is explaining, refs #34354
- src/hg/js/utils.js
- lines changed 1, context: html, text, full: html, text
002e60c59c18ca1d87c6e980278a0a8a523425a4 Tue Dec 2 12:42:34 2025 -0800
Wait until DOMContentLoaded to convert title tags to mouseovers, because the browserTextSize variable will not be set yet otherwise. Make tooltip text size determination default to 12 if no saved text size or no browserTextSize available yet, refs #36754
- src/hg/lib/hui.c
- lines changed 6, context: html, text, full: html, text
002e60c59c18ca1d87c6e980278a0a8a523425a4 Tue Dec 2 12:42:34 2025 -0800
Wait until DOMContentLoaded to convert title tags to mouseovers, because the browserTextSize variable will not be set yet otherwise. Make tooltip text size determination default to 12 if no saved text size or no browserTextSize available yet, refs #36754
- src/hg/lib/trackDbCustom.c
- lines changed 1, context: html, text, full: html, text
5602c6f4da7d31d02fcf849c6dce1ef329cca3ef Tue Dec 2 12:58:41 2025 -0800
bigBeds with less than five fields with filters should show them on the
hgTrackUi page
- src/hg/lib/trackHub.c
- lines changed 1, context: html, text, full: html, text
9f7cf671abc2cf3179d3fc945129d290d87470ff Wed Dec 3 17:59:58 2025 -0800
Suggested by Jonathan from code review, refs #34544
- src/hg/lib/web.c
- lines changed 20, context: html, text, full: html, text
d430ed42b69dc955443169c3ea4f4157ff66fe84 Thu Dec 4 10:50:24 2025 -0800
get default hidden hgGene sections to open properly
- src/hg/makeDb/doc/asmHubs/mkGenomes.pl
- lines changed 1, context: html, text, full: html, text
a7cc8f8b8547b215cd4d25147e38aea308913b82 Fri Dec 5 17:27:03 2025 -0800
checkin long standing debug print statement
- src/hg/makeDb/doc/hg38/varFreqs.txt
- lines changed 8, context: html, text, full: html, text
676b58d841804f049f720cc9ba3fddec216dae61 Tue Dec 2 06:22:46 2025 -0800
adding saudi arabia to variant frequencies track
- src/hg/makeDb/scripts/saudiToVcf.py
- lines changed 45, context: html, text, full: html, text
676b58d841804f049f720cc9ba3fddec216dae61 Tue Dec 2 06:22:46 2025 -0800
adding saudi arabia to variant frequencies track
- src/hg/makeDb/trackDb/TOGAv2.html
- lines changed 85, context: html, text, full: html, text
18327e879f9df894313dd3100084c94cc6dd4136 Fri Dec 5 11:03:40 2025 -0800
track definitions for TOGA version 2 refs #35776
- src/hg/makeDb/trackDb/human/hg19/gnomadMpc.html
- lines changed 13, context: html, text, full: html, text
971ae4b10f79d994d419c94d932e5b9163b72098 Tue Dec 2 10:39:58 2025 -0800
Updating the Display Conventions and Configuration section for gnomAD MPC, refs #36531
- lines changed 2, context: html, text, full: html, text
b34331f456005e4f28bb0d095c081b50d94f7ebd Tue Dec 2 10:59:48 2025 -0800
Updating the text for the gnomAD MPC, refs #36531
- lines changed 5, context: html, text, full: html, text
59fb440ba930a3f0eaee0af6e7fe6a2526b10551 Wed Dec 3 11:49:31 2025 -0800
More updates to gnomadMpc.html and releasing/announcing the hg19 gnomAD MPC track, refs #36531
- src/hg/makeDb/trackDb/human/hg19/trackDb.gnomad.ra
- lines changed 2, context: html, text, full: html, text
59fb440ba930a3f0eaee0af6e7fe6a2526b10551 Wed Dec 3 11:49:31 2025 -0800
More updates to gnomadMpc.html and releasing/announcing the hg19 gnomAD MPC track, refs #36531
- src/hg/makeDb/trackDb/human/varFreqs.html
- lines changed 23, context: html, text, full: html, text
676b58d841804f049f720cc9ba3fddec216dae61 Tue Dec 2 06:22:46 2025 -0800
adding saudi arabia to variant frequencies track
- src/hg/makeDb/trackDb/human/varFreqs.ra
- lines changed 1, context: html, text, full: html, text
cf0688e553609456a5bcd2968034cb98e37be877 Tue Dec 2 05:16:45 2025 -0800
small updated for Finngen
- src/hg/makeDb/trackDb/mouse/mm10/trackDb.ra
- lines changed 14, context: html, text, full: html, text
7e008fe9bc0fd5adbba182fd74adfc4b8fbd5fca Thu Dec 4 13:46:14 2025 -0800
no need to define HLTOGAannotvsHg38v1 here, it is at the top level refs #35776
- src/hg/makeDb/trackDb/toga2.ra
- lines changed 163, context: html, text, full: html, text
18327e879f9df894313dd3100084c94cc6dd4136 Fri Dec 5 11:03:40 2025 -0800
track definitions for TOGA version 2 refs #35776
- lines changed 1, context: html, text, full: html, text
a419c78d2f26b51f510fcce2f973c94c0c4beb99 Fri Dec 5 11:09:55 2025 -0800
TOGA V2 shortLabel refs #35576
- lines changed 12, context: html, text, full: html, text
6b57700763a45c9826c241399e125d1b4c25b8cb Sun Dec 7 22:08:27 2025 -0800
everything for toga2 shoiuld be in /TOGAv2/ directory under gbdb refs #35776
- src/hg/makeDb/trackDb/trackDb.ra
- lines changed 2, context: html, text, full: html, text
18327e879f9df894313dd3100084c94cc6dd4136 Fri Dec 5 11:03:40 2025 -0800
track definitions for TOGA version 2 refs #35776
- src/hg/utils/automation/asmHubTrackDb.sh
- lines changed 10, context: html, text, full: html, text
16311d16d3c24281f59bcba6d8c4e6b548cd6ad1 Tue Dec 2 12:09:52 2025 -0800
on advice from Terence and NCBI fixup the track label on gene models track that is not from RefSeq
- src/hg/utils/automation/pairLastz.sh
- lines changed 1, context: html, text, full: html, text
8f49f3cafc739447cdee936784c69d70065996e3 Thu Dec 4 10:59:47 2025 -0800
remove unnecessary in incorrect setting Qarget from runSwap.sh
- src/hg/utils/otto/clinvar/clinVarToBed
- lines changed 5, context: html, text, full: html, text
46bdaa51aa44a800eda5961cd2a9ff3c3c700869 Wed Dec 3 10:11:00 2025 -0800
Fixing a typo from code review, refs #36786
- lines changed 1, context: html, text, full: html, text
66d4db32ebb42c4b5005e6c39a733bc1b75457d0 Mon Dec 8 08:06:52 2025 -0800
fixing clinvar bigbed type bug, refs #36810
- src/hg/utils/otto/clinvar/clinvarSubLolly
- lines changed 2, context: html, text, full: html, text
66d4db32ebb42c4b5005e6c39a733bc1b75457d0 Mon Dec 8 08:06:52 2025 -0800
fixing clinvar bigbed type bug, refs #36810
- src/hg/utils/otto/clinvar/doUpdate.sh
- lines changed 4, context: html, text, full: html, text
66d4db32ebb42c4b5005e6c39a733bc1b75457d0 Mon Dec 8 08:06:52 2025 -0800
fixing clinvar bigbed type bug, refs #36810
- src/product/mirrorManual.txt
- lines changed 2, context: html, text, full: html, text
89c69500ae6ce997047f59a264c6a9327aaef8d2 Fri Dec 5 03:27:09 2025 -0800
small update to build instructions, no redmine
- src/userApps/README
- lines changed 1, context: html, text, full: html, text
0f3294dcf8499c108ecca546a1df60debaa628af Wed Dec 3 09:46:08 2025 -0800
Our git archive use needs a git:// URL, no ticket
- src/userApps/fetchKentSource.sh
- lines changed 5, context: html, text, full: html, text
0f3294dcf8499c108ecca546a1df60debaa628af Wed Dec 3 09:46:08 2025 -0800
Our git archive use needs a git:// URL, no ticket
- src/utils/qa/checkStaticDocsDiff.py
- lines changed 197, context: html, text, full: html, text
93f7f9e49078d2ad71f0b73f4d56b211d36a57b5 Mon Dec 8 09:17:23 2025 -0800
Adding python script that reports differences in static HTML docs across hgwdev/hgwbeta/hgw0, refs #35294
- src/utils/qa/makefile
- lines changed 1, context: html, text, full: html, text
953908311427465877fb3d27ae8e9dc2469e71ac Wed Dec 3 17:39:14 2025 -0800
Adding a new cron script that will report CAPTCHA bypass usage, refs #36797
- lines changed 1, context: html, text, full: html, text
93f7f9e49078d2ad71f0b73f4d56b211d36a57b5 Mon Dec 8 09:17:23 2025 -0800
Adding python script that reports differences in static HTML docs across hgwdev/hgwbeta/hgw0, refs #35294
- src/utils/qa/reportCaptchaBypass.py
- lines changed 251, context: html, text, full: html, text
953908311427465877fb3d27ae8e9dc2469e71ac Wed Dec 3 17:39:14 2025 -0800
Adding a new cron script that will report CAPTCHA bypass usage, refs #36797
- lines changed: 2286
- files changed: 87