Commits for kate

v408_base to v409_preview (2020-12-07 to 2021-01-04) v409

9c54f7b9a4adb03a98fe14179ae1426a804854bf Mon Dec 7 15:18:35 2020 -0800

• Add track for recently released data (Release 4, October 2020). refs #26129
  • src/hg/makeDb/outside/covid/makeCovidHgiGwas.pl - lines changed 19, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/covidHgiGwas.ra - lines changed 47, context: html, text, full: html, text

72b81b56d5a8e434d283e2307220e0ae2826ef1e Mon Dec 7 16:14:51 2020 -0800

• Fixing some swapped labels and filters. refs #26616
  • src/hg/makeDb/trackDb/human/covidHgiGwas.ra - lines changed 8, context: html, text, full: html, text

74f7bc1b74e3688bb2ffe92826fea2dfc7d92ce0 Mon Dec 7 16:26:22 2020 -0800

• Another label fix. refs #26616
  • src/hg/makeDb/trackDb/human/covidHgiGwas.ra - lines changed 1, context: html, text, full: html, text

a16a2e7942c15da92cb03dbe35770bf76f3f5fee Fri Dec 11 09:32:54 2020 -0800

• First cut COVID GWAS Oct. 2020 data release. refs #26616
  • src/hg/makeDb/trackDb/human/covidHgiGwas.ra - lines changed 44, context: html, text, full: html, text

75919aa5b7ff1e9c80ae10a2f2aa5947f2ed00f0 Mon Dec 14 08:33:06 2020 -0800

• Update track build to support Release 4 and pvalue lolly height. refs #26616
  • src/hg/makeDb/outside/covid/makeCovidHgiGwas.pl - lines changed 30, context: html, text, full: html, text

40725e1032aa093a8bd38073dfd5bddcb1c7207b Mon Dec 14 08:38:53 2020 -0800

• Update track build to support Release 4 and pvalue lolly height. refs #26616
  • src/hg/makeDb/outside/covid/covidHgiGwas.as - lines changed 1, context: html, text, full: html, text

3a05d18b3a907bdd6868dac95dfe983dcc52d73f Fri Dec 18 19:30:27 2020 -0800

• Polishing up COVID GWAS Oct 2020 track(s). refs #26616
  • src/hg/makeDb/outside/covid/makeCovidHgiGwas.pl - lines changed 9, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/covidHgiGwas.ra - lines changed 37, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/covidHgiGwasR4.html - lines changed 131, context: html, text, full: html, text

67486cac9734e8590a43442a31ee396eedd714e1 Mon Dec 21 12:44:41 2020 -0800

• Polish track labels and subtrack ordering after Ana consult. refs #26616
  • src/hg/makeDb/trackDb/human/covidHgiGwas.ra - lines changed 75, context: html, text, full: html, text

d1043a0e3aaeaed5f705fcf77812718cd6ca76dc Mon Dec 21 12:49:06 2020 -0800

• Resolving merge conflict

a5e0acda0a4da7d3e89cc36f1f64e1e2a3d5f267 Mon Dec 21 17:06:35 2020 -0800

• Reload track with per-analysis median coloring, as per Ana suggestion. refs #26616
  • src/hg/makeDb/trackDb/human/covidHgiGwas.ra - lines changed 4, context: html, text, full: html, text

ee754a9166c5d010129381cf231715d2588dcfef Tue Dec 22 12:40:01 2020 -0800

• Add links gene regions on description page (by Ana). refs #26616
  • src/hg/makeDb/trackDb/human/covidHgiGwasR4Pval.html - lines changed 18, context: html, text, full: html, text

361ca0a4783780b16d7201cc132861ba7f35408f Tue Dec 22 12:43:41 2020 -0800

• Cosmetics on description page. refs #26616
  • src/hg/makeDb/trackDb/human/covidHgiGwasR4Pval.html - lines changed 1, context: html, text, full: html, text

b85941107d295df78e38d8020dffa07896fe7cbb Tue Dec 22 13:07:58 2020 -0800

• Adding make doc for R4 track. refs #26616
  • src/hg/makeDb/doc/covid/covidHgiGwas.txt - lines changed 197, context: html, text, full: html, text