Commits for braney
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v445_base to v446_preview (2023-03-13 to 2023-03-20) v446
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767e3f123a734a5c0623b2e635c7cdc59e9fb61f Mon Mar 13 10:48:38 2023 -0700
- starting on work to purge recommend track sets of all that is not
relevant to the rts
- src/hg/utils/rts/dumpSessions - lines changed 11, context: html, text, full: html, text
- src/hg/utils/rts/getTracks - lines changed 14, context: html, text, full: html, text
- src/hg/utils/rts/hg19/CNVs%20Clinical - lines changed 689, context: html, text, full: html, text
- src/hg/utils/rts/hg19/Non%20coding%20SNVs - lines changed 619, context: html, text, full: html, text
- src/hg/utils/rts/hg19/Problematic%20Regions - lines changed 247, context: html, text, full: html, text
- src/hg/utils/rts/hg19/SNVs%20Clinical - lines changed 739, context: html, text, full: html, text
- src/hg/utils/rts/hg38/Clinical_CNVs_hg38 - lines changed 297, context: html, text, full: html, text
- src/hg/utils/rts/hg38/Clinical_SNVs_hg38 - lines changed 292, context: html, text, full: html, text
- src/hg/utils/rts/hg38/Non_Coding_SNVs_hg38 - lines changed 353, context: html, text, full: html, text
- src/hg/utils/rts/hg38/Problematic_Regions_hg38 - lines changed 318, context: html, text, full: html, text
d81de2e463562bf4591506561b16594173fb76b9 Tue Mar 14 14:18:57 2023 -0700
- remove duplicates in RTS sessions
- src/hg/utils/rts/dumpSessions - lines changed 1, context: html, text, full: html, text
- src/hg/utils/rts/hg19/CNVs%20Clinical - lines changed 324, context: html, text, full: html, text
- src/hg/utils/rts/hg19/Problematic%20Regions - lines changed 2, context: html, text, full: html, text
- src/hg/utils/rts/hg19/SNVs%20Clinical - lines changed 303, context: html, text, full: html, text
- src/hg/utils/rts/hg38/Clinical_CNVs_hg38 - lines changed 1, context: html, text, full: html, text
- src/hg/utils/rts/hg38/Clinical_SNVs_hg38 - lines changed 2, context: html, text, full: html, text
- src/hg/utils/rts/hg38/Non_Coding_SNVs_hg38 - lines changed 2, context: html, text, full: html, text
- src/hg/utils/rts/hg38/Problematic_Regions_hg38 - lines changed 2, context: html, text, full: html, text
18d9591883af29405f3870fc649acbae9a798cd6 Wed Mar 15 17:03:51 2023 -0700
- check asmAlias BEFORE looking for curated hubs
- src/hg/lib/hubConnect.c - lines changed 1, context: html, text, full: html, text
f5bc011a1d5dd3daa3211c93eead19e8c7f50ce3 Thu Mar 16 16:53:32 2023 -0700
- polishing up squishyPack for release
- src/hg/hgTracks/hgTracks.c - lines changed 10, context: html, text, full: html, text
- src/hg/hgTracks/hgTracks.h - lines changed 1, context: html, text, full: html, text
- src/hg/hgTracks/simpleTracks.c - lines changed 10, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg38/knownGene.alpha.ra - lines changed 56, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/tagTypes.tab - lines changed 2, context: html, text, full: html, text
2ebbf76a87337459b3137c01283a4fa706538f14 Sat Mar 18 14:57:23 2023 -0700
- turn on phylo logo on dev. Turn off track download for squish
auxilliary tracks
- src/hg/makeDb/trackDb/human/hg38/trackDb.100way.alpha.ra - lines changed 114, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/tagTypes.tab - lines changed 1, context: html, text, full: html, text
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