All File Changes

v333_preview to v333_preview2 (2016-05-09 to 2016-05-16) v333

• confs/hgwbeta.hg.conf
  • lines changed 6, context: html, text, full: html, text
    34d11b5e7ddc3e6705e7a88ccbeb0896763a4c0e Tue May 10 16:39:57 2016 -0700
    updating hg.conf.beta to have bam wiggle setting refs #952
    
  • lines changed 3, context: html, text, full: html, text
    41ac2fb48d337d0b5de6cd8903c0ec34dc36de11 Thu May 12 10:51:56 2016 -0700
    updating hg.conf.beta to remove bam wiggle setting, no longer required in v333 refs #952
    
  • lines changed 3, context: html, text, full: html, text
    d2cf6397a7d3d0c2e0a8921ed18bb76c7a9269c9 Sun May 15 01:11:42 2016 -0700
    Installing updated hg.conf files from UCSC servers
    
• confs/hgwdev.hg.conf
  • lines changed 2, context: html, text, full: html, text
    d276f3a54c907f74f578c71163a1d588995388d2 Thu May 12 11:55:18 2016 -0700
    Commented out Gateway survey line to remove survey link on dev
    
  • lines changed 2, context: html, text, full: html, text
    d2cf6397a7d3d0c2e0a8921ed18bb76c7a9269c9 Sun May 15 01:11:42 2016 -0700
    Installing updated hg.conf files from UCSC servers
    
• confs/rr.hg.conf
  • lines changed 5, context: html, text, full: html, text
    d2cf6397a7d3d0c2e0a8921ed18bb76c7a9269c9 Sun May 15 01:11:42 2016 -0700
    Installing updated hg.conf files from UCSC servers
    
• src/hg/cirm/cdw/cdwMakeEnrichments/cdwMakeEnrichments.c
  • lines changed 7, context: html, text, full: html, text
    5fb5bde5147629cb856ed9ba6aaa5b195a4295f9 Mon May 16 10:55:48 2016 -0700
    Adding in expression_matrix and kallisto_abundnace formats, refs #17334
    
• src/hg/cirm/cdw/cdwMakeValidFile/cdwMakeValidFile.c
  • lines changed 4, context: html, text, full: html, text
    5b72ad6636470510b695e3fba5f24ec1b7e8d434 Mon May 16 10:57:58 2016 -0700
    Adding in the expression_matrix format to cdwMakeValidFile, refs #17334
    
• src/hg/cirm/cdw/cdwSubmit/cdwSubmit.c
  • lines changed 42, context: html, text, full: html, text
    ec67e5a15ab52cf0cbddde9d2259d96c655b2a78 Mon May 16 11:00:11 2016 -0700
    Added in an meta data field over ride in the manifest files. data_set_id can be used in place of meta for data set wide files, refs #17334
    
• src/hg/cirm/cdw/inc/cdw.h
  • lines changed 70, context: html, text, full: html, text
    71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
    Moving cdwDataset from it's own .as file into cdw.as.
    
  • lines changed 2, context: html, text, full: html, text
    fba7c99faf3d7d3c1a5c26ef3a22fcba672c4511 Wed May 11 15:40:47 2016 -0700
    Making it so that experiment tag will populate the cdwValidFile.experiment field if it exists. If it doesn't exist it will use the meta tag instead.
    
• src/hg/cirm/cdw/lib/cdw.as
  • lines changed 9, context: html, text, full: html, text
    71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
    Moving cdwDataset from it's own .as file into cdw.as.
    
  • lines changed 1, context: html, text, full: html, text
    fba7c99faf3d7d3c1a5c26ef3a22fcba672c4511 Wed May 11 15:40:47 2016 -0700
    Making it so that experiment tag will populate the cdwValidFile.experiment field if it exists. If it doesn't exist it will use the meta tag instead.
    
• src/hg/cirm/cdw/lib/cdw.c
  • lines changed 173, context: html, text, full: html, text
    71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
    Moving cdwDataset from it's own .as file into cdw.as.
    
  • lines changed 13, context: html, text, full: html, text
    fba7c99faf3d7d3c1a5c26ef3a22fcba672c4511 Wed May 11 15:40:47 2016 -0700
    Making it so that experiment tag will populate the cdwValidFile.experiment field if it exists. If it doesn't exist it will use the meta tag instead.
    
• src/hg/cirm/cdw/lib/cdw.sql
  • lines changed 11, context: html, text, full: html, text
    71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
    Moving cdwDataset from it's own .as file into cdw.as.
    
  • lines changed 1, context: html, text, full: html, text
    fba7c99faf3d7d3c1a5c26ef3a22fcba672c4511 Wed May 11 15:40:47 2016 -0700
    Making it so that experiment tag will populate the cdwValidFile.experiment field if it exists. If it doesn't exist it will use the meta tag instead.
    
• src/hg/cirm/cdw/lib/cdwDataset.as
  • lines changed 9, context: html, text, full: html, text
    71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
    Moving cdwDataset from it's own .as file into cdw.as.
    
• src/hg/cirm/cdw/lib/cdwDataset.c
  • lines changed 150, context: html, text, full: html, text
    71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
    Moving cdwDataset from it's own .as file into cdw.as.
    
• src/hg/cirm/cdw/lib/cdwDataset.h
  • lines changed 67, context: html, text, full: html, text
    71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
    Moving cdwDataset from it's own .as file into cdw.as.
    
• src/hg/cirm/cdw/lib/cdwDataset.sql
  • lines changed 15, context: html, text, full: html, text
    71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
    Moving cdwDataset from it's own .as file into cdw.as.
    
• src/hg/cirm/cdw/lib/cdwLib.c
  • lines changed 12, context: html, text, full: html, text
    fba7c99faf3d7d3c1a5c26ef3a22fcba672c4511 Wed May 11 15:40:47 2016 -0700
    Making it so that experiment tag will populate the cdwValidFile.experiment field if it exists. If it doesn't exist it will use the meta tag instead.
    
• src/hg/cirm/cdw/lib/cdwValid.c
  • lines changed 3, context: html, text, full: html, text
    6870302d3531b591d20002f4dbbbe77d860ddbdd Wed May 4 15:34:54 2016 -0700
    Adding in the LQT tag and the pcr_cycles tag
    
  • lines changed 3, context: html, text, full: html, text
    e353ef063d16631f6a40ec28c5dc4693ae2d8c21 Wed May 11 15:31:54 2016 -0700
    Adding experiment tag, and new values for sequencer and disease tags.
    
  • lines changed 1, context: html, text, full: html, text
    776454fcb10ee2f2c0c647514b5b965775d2d751 Mon May 16 10:57:00 2016 -0700
    Adding in the expression_matrix format to cdwLib, refs #17334
    
• src/hg/cirm/cdw/lib/makefile
  • lines changed 1, context: html, text, full: html, text
    71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
    Moving cdwDataset from it's own .as file into cdw.as.
    
• src/hg/encode3/encodeDataWarehouse/lib/edwLib.c
  • lines changed 1, context: html, text, full: html, text
    1ccf3ecaf1321b08f208b91beaadf92ec8151384 Tue May 10 13:17:59 2016 -0700
    fixup used uninitalized error refs #17294
    
• src/hg/hgCustom/hgCustom.c
  • lines changed 6, context: html, text, full: html, text
    282a4958b8e808f57ecea4c6e8dfb56054f4579c Tue May 10 10:08:26 2016 -0700
    initialDb logic assumed that the cart already had db, but when hgCustom is accessed from the main page with no cookies, there is no db in the cart; use empty string. Also make addCustomForm ignore empty err string so we don't need a special case for passing in err string vs NULL. refs #17295 fixes #16174
    
• src/hg/hgGateway/hgGateway.c
  • lines changed 1, context: html, text, full: html, text
    5a68a854988fcfa8168650ff90f9ca26725e4bd1 Wed May 11 10:46:26 2016 -0700
    Added a missing NULL check for assembly hub description URL that was crashing hgGateway. fixes #17315 refs #17312.
    
  • lines changed 1, context: html, text, full: html, text
    fb697a0c3d6910f8acd9725fd420f6cd42be64e9 Wed May 11 16:12:06 2016 -0700
    new gbic script, refs #14399
    
• src/hg/hgGene/hgGeneData/Human/hg19/section.ra
  • lines changed 2, context: html, text, full: html, text
    bef9a5b58fb85cc613feecdb2966d7811b083dcc Wed May 11 16:51:10 2016 -0700
    Change GTEx hgGene section header to be more consistent with link name. Input from Braney during code review.
    
• src/hg/hgGene/hgGeneData/Human/hg38/section.ra
  • lines changed 2, context: html, text, full: html, text
    bef9a5b58fb85cc613feecdb2966d7811b083dcc Wed May 11 16:51:10 2016 -0700
    Change GTEx hgGene section header to be more consistent with link name. Input from Braney during code review.
    
• src/hg/hgLogin/hgLogin.c
  • lines changed 5, context: html, text, full: html, text
    a240964d6dfdd6f8661487b64538d33518d88501 Mon May 16 09:38:09 2016 -0700
    Added checking of wiki.loggedInCookie (numeric user ID) using random numbers as suggested by Max
    if the new centralDb table gbMemberToken exists, otherwise checking the ID vs gbMembers.idx.
    refs #17327
    
• src/hg/hgSession/hgSession.c
  • lines changed 51, context: html, text, full: html, text
    a240964d6dfdd6f8661487b64538d33518d88501 Mon May 16 09:38:09 2016 -0700
    Added checking of wiki.loggedInCookie (numeric user ID) using random numbers as suggested by Max
    if the new centralDb table gbMemberToken exists, otherwise checking the ID vs gbMembers.idx.
    refs #17327
    
• src/hg/hgTables/intersect.c
  • lines changed 4, context: html, text, full: html, text
    312123fe72695f041738fb3729961c31d5c9593e Wed May 11 10:19:13 2016 -0700
    When the hgtaIntersectTable is carried over from a SQL database, but we have switched to a track hub database, various is<Type> functions were calling sql-only hdb functions. Added support for track hub db to hTableExists(); check existence before trying to determine the type of some table.
    
  • lines changed 4, context: html, text, full: html, text
    fb697a0c3d6910f8acd9725fd420f6cd42be64e9 Wed May 11 16:12:06 2016 -0700
    new gbic script, refs #14399
    
• src/hg/hgTracks/bedTrack.c
  • lines changed 14, context: html, text, full: html, text
    4e4629ec70e0b6635441790483d6d24bb30df91b Fri May 13 17:00:35 2016 -0700
    first cut at long range interaction track
    
• src/hg/hgTracks/bigBedTrack.c
  • lines changed 1, context: html, text, full: html, text
    3afb1ad18d251832c36c02910ba194a3996ab47a Mon May 9 14:56:22 2016 -0700
    some changes to bigPsl format
    
• src/hg/hgTracks/connectTrack.c
  • lines changed 143, context: html, text, full: html, text
    087cf4606b0df6c0c5b9db6df76ea8e15b1551c7 Fri May 13 17:22:30 2016 -0700
    oops... missed a file needed for bedTabix and longTabix
    
• src/hg/hgTracks/hgTracks.c
  • lines changed 7, context: html, text, full: html, text
    4e4629ec70e0b6635441790483d6d24bb30df91b Fri May 13 17:00:35 2016 -0700
    first cut at long range interaction track
    
• src/hg/hgTracks/hgTracks.h
  • lines changed 3, context: html, text, full: html, text
    4e4629ec70e0b6635441790483d6d24bb30df91b Fri May 13 17:00:35 2016 -0700
    first cut at long range interaction track
    
• src/hg/hgTracks/makefile
  • lines changed 1, context: html, text, full: html, text
    4e4629ec70e0b6635441790483d6d24bb30df91b Fri May 13 17:00:35 2016 -0700
    first cut at long range interaction track
    
• src/hg/hgTracks/multiWig.c
  • lines changed 2, context: html, text, full: html, text
    52432fd218c9b33509078dd1514acd021d30439b Wed May 11 11:50:25 2016 -0700
    fix #17281 bug with stacked bars and only one dataset
    
• src/hg/hgTracks/simpleTracks.c
  • lines changed 19, context: html, text, full: html, text
    4e4629ec70e0b6635441790483d6d24bb30df91b Fri May 13 17:00:35 2016 -0700
    first cut at long range interaction track
    
• src/hg/hgc/hgc.c
  • lines changed 2, context: html, text, full: html, text
    3afb1ad18d251832c36c02910ba194a3996ab47a Mon May 9 14:56:22 2016 -0700
    some changes to bigPsl format
    
  • lines changed 5, context: html, text, full: html, text
    330109b998a61e1a9db6764b96f40dceb918ffc6 Thu May 12 16:08:34 2016 -0700
    a couple of changes in response to code review
    
• src/hg/htdocs/FAQ/FAQformat.html
  • lines changed 126, context: html, text, full: html, text
    57275b00fff2a36640700b50ec2af37af42fca97 Tue May 10 15:10:21 2016 -0700
    changes to document new big* formats
    
  • lines changed 3, context: html, text, full: html, text
    f75c6a6591461c2d716288d0b278cadf938e6590 Tue May 10 18:48:27 2016 -0700
    more changes to doc new big* formats
    
• src/hg/htdocs/goldenPath/help/bigChain.html
  • lines changed 3, context: html, text, full: html, text
    f75c6a6591461c2d716288d0b278cadf938e6590 Tue May 10 18:48:27 2016 -0700
    more changes to doc new big* formats
    
• src/hg/htdocs/goldenPath/help/bigMaf.html
  • lines changed 18, context: html, text, full: html, text
    f75c6a6591461c2d716288d0b278cadf938e6590 Tue May 10 18:48:27 2016 -0700
    more changes to doc new big* formats
    
• src/hg/htdocs/goldenPath/help/bigPsl.html
  • lines changed 4, context: html, text, full: html, text
    57275b00fff2a36640700b50ec2af37af42fca97 Tue May 10 15:10:21 2016 -0700
    changes to document new big* formats
    
  • lines changed 11, context: html, text, full: html, text
    f75c6a6591461c2d716288d0b278cadf938e6590 Tue May 10 18:48:27 2016 -0700
    more changes to doc new big* formats
    
• src/hg/htdocs/goldenPath/help/customTrackText.html
  • lines changed 3, context: html, text, full: html, text
    57275b00fff2a36640700b50ec2af37af42fca97 Tue May 10 15:10:21 2016 -0700
    changes to document new big* formats
    
• src/hg/htdocs/goldenPath/help/hgBamTrackHelp.html
  • lines changed 13, context: html, text, full: html, text
    916a2247348c6b71ebde9551bf3611cb9711d444 Tue May 10 16:18:17 2016 -0700
    Adding note to bam help page about bam density. ref #952
    
• src/hg/htdocs/goldenPath/help/hgTrackHubHelp.html
  • lines changed 6, context: html, text, full: html, text
    57275b00fff2a36640700b50ec2af37af42fca97 Tue May 10 15:10:21 2016 -0700
    changes to document new big* formats
    
• src/hg/htdocs/goldenPath/help/trackDb/trackDbLibrary.shtml
  • lines changed 3, context: html, text, full: html, text
    57275b00fff2a36640700b50ec2af37af42fca97 Tue May 10 15:10:21 2016 -0700
    changes to document new big* formats
    
• src/hg/htdocs/goldenPath/newsarch.html
  • lines changed 44, context: html, text, full: html, text
    c56502087bdb7d59041fe08c8ac09585ed274b92 Mon May 9 16:15:30 2016 -0700
    Staging news release about new Gateway refs #15277
    
  • lines changed 1, context: html, text, full: html, text
    8cbf7e967bbee0fbe6819f99bc2497b633c72ac3 Tue May 10 09:09:35 2016 -0700
    Editing news release about new Gateway refs #15277
    
  • lines changed 27, context: html, text, full: html, text
    46a2fce90f0f9ece6b8e0b734fc3e9a956567dc1 Tue May 10 11:01:41 2016 -0700
    Made a few edits on gateway page news item.
    
• src/hg/htdocs/inc/jWestFooter.html
  • lines changed 6, context: html, text, full: html, text
    e80bfeb008dccf887c5e6d6c15b702050157b297 Tue May 10 14:10:43 2016 -0700
    Temporarily changing relative URLs to absolute http://genome.ucsc.edu/ URLs for v332 release. To be reverted...
    
  • lines changed 7, context: html, text, full: html, text
    bf6a59576de3f69c5e38ace2e86d9c85a3c307b4 Wed May 11 15:39:28 2016 -0700
    Undoing e80bfeb00 (absolute links to http://genome.ucsc.edu) -- as Matt suggested, use ../ relative links which takes care of hgGateway. When static pages start using inc/jWestFooter.html, we will need something like hgMenubar to adjust the links. refs #17307
    
  • lines changed 1, context: html, text, full: html, text
    bcaafef5db6eab27cf08b521cf23729b7aa08365 Thu May 12 16:05:15 2016 -0700
    Oops, blog link does need to be absolute.
    
• src/hg/htdocs/indexNews.html
  • lines changed 124, context: html, text, full: html, text
    c56502087bdb7d59041fe08c8ac09585ed274b92 Mon May 9 16:15:30 2016 -0700
    Staging news release about new Gateway refs #15277
    
  • lines changed 1, context: html, text, full: html, text
    8cbf7e967bbee0fbe6819f99bc2497b633c72ac3 Tue May 10 09:09:35 2016 -0700
    Editing news release about new Gateway refs #15277
    
  • lines changed 35, context: html, text, full: html, text
    46a2fce90f0f9ece6b8e0b734fc3e9a956567dc1 Tue May 10 11:01:41 2016 -0700
    Made a few edits on gateway page news item.
    
• src/hg/htdocs/staff.html
  • lines changed 1, context: html, text, full: html, text
    f708c7575458a0dcaae806bfb933d1be8568c417 Tue May 10 11:03:59 2016 -0700
    Adding Steve to project alumni refs #17298
    
• src/hg/inc/bigPsl.h
  • lines changed 2, context: html, text, full: html, text
    3afb1ad18d251832c36c02910ba194a3996ab47a Mon May 9 14:56:22 2016 -0700
    some changes to bigPsl format
    
• src/hg/inc/hui.h
  • lines changed 2, context: html, text, full: html, text
    72211d6e55ffad9e5f12048276243e79f33b71b1 Thu May 12 10:30:07 2016 -0700
    remove "canDoCoverage" hg.conf variable. Density graph is now always
    offered.
    
  • lines changed 2, context: html, text, full: html, text
    fbcba9729a66e8b13f23ee55da62f6b716cea1d0 Fri May 13 11:52:29 2016 -0700
    Revert "remove "canDoCoverage" hg.conf variable. Density graph is now always"
    
    This reverts commit 72211d6e55ffad9e5f12048276243e79f33b71b1.
    
• src/hg/inc/wikiLink.h
  • lines changed 10, context: html, text, full: html, text
    a240964d6dfdd6f8661487b64538d33518d88501 Mon May 16 09:38:09 2016 -0700
    Added checking of wiki.loggedInCookie (numeric user ID) using random numbers as suggested by Max
    if the new centralDb table gbMemberToken exists, otherwise checking the ID vs gbMembers.idx.
    refs #17327
    
• src/hg/lib/bigPsl.as
  • lines changed 2, context: html, text, full: html, text
    3afb1ad18d251832c36c02910ba194a3996ab47a Mon May 9 14:56:22 2016 -0700
    some changes to bigPsl format
    
• src/hg/lib/bigPsl.c
  • lines changed 8, context: html, text, full: html, text
    3afb1ad18d251832c36c02910ba194a3996ab47a Mon May 9 14:56:22 2016 -0700
    some changes to bigPsl format
    
• src/hg/lib/cart.c
  • lines changed 7, context: html, text, full: html, text
    a240964d6dfdd6f8661487b64538d33518d88501 Mon May 16 09:38:09 2016 -0700
    Added checking of wiki.loggedInCookie (numeric user ID) using random numbers as suggested by Max
    if the new centralDb table gbMemberToken exists, otherwise checking the ID vs gbMembers.idx.
    refs #17327
    
• src/hg/lib/customFactory.c
  • lines changed 1, context: html, text, full: html, text
    330109b998a61e1a9db6764b96f40dceb918ffc6 Thu May 12 16:08:34 2016 -0700
    a couple of changes in response to code review
    
  • lines changed 82, context: html, text, full: html, text
    4e4629ec70e0b6635441790483d6d24bb30df91b Fri May 13 17:00:35 2016 -0700
    first cut at long range interaction track
    
• src/hg/lib/gbMemberToken.as
  • lines changed 7, context: html, text, full: html, text
    a240964d6dfdd6f8661487b64538d33518d88501 Mon May 16 09:38:09 2016 -0700
    Added checking of wiki.loggedInCookie (numeric user ID) using random numbers as suggested by Max
    if the new centralDb table gbMemberToken exists, otherwise checking the ID vs gbMembers.idx.
    refs #17327
    
• src/hg/lib/gbMemberToken.sql
  • lines changed 13, context: html, text, full: html, text
    a240964d6dfdd6f8661487b64538d33518d88501 Mon May 16 09:38:09 2016 -0700
    Added checking of wiki.loggedInCookie (numeric user ID) using random numbers as suggested by Max
    if the new centralDb table gbMemberToken exists, otherwise checking the ID vs gbMembers.idx.
    refs #17327
    
• src/hg/lib/genbank.c
  • lines changed 17, context: html, text, full: html, text
    37f2949bd230359381df9070c80361bddc058fc3 Sat May 14 16:47:31 2016 -0700
    add some logic so genbank tables are retrieved from hgFixed in genbankDb
    is not in hg.conf and the table exists
    
• src/hg/lib/hdb.c
  • lines changed 14, context: html, text, full: html, text
    312123fe72695f041738fb3729961c31d5c9593e Wed May 11 10:19:13 2016 -0700
    When the hgtaIntersectTable is carried over from a SQL database, but we have switched to a track hub database, various is<Type> functions were calling sql-only hdb functions. Added support for track hub db to hTableExists(); check existence before trying to determine the type of some table.
    
  • lines changed 14, context: html, text, full: html, text
    fb697a0c3d6910f8acd9725fd420f6cd42be64e9 Wed May 11 16:12:06 2016 -0700
    new gbic script, refs #14399
    
• src/hg/lib/hgBam.c
  • lines changed 13, context: html, text, full: html, text
    3377b968b5f797ef07f454f5a5fb125668f6c2e4 Tue May 10 12:10:55 2016 -0700
    fix a problem that shows up if neither samtabix or htslib are installed
    
• src/hg/lib/hui.c
  • lines changed 2, context: html, text, full: html, text
    ae2e455571ffc0efc3e4011688259ae72cbafd8c Wed May 11 16:49:32 2016 -0700
    Print metadata directly on hgc page, rather than requiring a click through. JK request. refs #17314
    
  • lines changed 5, context: html, text, full: html, text
    72211d6e55ffad9e5f12048276243e79f33b71b1 Thu May 12 10:30:07 2016 -0700
    remove "canDoCoverage" hg.conf variable. Density graph is now always
    offered.
    
  • lines changed 1, context: html, text, full: html, text
    cc659a8d5b8669461e135d517eb59249de9dbbab Thu May 12 11:28:21 2016 -0700
    allow coverage wiggles for bigBeds
    
  • lines changed 1, context: html, text, full: html, text
    237b5bec54fd46beff17c0271934593c15b3081b Thu May 12 17:16:42 2016 -0700
    back out hasty code change to allow density graphs on too many track
    types
    
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    fbcba9729a66e8b13f23ee55da62f6b716cea1d0 Fri May 13 11:52:29 2016 -0700
    Revert "remove "canDoCoverage" hg.conf variable. Density graph is now always"
    
    This reverts commit 72211d6e55ffad9e5f12048276243e79f33b71b1.
    
• src/hg/lib/oregannoUi.c
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    b8ff1764a994eff8d3f820e41ca6e0f7263a008e Mon May 9 10:12:46 2016 -0700
    Adding colored labels to oreganno track controls, refs #15957
    
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    5615ffccc75fa3e3a6b1477b696c1488a407b865 Thu May 12 13:22:56 2016 -0700
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    a240964d6dfdd6f8661487b64538d33518d88501 Mon May 16 09:38:09 2016 -0700
    Added checking of wiki.loggedInCookie (numeric user ID) using random numbers as suggested by Max
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    refs #17327
    
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    1e7484608fe7cd33713c45edc146656d3127d06c Mon May 9 12:51:03 2016 -0700
    done with 5-way alignment for galVar1 work refs #17180
    
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    269ade0eca860da517c064fb6471a1bb72b26962 Fri May 13 14:43:13 2016 -0700
    run up liftOver to ce11 per user Kevin Howe request no redmine
    
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    done and in the pushQ refs #17168
    
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    running up rn6 and danRer10 liftOver per user request refs #17015
    
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