All File Changes
v333_preview to v333_preview2 (2016-05-09 to 2016-05-16) v333
Show details
- confs/hgwbeta.hg.conf
- lines changed 6, context: html, text, full: html, text
34d11b5e7ddc3e6705e7a88ccbeb0896763a4c0e Tue May 10 16:39:57 2016 -0700
updating hg.conf.beta to have bam wiggle setting refs #952
- lines changed 3, context: html, text, full: html, text
41ac2fb48d337d0b5de6cd8903c0ec34dc36de11 Thu May 12 10:51:56 2016 -0700
updating hg.conf.beta to remove bam wiggle setting, no longer required in v333 refs #952
- lines changed 3, context: html, text, full: html, text
d2cf6397a7d3d0c2e0a8921ed18bb76c7a9269c9 Sun May 15 01:11:42 2016 -0700
Installing updated hg.conf files from UCSC servers
- confs/hgwdev.hg.conf
- lines changed 2, context: html, text, full: html, text
d276f3a54c907f74f578c71163a1d588995388d2 Thu May 12 11:55:18 2016 -0700
Commented out Gateway survey line to remove survey link on dev
- lines changed 2, context: html, text, full: html, text
d2cf6397a7d3d0c2e0a8921ed18bb76c7a9269c9 Sun May 15 01:11:42 2016 -0700
Installing updated hg.conf files from UCSC servers
- confs/rr.hg.conf
- lines changed 5, context: html, text, full: html, text
d2cf6397a7d3d0c2e0a8921ed18bb76c7a9269c9 Sun May 15 01:11:42 2016 -0700
Installing updated hg.conf files from UCSC servers
- src/hg/cirm/cdw/cdwMakeEnrichments/cdwMakeEnrichments.c
- lines changed 7, context: html, text, full: html, text
5fb5bde5147629cb856ed9ba6aaa5b195a4295f9 Mon May 16 10:55:48 2016 -0700
Adding in expression_matrix and kallisto_abundnace formats, refs #17334
- src/hg/cirm/cdw/cdwMakeValidFile/cdwMakeValidFile.c
- lines changed 4, context: html, text, full: html, text
5b72ad6636470510b695e3fba5f24ec1b7e8d434 Mon May 16 10:57:58 2016 -0700
Adding in the expression_matrix format to cdwMakeValidFile, refs #17334
- src/hg/cirm/cdw/cdwSubmit/cdwSubmit.c
- lines changed 42, context: html, text, full: html, text
ec67e5a15ab52cf0cbddde9d2259d96c655b2a78 Mon May 16 11:00:11 2016 -0700
Added in an meta data field over ride in the manifest files. data_set_id can be used in place of meta for data set wide files, refs #17334
- src/hg/cirm/cdw/inc/cdw.h
- lines changed 70, context: html, text, full: html, text
71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
Moving cdwDataset from it's own .as file into cdw.as.
- lines changed 2, context: html, text, full: html, text
fba7c99faf3d7d3c1a5c26ef3a22fcba672c4511 Wed May 11 15:40:47 2016 -0700
Making it so that experiment tag will populate the cdwValidFile.experiment field if it exists. If it doesn't exist it will use the meta tag instead.
- src/hg/cirm/cdw/lib/cdw.as
- lines changed 9, context: html, text, full: html, text
71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
Moving cdwDataset from it's own .as file into cdw.as.
- lines changed 1, context: html, text, full: html, text
fba7c99faf3d7d3c1a5c26ef3a22fcba672c4511 Wed May 11 15:40:47 2016 -0700
Making it so that experiment tag will populate the cdwValidFile.experiment field if it exists. If it doesn't exist it will use the meta tag instead.
- src/hg/cirm/cdw/lib/cdw.c
- lines changed 173, context: html, text, full: html, text
71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
Moving cdwDataset from it's own .as file into cdw.as.
- lines changed 13, context: html, text, full: html, text
fba7c99faf3d7d3c1a5c26ef3a22fcba672c4511 Wed May 11 15:40:47 2016 -0700
Making it so that experiment tag will populate the cdwValidFile.experiment field if it exists. If it doesn't exist it will use the meta tag instead.
- src/hg/cirm/cdw/lib/cdw.sql
- lines changed 11, context: html, text, full: html, text
71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
Moving cdwDataset from it's own .as file into cdw.as.
- lines changed 1, context: html, text, full: html, text
fba7c99faf3d7d3c1a5c26ef3a22fcba672c4511 Wed May 11 15:40:47 2016 -0700
Making it so that experiment tag will populate the cdwValidFile.experiment field if it exists. If it doesn't exist it will use the meta tag instead.
- src/hg/cirm/cdw/lib/cdwDataset.as
- lines changed 9, context: html, text, full: html, text
71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
Moving cdwDataset from it's own .as file into cdw.as.
- src/hg/cirm/cdw/lib/cdwDataset.c
- lines changed 150, context: html, text, full: html, text
71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
Moving cdwDataset from it's own .as file into cdw.as.
- src/hg/cirm/cdw/lib/cdwDataset.h
- lines changed 67, context: html, text, full: html, text
71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
Moving cdwDataset from it's own .as file into cdw.as.
- src/hg/cirm/cdw/lib/cdwDataset.sql
- lines changed 15, context: html, text, full: html, text
71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
Moving cdwDataset from it's own .as file into cdw.as.
- src/hg/cirm/cdw/lib/cdwLib.c
- lines changed 12, context: html, text, full: html, text
fba7c99faf3d7d3c1a5c26ef3a22fcba672c4511 Wed May 11 15:40:47 2016 -0700
Making it so that experiment tag will populate the cdwValidFile.experiment field if it exists. If it doesn't exist it will use the meta tag instead.
- src/hg/cirm/cdw/lib/cdwValid.c
- lines changed 3, context: html, text, full: html, text
6870302d3531b591d20002f4dbbbe77d860ddbdd Wed May 4 15:34:54 2016 -0700
Adding in the LQT tag and the pcr_cycles tag
- lines changed 3, context: html, text, full: html, text
e353ef063d16631f6a40ec28c5dc4693ae2d8c21 Wed May 11 15:31:54 2016 -0700
Adding experiment tag, and new values for sequencer and disease tags.
- lines changed 1, context: html, text, full: html, text
776454fcb10ee2f2c0c647514b5b965775d2d751 Mon May 16 10:57:00 2016 -0700
Adding in the expression_matrix format to cdwLib, refs #17334
- src/hg/cirm/cdw/lib/makefile
- lines changed 1, context: html, text, full: html, text
71baafdd2df6c81e29e4d337149441d5ef74880f Thu May 5 15:33:20 2016 -0700
Moving cdwDataset from it's own .as file into cdw.as.
- src/hg/encode3/encodeDataWarehouse/lib/edwLib.c
- lines changed 1, context: html, text, full: html, text
1ccf3ecaf1321b08f208b91beaadf92ec8151384 Tue May 10 13:17:59 2016 -0700
fixup used uninitalized error refs #17294
- src/hg/hgCustom/hgCustom.c
- lines changed 6, context: html, text, full: html, text
282a4958b8e808f57ecea4c6e8dfb56054f4579c Tue May 10 10:08:26 2016 -0700
initialDb logic assumed that the cart already had db, but when hgCustom is accessed from the main page with no cookies, there is no db in the cart; use empty string. Also make addCustomForm ignore empty err string so we don't need a special case for passing in err string vs NULL. refs #17295 fixes #16174
- src/hg/hgGateway/hgGateway.c
- lines changed 1, context: html, text, full: html, text
5a68a854988fcfa8168650ff90f9ca26725e4bd1 Wed May 11 10:46:26 2016 -0700
Added a missing NULL check for assembly hub description URL that was crashing hgGateway. fixes #17315 refs #17312.
- lines changed 1, context: html, text, full: html, text
fb697a0c3d6910f8acd9725fd420f6cd42be64e9 Wed May 11 16:12:06 2016 -0700
new gbic script, refs #14399
- src/hg/hgGene/hgGeneData/Human/hg19/section.ra
- lines changed 2, context: html, text, full: html, text
bef9a5b58fb85cc613feecdb2966d7811b083dcc Wed May 11 16:51:10 2016 -0700
Change GTEx hgGene section header to be more consistent with link name. Input from Braney during code review.
- src/hg/hgGene/hgGeneData/Human/hg38/section.ra
- lines changed 2, context: html, text, full: html, text
bef9a5b58fb85cc613feecdb2966d7811b083dcc Wed May 11 16:51:10 2016 -0700
Change GTEx hgGene section header to be more consistent with link name. Input from Braney during code review.
- src/hg/hgLogin/hgLogin.c
- lines changed 5, context: html, text, full: html, text
a240964d6dfdd6f8661487b64538d33518d88501 Mon May 16 09:38:09 2016 -0700
Added checking of wiki.loggedInCookie (numeric user ID) using random numbers as suggested by Max
if the new centralDb table gbMemberToken exists, otherwise checking the ID vs gbMembers.idx.
refs #17327
- src/hg/hgSession/hgSession.c
- lines changed 51, context: html, text, full: html, text
a240964d6dfdd6f8661487b64538d33518d88501 Mon May 16 09:38:09 2016 -0700
Added checking of wiki.loggedInCookie (numeric user ID) using random numbers as suggested by Max
if the new centralDb table gbMemberToken exists, otherwise checking the ID vs gbMembers.idx.
refs #17327
- src/hg/hgTables/intersect.c
- lines changed 4, context: html, text, full: html, text
312123fe72695f041738fb3729961c31d5c9593e Wed May 11 10:19:13 2016 -0700
When the hgtaIntersectTable is carried over from a SQL database, but we have switched to a track hub database, various is<Type> functions were calling sql-only hdb functions. Added support for track hub db to hTableExists(); check existence before trying to determine the type of some table.
- lines changed 4, context: html, text, full: html, text
fb697a0c3d6910f8acd9725fd420f6cd42be64e9 Wed May 11 16:12:06 2016 -0700
new gbic script, refs #14399
- src/hg/hgTracks/bedTrack.c
- lines changed 14, context: html, text, full: html, text
4e4629ec70e0b6635441790483d6d24bb30df91b Fri May 13 17:00:35 2016 -0700
first cut at long range interaction track
- src/hg/hgTracks/bigBedTrack.c
- lines changed 1, context: html, text, full: html, text
3afb1ad18d251832c36c02910ba194a3996ab47a Mon May 9 14:56:22 2016 -0700
some changes to bigPsl format
- src/hg/hgTracks/connectTrack.c
- lines changed 143, context: html, text, full: html, text
087cf4606b0df6c0c5b9db6df76ea8e15b1551c7 Fri May 13 17:22:30 2016 -0700
oops... missed a file needed for bedTabix and longTabix
- src/hg/hgTracks/hgTracks.c
- lines changed 7, context: html, text, full: html, text
4e4629ec70e0b6635441790483d6d24bb30df91b Fri May 13 17:00:35 2016 -0700
first cut at long range interaction track
- src/hg/hgTracks/hgTracks.h
- lines changed 3, context: html, text, full: html, text
4e4629ec70e0b6635441790483d6d24bb30df91b Fri May 13 17:00:35 2016 -0700
first cut at long range interaction track
- src/hg/hgTracks/makefile
- lines changed 1, context: html, text, full: html, text
4e4629ec70e0b6635441790483d6d24bb30df91b Fri May 13 17:00:35 2016 -0700
first cut at long range interaction track
- src/hg/hgTracks/multiWig.c
- lines changed 2, context: html, text, full: html, text
52432fd218c9b33509078dd1514acd021d30439b Wed May 11 11:50:25 2016 -0700
fix #17281 bug with stacked bars and only one dataset
- src/hg/hgTracks/simpleTracks.c
- lines changed 19, context: html, text, full: html, text
4e4629ec70e0b6635441790483d6d24bb30df91b Fri May 13 17:00:35 2016 -0700
first cut at long range interaction track
- src/hg/hgc/hgc.c
- lines changed 2, context: html, text, full: html, text
3afb1ad18d251832c36c02910ba194a3996ab47a Mon May 9 14:56:22 2016 -0700
some changes to bigPsl format
- lines changed 5, context: html, text, full: html, text
330109b998a61e1a9db6764b96f40dceb918ffc6 Thu May 12 16:08:34 2016 -0700
a couple of changes in response to code review
- src/hg/htdocs/FAQ/FAQformat.html
- lines changed 126, context: html, text, full: html, text
57275b00fff2a36640700b50ec2af37af42fca97 Tue May 10 15:10:21 2016 -0700
changes to document new big* formats
- lines changed 3, context: html, text, full: html, text
f75c6a6591461c2d716288d0b278cadf938e6590 Tue May 10 18:48:27 2016 -0700
more changes to doc new big* formats
- src/hg/htdocs/goldenPath/help/bigChain.html
- lines changed 3, context: html, text, full: html, text
f75c6a6591461c2d716288d0b278cadf938e6590 Tue May 10 18:48:27 2016 -0700
more changes to doc new big* formats
- src/hg/htdocs/goldenPath/help/bigMaf.html
- lines changed 18, context: html, text, full: html, text
f75c6a6591461c2d716288d0b278cadf938e6590 Tue May 10 18:48:27 2016 -0700
more changes to doc new big* formats
- src/hg/htdocs/goldenPath/help/bigPsl.html
- lines changed 4, context: html, text, full: html, text
57275b00fff2a36640700b50ec2af37af42fca97 Tue May 10 15:10:21 2016 -0700
changes to document new big* formats
- lines changed 11, context: html, text, full: html, text
f75c6a6591461c2d716288d0b278cadf938e6590 Tue May 10 18:48:27 2016 -0700
more changes to doc new big* formats
- src/hg/htdocs/goldenPath/help/customTrackText.html
- lines changed 3, context: html, text, full: html, text
57275b00fff2a36640700b50ec2af37af42fca97 Tue May 10 15:10:21 2016 -0700
changes to document new big* formats
- src/hg/htdocs/goldenPath/help/hgBamTrackHelp.html
- lines changed 13, context: html, text, full: html, text
916a2247348c6b71ebde9551bf3611cb9711d444 Tue May 10 16:18:17 2016 -0700
Adding note to bam help page about bam density. ref #952
- src/hg/htdocs/goldenPath/help/hgTrackHubHelp.html
- lines changed 6, context: html, text, full: html, text
57275b00fff2a36640700b50ec2af37af42fca97 Tue May 10 15:10:21 2016 -0700
changes to document new big* formats
- src/hg/htdocs/goldenPath/help/trackDb/trackDbLibrary.shtml
- lines changed 3, context: html, text, full: html, text
57275b00fff2a36640700b50ec2af37af42fca97 Tue May 10 15:10:21 2016 -0700
changes to document new big* formats
- src/hg/htdocs/goldenPath/newsarch.html
- lines changed 44, context: html, text, full: html, text
c56502087bdb7d59041fe08c8ac09585ed274b92 Mon May 9 16:15:30 2016 -0700
Staging news release about new Gateway refs #15277
- lines changed 1, context: html, text, full: html, text
8cbf7e967bbee0fbe6819f99bc2497b633c72ac3 Tue May 10 09:09:35 2016 -0700
Editing news release about new Gateway refs #15277
- lines changed 27, context: html, text, full: html, text
46a2fce90f0f9ece6b8e0b734fc3e9a956567dc1 Tue May 10 11:01:41 2016 -0700
Made a few edits on gateway page news item.
- src/hg/htdocs/inc/jWestFooter.html
- lines changed 6, context: html, text, full: html, text
e80bfeb008dccf887c5e6d6c15b702050157b297 Tue May 10 14:10:43 2016 -0700
Temporarily changing relative URLs to absolute http://genome.ucsc.edu/ URLs for v332 release. To be reverted...
- lines changed 7, context: html, text, full: html, text
bf6a59576de3f69c5e38ace2e86d9c85a3c307b4 Wed May 11 15:39:28 2016 -0700
Undoing e80bfeb00 (absolute links to http://genome.ucsc.edu) -- as Matt suggested, use ../ relative links which takes care of hgGateway. When static pages start using inc/jWestFooter.html, we will need something like hgMenubar to adjust the links. refs #17307
- lines changed 1, context: html, text, full: html, text
bcaafef5db6eab27cf08b521cf23729b7aa08365 Thu May 12 16:05:15 2016 -0700
Oops, blog link does need to be absolute.
- src/hg/htdocs/indexNews.html
- lines changed 124, context: html, text, full: html, text
c56502087bdb7d59041fe08c8ac09585ed274b92 Mon May 9 16:15:30 2016 -0700
Staging news release about new Gateway refs #15277
- lines changed 1, context: html, text, full: html, text
8cbf7e967bbee0fbe6819f99bc2497b633c72ac3 Tue May 10 09:09:35 2016 -0700
Editing news release about new Gateway refs #15277
- lines changed 35, context: html, text, full: html, text
46a2fce90f0f9ece6b8e0b734fc3e9a956567dc1 Tue May 10 11:01:41 2016 -0700
Made a few edits on gateway page news item.
- src/hg/htdocs/staff.html
- lines changed 1, context: html, text, full: html, text
f708c7575458a0dcaae806bfb933d1be8568c417 Tue May 10 11:03:59 2016 -0700
Adding Steve to project alumni refs #17298
- src/hg/inc/bigPsl.h
- lines changed 2, context: html, text, full: html, text
3afb1ad18d251832c36c02910ba194a3996ab47a Mon May 9 14:56:22 2016 -0700
some changes to bigPsl format
- src/hg/inc/hui.h
- lines changed 2, context: html, text, full: html, text
72211d6e55ffad9e5f12048276243e79f33b71b1 Thu May 12 10:30:07 2016 -0700
remove "canDoCoverage" hg.conf variable. Density graph is now always
offered.
- lines changed 2, context: html, text, full: html, text
fbcba9729a66e8b13f23ee55da62f6b716cea1d0 Fri May 13 11:52:29 2016 -0700
Revert "remove "canDoCoverage" hg.conf variable. Density graph is now always"
This reverts commit 72211d6e55ffad9e5f12048276243e79f33b71b1.
- src/hg/inc/wikiLink.h
- lines changed 10, context: html, text, full: html, text
a240964d6dfdd6f8661487b64538d33518d88501 Mon May 16 09:38:09 2016 -0700
Added checking of wiki.loggedInCookie (numeric user ID) using random numbers as suggested by Max
if the new centralDb table gbMemberToken exists, otherwise checking the ID vs gbMembers.idx.
refs #17327
- src/hg/lib/bigPsl.as
- lines changed 2, context: html, text, full: html, text
3afb1ad18d251832c36c02910ba194a3996ab47a Mon May 9 14:56:22 2016 -0700
some changes to bigPsl format
- src/hg/lib/bigPsl.c
- lines changed 8, context: html, text, full: html, text
3afb1ad18d251832c36c02910ba194a3996ab47a Mon May 9 14:56:22 2016 -0700
some changes to bigPsl format
- src/hg/lib/cart.c
- lines changed 7, context: html, text, full: html, text
a240964d6dfdd6f8661487b64538d33518d88501 Mon May 16 09:38:09 2016 -0700
Added checking of wiki.loggedInCookie (numeric user ID) using random numbers as suggested by Max
if the new centralDb table gbMemberToken exists, otherwise checking the ID vs gbMembers.idx.
refs #17327
- src/hg/lib/customFactory.c
- lines changed 1, context: html, text, full: html, text
330109b998a61e1a9db6764b96f40dceb918ffc6 Thu May 12 16:08:34 2016 -0700
a couple of changes in response to code review
- lines changed 82, context: html, text, full: html, text
4e4629ec70e0b6635441790483d6d24bb30df91b Fri May 13 17:00:35 2016 -0700
first cut at long range interaction track
- src/hg/lib/gbMemberToken.as
- lines changed 7, context: html, text, full: html, text
a240964d6dfdd6f8661487b64538d33518d88501 Mon May 16 09:38:09 2016 -0700
Added checking of wiki.loggedInCookie (numeric user ID) using random numbers as suggested by Max
if the new centralDb table gbMemberToken exists, otherwise checking the ID vs gbMembers.idx.
refs #17327
- src/hg/lib/gbMemberToken.sql
- lines changed 13, context: html, text, full: html, text
a240964d6dfdd6f8661487b64538d33518d88501 Mon May 16 09:38:09 2016 -0700
Added checking of wiki.loggedInCookie (numeric user ID) using random numbers as suggested by Max
if the new centralDb table gbMemberToken exists, otherwise checking the ID vs gbMembers.idx.
refs #17327
- src/hg/lib/genbank.c
- lines changed 17, context: html, text, full: html, text
37f2949bd230359381df9070c80361bddc058fc3 Sat May 14 16:47:31 2016 -0700
add some logic so genbank tables are retrieved from hgFixed in genbankDb
is not in hg.conf and the table exists
- src/hg/lib/hdb.c
- lines changed 14, context: html, text, full: html, text
312123fe72695f041738fb3729961c31d5c9593e Wed May 11 10:19:13 2016 -0700
When the hgtaIntersectTable is carried over from a SQL database, but we have switched to a track hub database, various is<Type> functions were calling sql-only hdb functions. Added support for track hub db to hTableExists(); check existence before trying to determine the type of some table.
- lines changed 14, context: html, text, full: html, text
fb697a0c3d6910f8acd9725fd420f6cd42be64e9 Wed May 11 16:12:06 2016 -0700
new gbic script, refs #14399
- src/hg/lib/hgBam.c
- lines changed 13, context: html, text, full: html, text
3377b968b5f797ef07f454f5a5fb125668f6c2e4 Tue May 10 12:10:55 2016 -0700
fix a problem that shows up if neither samtabix or htslib are installed
- src/hg/lib/hui.c
- lines changed 2, context: html, text, full: html, text
ae2e455571ffc0efc3e4011688259ae72cbafd8c Wed May 11 16:49:32 2016 -0700
Print metadata directly on hgc page, rather than requiring a click through. JK request. refs #17314
- lines changed 5, context: html, text, full: html, text
72211d6e55ffad9e5f12048276243e79f33b71b1 Thu May 12 10:30:07 2016 -0700
remove "canDoCoverage" hg.conf variable. Density graph is now always
offered.
- lines changed 1, context: html, text, full: html, text
cc659a8d5b8669461e135d517eb59249de9dbbab Thu May 12 11:28:21 2016 -0700
allow coverage wiggles for bigBeds
- lines changed 1, context: html, text, full: html, text
237b5bec54fd46beff17c0271934593c15b3081b Thu May 12 17:16:42 2016 -0700
back out hasty code change to allow density graphs on too many track
types
- lines changed 5, context: html, text, full: html, text
fbcba9729a66e8b13f23ee55da62f6b716cea1d0 Fri May 13 11:52:29 2016 -0700
Revert "remove "canDoCoverage" hg.conf variable. Density graph is now always"
This reverts commit 72211d6e55ffad9e5f12048276243e79f33b71b1.
- src/hg/lib/oregannoUi.c
- lines changed 5, context: html, text, full: html, text
b8ff1764a994eff8d3f820e41ca6e0f7263a008e Mon May 9 10:12:46 2016 -0700
Adding colored labels to oreganno track controls, refs #15957
- src/hg/lib/wikiLink.c
- lines changed 12, context: html, text, full: html, text
5615ffccc75fa3e3a6b1477b696c1488a407b865 Thu May 12 13:22:56 2016 -0700
Check idx vs database -- temporary stopgap.
- lines changed 231, context: html, text, full: html, text
a240964d6dfdd6f8661487b64538d33518d88501 Mon May 16 09:38:09 2016 -0700
Added checking of wiki.loggedInCookie (numeric user ID) using random numbers as suggested by Max
if the new centralDb table gbMemberToken exists, otherwise checking the ID vs gbMembers.idx.
refs #17327
- src/hg/makeDb/doc/cavPor3.txt
- lines changed 552, context: html, text, full: html, text
1e7484608fe7cd33713c45edc146656d3127d06c Mon May 9 12:51:03 2016 -0700
done with 5-way alignment for galVar1 work refs #17180
- src/hg/makeDb/doc/ce8.txt
- lines changed 17, context: html, text, full: html, text
269ade0eca860da517c064fb6471a1bb72b26962 Fri May 13 14:43:13 2016 -0700
run up liftOver to ce11 per user Kevin Howe request no redmine
- src/hg/makeDb/doc/galGal5/initialBuild.txt
- lines changed 112, context: html, text, full: html, text
da98ad87161eefaf3d4bf83385c2eae856e2ec46 Fri May 13 15:15:27 2016 -0700
done and in the pushQ refs #17168
- src/hg/makeDb/doc/galGal5/lastzRuns.txt
- lines changed 135, context: html, text, full: html, text
6e836413b45adf79a0b6506f4d76c1821e1b688a Tue May 10 11:11:21 2016 -0700
running up rn6 and danRer10 liftOver per user request refs #17015
- src/hg/makeDb/doc/galVar1/lastzRuns.txt
- lines changed 2, context: html, text, full: html, text
3cbae2bc1a4997e656bdc5a3f0588ebc009134cb Wed May 11 13:32:21 2016 -0700
done with downloads refs #17180
- src/hg/makeDb/doc/galVar1/multiz5way.txt
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baeeba4fb0009f04327f01dd3b6368c8d627205c Wed May 11 12:44:33 2016 -0700
done with downloads refs #17180
- lines changed 2, context: html, text, full: html, text
3cbae2bc1a4997e656bdc5a3f0588ebc009134cb Wed May 11 13:32:21 2016 -0700
done with downloads refs #17180
- src/hg/makeDb/doc/mm10.txt
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cbc06c5f77761cd938db3b08adc13dc67658cabc Mon May 16 09:11:38 2016 -0700
pelSin1 lastz/chain/net for galVar1 multiz refs #17180
- src/hg/makeDb/doc/rheMac8/initialBuild.txt
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96bf3436e5aa7b0cfe55bb44ebfad252f51c248e Wed May 11 14:20:04 2016 -0700
indicate completion of augustusGenes refs #16744
- src/hg/makeDb/doc/rn6.txt
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375b96b6a8e91ea7b3949a6bc4d739267939c3ee Fri May 13 14:43:55 2016 -0700
clone ends done for rn6 refs #16100
- src/hg/makeDb/genbank/etc/genbank.conf
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a3e9f9627a0222eb703f0e6605f86f749ca62877 Wed May 11 14:43:46 2016 -0700
Added panPan2; refs #16036
- src/hg/makeDb/outside/gtexHub/README.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/buildNotes.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/genomes.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.adiposeSubcut.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.adiposeSubcut.txt
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.adiposeVisceral.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.adiposeVisceral.txt
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.adrenalGland.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.adrenalGland.txt
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.arteryAorta.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.arteryAorta.txt
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.arteryCoronary.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.arteryCoronary.txt
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.arteryTibial.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.arteryTibial.txt
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.bladder.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.brainAmygdala.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.brainAnCinCortex.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.brainCaudate.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.brainCerebelHemi.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.brainFrontCortex.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.brainFrontCortex.txt
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.brainHippocampus.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.brainHypothalamus.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.brainNucAccumbens.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.brainPutamen.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.brainSpinalcord.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.breastMamTissue.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.endocervix.txt
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.esophagusJunction.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.esophagusMucosa.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.esophagusMuscular.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.esophagusMuscular.txt
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.fallopianTube.txt
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.heartAtrialAppend.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.heartAtrialAppend.txt
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.heartLeftVentricl.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.heartLeftVentricl.txt
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.kidneyCortex.male.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.kidneyCortex.txt
- lines changed 333, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.liver.male.txt
- lines changed 864, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.liver.txt
- lines changed 1239, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.lung.male.txt
- lines changed 2100, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.lung.txt
- lines changed 3201, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.minorSalivGland.male.txt
- lines changed 441, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.minorSalivGland.txt
- lines changed 648, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.muscleSkeletal.male.txt
- lines changed 2967, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.muscleSkeletal.txt
- lines changed 4620, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.nerveTibial.male.txt
- lines changed 2097, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.nerveTibial.txt
- lines changed 3249, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.ovary.male.txt
- lines changed 0, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.ovary.txt
- lines changed 984, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.pancreas.male.txt
- lines changed 1065, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.pancreas.txt
- lines changed 1923, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.pituitary.male.txt
- lines changed 864, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.pituitary.txt
- lines changed 1221, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.prostate.male.txt
- lines changed 1146, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.prostate.txt
- lines changed 1146, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.skinExposed.male.txt
- lines changed 2397, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.skinExposed.txt
- lines changed 3726, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.skinNotExposed.male.txt
- lines changed 1821, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.skinNotExposed.txt
- lines changed 2733, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.smallIntestine.male.txt
- lines changed 636, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.smallIntestine.txt
- lines changed 1050, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.spleen.male.txt
- lines changed 681, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.spleen.txt
- lines changed 1137, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.stomach.male.txt
- lines changed 954, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.stomach.txt
- lines changed 1644, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.testis.male.txt
- lines changed 1878, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.testis.txt
- lines changed 1878, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.thyroid.male.txt
- lines changed 2025, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.thyroid.txt
- lines changed 3243, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.tissues.txt
- lines changed 901, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.txt
- lines changed 125, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.uterus.txt
- lines changed 894, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.vagina.txt
- lines changed 1050, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.wholeBlood.male.txt
- lines changed 1692, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.wholeBlood.txt
- lines changed 2757, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.xformedfibroblasts.male.txt
- lines changed 1884, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.xformedfibroblasts.txt
- lines changed 3006, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.xformedlymphocytes.male.txt
- lines changed 729, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg19/trackDb.xformedlymphocytes.txt
- lines changed 1191, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.adiposeSubcut.female.txt
- lines changed 1464, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.adiposeSubcut.male.txt
- lines changed 2247, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.adiposeSubcut.txt
- lines changed 3711, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.adiposeVisceral.female.txt
- lines changed 870, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.adiposeVisceral.male.txt
- lines changed 1500, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.adiposeVisceral.txt
- lines changed 2370, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.adrenalGland.female.txt
- lines changed 645, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.adrenalGland.male.txt
- lines changed 834, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.adrenalGland.txt
- lines changed 1479, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.arteryAorta.female.txt
- lines changed 921, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.arteryAorta.male.txt
- lines changed 1503, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.arteryAorta.txt
- lines changed 2424, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.arteryCoronary.female.txt
- lines changed 642, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.arteryCoronary.male.txt
- lines changed 768, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.arteryCoronary.txt
- lines changed 1410, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.arteryTibial.female.txt
- lines changed 1212, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.arteryTibial.male.txt
- lines changed 2100, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.arteryTibial.txt
- lines changed 3312, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.bladder.female.txt
- lines changed 36, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.bladder.male.txt
- lines changed 72, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.bladder.txt
- lines changed 108, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainAmygdala.female.txt
- lines changed 231, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainAmygdala.male.txt
- lines changed 558, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainAmygdala.txt
- lines changed 789, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainAnCinCortex.female.txt
- lines changed 261, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainAnCinCortex.male.txt
- lines changed 687, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainAnCinCortex.txt
- lines changed 948, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainCaudate.female.txt
- lines changed 330, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainCaudate.male.txt
- lines changed 924, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainCaudate.txt
- lines changed 1254, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainCerebelHemi.female.txt
- lines changed 318, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainCerebelHemi.male.txt
- lines changed 792, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainCerebelHemi.txt
- lines changed 1110, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainCerebellum.female.txt
- lines changed 483, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainCerebellum.male.txt
- lines changed 900, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainCerebellum.txt
- lines changed 1383, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainCortex.female.txt
- lines changed 378, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainCortex.male.txt
- lines changed 846, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainCortex.txt
- lines changed 1224, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainFrontCortex.female.txt
- lines changed 369, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainFrontCortex.male.txt
- lines changed 816, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainFrontCortex.txt
- lines changed 1185, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainHippocampus.female.txt
- lines changed 270, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainHippocampus.male.txt
- lines changed 684, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainHippocampus.txt
- lines changed 954, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainHypothalamus.female.txt
- lines changed 243, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainHypothalamus.male.txt
- lines changed 714, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainHypothalamus.txt
- lines changed 957, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainNucAccumbens.female.txt
- lines changed 390, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainNucAccumbens.male.txt
- lines changed 822, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainNucAccumbens.txt
- lines changed 1212, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainPutamen.female.txt
- lines changed 279, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainPutamen.male.txt
- lines changed 645, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainPutamen.txt
- lines changed 924, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainSpinalcord.female.txt
- lines changed 291, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainSpinalcord.male.txt
- lines changed 378, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainSpinalcord.txt
- lines changed 669, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainSubstanNigra.female.txt
- lines changed 258, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainSubstanNigra.male.txt
- lines changed 417, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.brainSubstanNigra.txt
- lines changed 675, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.breastMamTissue.female.txt
- lines changed 942, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.breastMamTissue.male.txt
- lines changed 1173, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.breastMamTissue.txt
- lines changed 2115, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.colonSigmoid.female.txt
- lines changed 660, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.colonSigmoid.male.txt
- lines changed 978, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.colonSigmoid.txt
- lines changed 1638, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.colonTransverse.female.txt
- lines changed 810, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.colonTransverse.male.txt
- lines changed 1155, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.colonTransverse.txt
- lines changed 1965, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.ectocervix.female.txt
- lines changed 72, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.ectocervix.txt
- lines changed 72, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.endocervix.female.txt
- lines changed 48, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.endocervix.txt
- lines changed 48, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.esophagusJunction.female.txt
- lines changed 570, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.esophagusJunction.male.txt
- lines changed 1044, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.esophagusJunction.txt
- lines changed 1614, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.esophagusMucosa.female.txt
- lines changed 1188, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.esophagusMucosa.male.txt
- lines changed 1950, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.esophagusMucosa.txt
- lines changed 3138, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.esophagusMuscular.female.txt
- lines changed 993, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.esophagusMuscular.male.txt
- lines changed 1818, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.esophagusMuscular.txt
- lines changed 2811, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.fallopianTube.female.txt
- lines changed 57, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.fallopianTube.txt
- lines changed 57, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.heartAtrialAppend.female.txt
- lines changed 729, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.heartAtrialAppend.male.txt
- lines changed 1335, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.heartAtrialAppend.txt
- lines changed 2064, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.heartLeftVentricl.female.txt
- lines changed 789, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.heartLeftVentricl.male.txt
- lines changed 1476, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.heartLeftVentricl.txt
- lines changed 2265, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.kidneyCortex.female.txt
- lines changed 69, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.kidneyCortex.male.txt
- lines changed 264, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.kidneyCortex.txt
- lines changed 333, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.liver.female.txt
- lines changed 375, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.liver.male.txt
- lines changed 864, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.liver.txt
- lines changed 1239, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.lung.female.txt
- lines changed 1101, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.lung.male.txt
- lines changed 2100, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.lung.txt
- lines changed 3201, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.minorSalivGland.female.txt
- lines changed 207, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.minorSalivGland.male.txt
- lines changed 441, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.minorSalivGland.txt
- lines changed 648, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.muscleSkeletal.female.txt
- lines changed 1653, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.muscleSkeletal.male.txt
- lines changed 2967, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.muscleSkeletal.txt
- lines changed 4620, context: html, text, full: html, text
6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
Add per-tissue tracks, in a supertrack (By Tissue). refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.nerveTibial.female.txt
- lines changed 1152, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.nerveTibial.male.txt
- lines changed 2097, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.ovary.female.txt
- lines changed 984, context: html, text, full: html, text
fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.pancreas.female.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.skinExposed.female.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.smallIntestine.female.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.stomach.female.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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- src/hg/makeDb/outside/gtexHub/hub/hg38/trackDb.xformedlymphocytes.female.txt
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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6c0e90db529a36961564b85687f88bdd74f8f813 Mon May 16 10:20:25 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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fa96258ee4ae2aafc40184f4a64b873218f8ebfb Thu May 12 16:26:51 2016 -0700
Tools, doc, and trackDb files for GTEx signal hub. refs #15647
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1639b63c7ebbb1033fa3643005081506b5371377 Thu May 12 14:26:57 2016 -0700
expand list for ncbiRefSeq gene track assembly list refs #17180
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21c69a6ff98c7494cae3fc93f3e60b4570e99c74 Thu May 12 16:24:39 2016 -0700
final bits for galGal5 refs #17168
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17cf75ea7b36e3f53c319ed6de3bd4ae7c618622 Fri May 13 14:32:40 2016 -0700
galGal5 now has ncbiRefSeq too refs #17168
- src/hg/makeDb/trackDb/chicken/galGal5/trackDb.chainNet.ra
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bca454495f096c2eef65703c7d474dc2c9017b0d Thu May 12 11:25:51 2016 -0700
adding danRer10 and rn6 chainNet tracks and overrides for galGal5 refs #17168
- src/hg/makeDb/trackDb/chicken/galGal5/trackDb.ra
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bca454495f096c2eef65703c7d474dc2c9017b0d Thu May 12 11:25:51 2016 -0700
adding danRer10 and rn6 chainNet tracks and overrides for galGal5 refs #17168
- src/hg/makeDb/trackDb/drosophila/dm2/trackDb.ra
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207fd83c1964a2bb3d5d85603ef2b7bcd5f3c5bc Thu May 12 10:54:52 2016 -0700
Removing oreganno overrides for old html page. Removed sacCer1 trackDb.ra as it would be empty after removing these lines. refs #15957
- src/hg/makeDb/trackDb/drosophila/dm3/trackDb.ra
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207fd83c1964a2bb3d5d85603ef2b7bcd5f3c5bc Thu May 12 10:54:52 2016 -0700
Removing oreganno overrides for old html page. Removed sacCer1 trackDb.ra as it would be empty after removing these lines. refs #15957
- src/hg/makeDb/trackDb/human/hg18/trackDb.ra
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207fd83c1964a2bb3d5d85603ef2b7bcd5f3c5bc Thu May 12 10:54:52 2016 -0700
Removing oreganno overrides for old html page. Removed sacCer1 trackDb.ra as it would be empty after removing these lines. refs #15957
- src/hg/makeDb/trackDb/human/hg19/trackDb.ra
- lines changed 11, context: html, text, full: html, text
0b862abd057321dcbd03197edd5624af9a32d519 Wed May 11 08:36:44 2016 -0700
fixing snpedia bug, came in through genome-www
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207fd83c1964a2bb3d5d85603ef2b7bcd5f3c5bc Thu May 12 10:54:52 2016 -0700
Removing oreganno overrides for old html page. Removed sacCer1 trackDb.ra as it would be empty after removing these lines. refs #15957
- src/hg/makeDb/trackDb/human/hg38/trackDb.145way.ra
- lines changed 114, context: html, text, full: html, text
9a5218072526a800793759c70f67b03139e6aac8 Tue May 10 15:00:20 2016 -0700
adding 145way track from Michael Hiller refs #17286
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5501c4a87072310d0a1d3cb73789afe1e1763c13 Tue May 10 15:24:24 2016 -0700
bringing in the new dbs to the lists in the sGroups refs #17286
- src/hg/makeDb/trackDb/human/hg38/trackDb.ra
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9a5218072526a800793759c70f67b03139e6aac8 Tue May 10 15:00:20 2016 -0700
adding 145way track from Michael Hiller refs #17286
- src/hg/makeDb/trackDb/human/iscaCompositeOld.html
- lines changed 146, context: html, text, full: html, text
381d06a6ca029e382a5253413f5f667b97651020 Thu May 12 14:45:22 2016 -0700
Removing file as requested, refs #16122
- src/hg/makeDb/trackDb/human/trackDb.ra
- lines changed 11, context: html, text, full: html, text
0b862abd057321dcbd03197edd5624af9a32d519 Wed May 11 08:36:44 2016 -0700
fixing snpedia bug, came in through genome-www
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1315a5df33ccf6b46dd8e7151c58ce19d95133f5 Thu May 12 12:01:07 2016 -0700
Removed release tag for beta testing ClinGen Benign CNV subtracks, refs #16122
- src/hg/makeDb/trackDb/mouse/mm9/trackDb.ra
- lines changed 4, context: html, text, full: html, text
207fd83c1964a2bb3d5d85603ef2b7bcd5f3c5bc Thu May 12 10:54:52 2016 -0700
Removing oreganno overrides for old html page. Removed sacCer1 trackDb.ra as it would be empty after removing these lines. refs #15957
- src/hg/makeDb/trackDb/sacCer/sacCer1/trackDb.ra
- lines changed 3, context: html, text, full: html, text
207fd83c1964a2bb3d5d85603ef2b7bcd5f3c5bc Thu May 12 10:54:52 2016 -0700
Removing oreganno overrides for old html page. Removed sacCer1 trackDb.ra as it would be empty after removing these lines. refs #15957
- src/hg/makeDb/trackDb/sacCer/sacCer2/trackDb.ra
- lines changed 5, context: html, text, full: html, text
207fd83c1964a2bb3d5d85603ef2b7bcd5f3c5bc Thu May 12 10:54:52 2016 -0700
Removing oreganno overrides for old html page. Removed sacCer1 trackDb.ra as it would be empty after removing these lines. refs #15957
- src/hg/makeDb/trackDb/trackDb.chainNet.ra
- lines changed 101, context: html, text, full: html, text
bca454495f096c2eef65703c7d474dc2c9017b0d Thu May 12 11:25:51 2016 -0700
adding danRer10 and rn6 chainNet tracks and overrides for galGal5 refs #17168
- src/hg/makeDb/trackDb/trackDb.chainNet.sarcopterygii.ra
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472088b461aa19de0adbbb9bcc8f77a10d1139e2 Fri May 13 06:58:59 2016 -0700
pelSin1 can get out of alpha status refs #17168
- src/hg/makeDb/trackDb/trackDb.ra
- lines changed 9, context: html, text, full: html, text
a56bfefdb7dab8ba5a3d4e2ff62cd21ff8110374 Fri May 13 14:50:02 2016 -0700
galGal5 has the ucscToRefSeq track refs #17168
- src/hg/makeDb/trackDb/ucscToRefSeq.html
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a56bfefdb7dab8ba5a3d4e2ff62cd21ff8110374 Fri May 13 14:50:02 2016 -0700
galGal5 has the ucscToRefSeq track refs #17168
- src/hg/pslCDnaFilter/makefile
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688f0de6d2a5b9875ac2cea897997e80a4a65e03 Mon May 16 10:25:55 2016 -0700
MYLIBS were out of order, and for some reason that was never a problem until this morning when the build broke when trying to link pslCDnaFilter.
- src/hg/utils/automation/makePushQSql.pl
- lines changed 16, context: html, text, full: html, text
74616f6f2fb412c64d310a0a0bc592418a658e81 Thu May 12 16:01:24 2016 -0700
verify required tables for minimal browser are present refs #17180
- src/hg/utils/bigPslToPsl/bigPslToPsl.c
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05118fa9e5d2e7b81a874c983f1571ca7df9d346 Mon May 9 15:09:05 2016 -0700
oops.. another bigPsl change
- src/hg/utils/gff3ToGenePred/gff3ToGenePred.c
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4335cbdf8003fd27e98004d989216961733f5c58 Mon May 9 15:34:07 2016 -0700
clarified meaning of gff3ToGenePred -attrsOut optiom
- src/hg/utils/otto/decipher/buildDecipher
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291feab0ee4168dfc01c56d3217b9b6fc7b24a7c Mon May 9 11:46:50 2016 -0700
A few updates/fixes to the decipher process, refs #14465
- src/hg/utils/otto/decipher/checkDecipher.sh
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291feab0ee4168dfc01c56d3217b9b6fc7b24a7c Mon May 9 11:46:50 2016 -0700
A few updates/fixes to the decipher process, refs #14465
- src/hg/utils/otto/decipher/decipherWrapper.sh
- lines changed 1, context: html, text, full: html, text
291feab0ee4168dfc01c56d3217b9b6fc7b24a7c Mon May 9 11:46:50 2016 -0700
A few updates/fixes to the decipher process, refs #14465
- src/hg/utils/otto/geneReviews/geneReviewsWrapper.sh
- lines changed 1, context: html, text, full: html, text
62064a61afbac56770f67854bf5197a0acb35a16 Mon May 9 10:54:16 2016 -0700
Updating mailto for otto tracks, refs #14465
- src/hg/utils/pslToBigPsl/pslToBigPsl.c
- lines changed 124, context: html, text, full: html, text
3afb1ad18d251832c36c02910ba194a3996ab47a Mon May 9 14:56:22 2016 -0700
some changes to bigPsl format
- src/hg/utils/refSeqGet/refSeqGet.c
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b4310bdbb2d4a0b1979f4fb1c8fc45ed521426d3 Mon May 9 15:37:39 2016 -0700
get genbank data from hgFixed
- src/inc/bedTabix.h
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4e4629ec70e0b6635441790483d6d24bb30df91b Fri May 13 17:00:35 2016 -0700
first cut at long range interaction track
- src/lib/bamFile.c
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762c15a711cbc708476298a975dc324de82e992b Wed May 11 12:32:48 2016 -0700
changed CRAM download pending message #14717
- src/lib/bedTabix.c
- lines changed 39, context: html, text, full: html, text
4e4629ec70e0b6635441790483d6d24bb30df91b Fri May 13 17:00:35 2016 -0700
first cut at long range interaction track
- src/lib/makefile
- lines changed 1, context: html, text, full: html, text
4e4629ec70e0b6635441790483d6d24bb30df91b Fri May 13 17:00:35 2016 -0700
first cut at long range interaction track
- src/product/installer/README.md
- lines changed 154, context: html, text, full: html, text
fb697a0c3d6910f8acd9725fd420f6cd42be64e9 Wed May 11 16:12:06 2016 -0700
new gbic script, refs #14399
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fb1fa5bcb4af73ca8daf0ef4d4434cde657cb7d0 Fri May 13 09:54:06 2016 -0700
readme and code cleanup, refs #14399
- src/product/installer/browserSetup.sh
- lines changed 1660, context: html, text, full: html, text
fb697a0c3d6910f8acd9725fd420f6cd42be64e9 Wed May 11 16:12:06 2016 -0700
new gbic script, refs #14399
- lines changed 15, context: html, text, full: html, text
99473ad2fa51b4235752d32c09b34b42a27c2ead Thu May 12 11:32:32 2016 -0700
fix for empty hg18/hg19 dbs and fix for ubuntu mysql restart, refs #14399
- lines changed 21, context: html, text, full: html, text
93cb084f3d19be6785771b010155b312f99f1b6d Thu May 12 12:05:21 2016 -0700
abort if user specified option at the wrong place, refs #14399
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15e84c5740f553a54bf7f51a0202c9a2ef4ba965 Thu May 12 12:09:37 2016 -0700
removing debug code from previous commit
- lines changed 1, context: html, text, full: html, text
fb1fa5bcb4af73ca8daf0ef4d4434cde657cb7d0 Fri May 13 09:54:06 2016 -0700
readme and code cleanup, refs #14399
- lines changed 6, context: html, text, full: html, text
ad4746e0c4f63006b1246f98125539b894a54d6b Fri May 13 10:31:58 2016 -0700
small typo
- lines changed 15, context: html, text, full: html, text
149b19bfc76fd7720cbc236cfcea2a5d6f49198c Fri May 13 10:41:14 2016 -0700
checking for missing assembly names, refs #14399
- lines changed 5, context: html, text, full: html, text
6538c1ec5f42fbbca3af4761bc168e1a748a0879 Fri May 13 10:52:04 2016 -0700
adding details for missing space docs, refs #14399
- lines changed 1, context: html, text, full: html, text
c55cdd5f738b93c9d5b8d5b06e7f3389a65dfb3e Fri May 13 10:56:33 2016 -0700
making wildcards more general so they work for mm9. refs #14399
- lines changed 1, context: html, text, full: html, text
97e71e2685cc0a54e89235ab258b470e077fa781 Fri May 13 11:02:23 2016 -0700
adding wildcard for snp table for mm9. refs #14399
- src/utils/qa/weeklybld/buildEnv.csh
- lines changed 2, context: html, text, full: html, text
866330207bfc065809be544929457db16c1a9ec9 Mon May 16 11:00:37 2016 -0700
v333 preview2 refs #17202
- src/utils/qa/weeklybld/buildOneUseCase
- lines changed 7, context: html, text, full: html, text
688c2522a9f59d2ebd1b90623af978034a36a9c4 Tue May 10 12:48:02 2016 -0700
fixup build scripts to use USE_SAMTABIX and USE_HTS refs #17294
- src/utils/qa/weeklybld/buildWithUseCases
- lines changed 11, context: html, text, full: html, text
688c2522a9f59d2ebd1b90623af978034a36a9c4 Tue May 10 12:48:02 2016 -0700
fixup build scripts to use USE_SAMTABIX and USE_HTS refs #17294
- lines changed 2, context: html, text, full: html, text
e9710b55585be1902cfa409f78516550ac885fa5 Tue May 10 14:38:16 2016 -0700
the USE_BAM=1 no longer works by itself refs #17294
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