File Changes for galt

v370_base to v371_preview (2018-08-20 to 2018-08-27) v371

• src/browserbox/home/browser/.bashrc
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/browserbox/home/browser/.hg.conf
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/browserbox/home/browser/downloadTools
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/browserbox/home/browser/gbibAddTools
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/browserbox/root/browserLogs/scripts/virtualBox.txt
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/browserbox/root/hg.conf.offline
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/browserbox/root/mirrorTrack
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/browserbox/root/updateBrowser.sh
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/browserbox/root/urlIsNotNewerThanFile
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/browserbox/usr/local/apache/cgi-bin/hg.conf
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/browserbox/var/spool/cron/crontabs/root
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/gfServer/README.blat
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hca/toHca/hcaStormToBundles/testIt
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/cirm/cdw/cdwSummary/cdwSummary
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/das/tests/makefile
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/encode/encodeCharts/encodeReportLib.py
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/encode/encodeDownloadsPage/encodeDownloadsPage.pl
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/encode/encodeQaCheckHgdownloadFiles/encodeQaCheckHgdownloadFiles
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/encode/encodeQaInit/encodeQaInit
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/encode/encodeStatus/hgShowEncodeSubmissions
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/encode/encodeValidate/newtest/config/cv.ra
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/encode/encodeValidate/test/makefile
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/encode/hgEncodeSubmit/README.FTP
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/encode/hgEncodeSubmit/test/functional/account_controller_test.rb
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/encode/hgEncodeSubmit/test/unit/user_test.rb
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/geoIp/README
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/hgBlatTest/makefile
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/hgMirror/hgMirror
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/hgc/lowelab.c
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    305cf5b58959929ced4acf3293ebd035bb35ff43 Mon Aug 20 14:08:40 2018 -0700
    Cleanup requested by Lowe Lab.
• src/hg/htdocs/FAQ/FAQblat.html
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/htdocs/FAQ/FAQformat.html
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/htdocs/FAQ/FAQlicense.html
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/htdocs/admin/git.html
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/htdocs/admin/jk-install.html
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/htdocs/goldenPath/gbdDescriptions.html
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/htdocs/goldenPath/gbdDescriptionsOld.html
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/htdocs/goldenPath/help/bigBed.html
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/htdocs/goldenPath/help/cram.html
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/htdocs/goldenPath/help/gbic.html
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/htdocs/goldenPath/help/mysql.html
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/htdocs/style/floretStyle.css
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/htdocs/style/jWest.css
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/js/test/README
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/js/test/jsTestDriver.conf
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/crisprTrack/crisprAddGenome.py
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/crisprTrack/lib/twobitreader/download.py
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/genbank/etc/euronode-copy
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/genbank/etc/euronode-dbload
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/genbank/makefile
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/genbank/tests/tools/optimizeTables
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/hgLoadWiggle/chkWiggleTable.sh
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/makeLoChain/makeLoChain-align.csh
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/trackDb/README
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/trackDb/checkMetaDb
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/trackDb/cv/alpha/cv.ra
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/trackDb/cv/beta/cv.ra
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/trackDb/cv/public/cv.ra
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/trackDb/ebola/eboVir3/cons160way.html
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/makeDb/trackDb/human/hg19/trackDb.ra
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/trackDb/human/hg38/altSequence.html
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/makeDb/trackDb/human/hg38/trackDb.ra
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/trackDb/loadTracks
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/trackDb/makeMetaDb
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/trackDb/template.html
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/makeDb/trackDb/uniprot.html
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/near/hgNearTest/makefile
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/phyloPng/makefile
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/hg/pyLib/hgLib.py
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
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• src/hg/txGraph/algorithms.txt
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
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• src/hg/utils/automation/doBlastzChainNet.pl
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/utils/automation/doRecipBest.pl
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/utils/automation/doSameSpeciesLiftOver.pl
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/utils/automation/genbank/README.txt
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/utils/automation/openStack/paraHubSetup.sh
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/hg/utils/genomeQuality/genomeQuality.pl
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/lib/net.c
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    c0559c7337852834308620733c839b69d07549d3 Fri Aug 24 15:33:17 2018 -0700
    Fixes problem with byterange and double redirect in net.c for example hubs and tracks hosted on hgwdev.
• src/lib/tests/fetchUrlTest.c
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    ab14d76f5c397c8c0da0192592b8600640b2669e Fri Aug 24 16:07:27 2018 -0700
    minor improvement
• src/product/README.QuickStart
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
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• src/product/README.building.source
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/product/README.install
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/product/README.local.git.source
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
• src/product/README.mysql.setup
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/product/README.requirements
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
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• src/product/ex.hg.conf
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
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• src/product/installer/README.md
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/product/installer/browserSetup.sh
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/product/minimal.hg.conf
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
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• src/product/scripts/README
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    5adcf6bc2904690de7b7b30a83ec8a7a0996abe9 Tue Aug 21 00:01:25 2018 -0700
    changing cse subdomain to soe
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    b448752a3bc70215db04d531b0841b7a9c49a459 Wed Aug 22 16:06:39 2018 -0700
    fixing genome-source URLs to use gitlist syntax
• src/product/scripts/README.trashCleaning
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• src/product/scripts/activeDbList.sh
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• src/product/scripts/fetchHgCentral.sh
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• src/product/scripts/kentSrcUpdate.sh
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