File Changes for markd
switch to commits view, user indexv391_preview to v391_preview2 (2019-11-11 to 2019-11-18) v391
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- src/hg/cirm/cdw/lib/makefile
- lines changed 1, context: html, text, full: html, text
f6b69dbcfe28da82b1250fa1b54256812f71785e Sat Nov 16 10:16:30 2019 -0800
fixed incorrect recursive make executions
- src/hg/expMatrixToJson/tests/makefile
- lines changed 2, context: html, text, full: html, text
f6b69dbcfe28da82b1250fa1b54256812f71785e Sat Nov 16 10:16:30 2019 -0800
fixed incorrect recursive make executions
- src/hg/geneBounds/clusterGenes/clusterGenes.c
- lines changed 5, context: html, text, full: html, text
06c291fd5322d86575d76d1f0f44a388371b57d7 Fri Nov 15 12:18:13 2019 -0800
added RNA and CDS lenght to clusterGene output for easy access for post-processing
- src/hg/geneBounds/clusterGenes/tests/expected/joinCdsTest.gl
- lines changed 20, context: html, text, full: html, text
06c291fd5322d86575d76d1f0f44a388371b57d7 Fri Nov 15 12:18:13 2019 -0800
added RNA and CDS lenght to clusterGene output for easy access for post-processing
- src/hg/geneBounds/clusterGenes/tests/expected/joinTest.gl
- lines changed 20, context: html, text, full: html, text
06c291fd5322d86575d76d1f0f44a388371b57d7 Fri Nov 15 12:18:13 2019 -0800
added RNA and CDS lenght to clusterGene output for easy access for post-processing
- src/hg/geneBounds/clusterGenes/tests/expected/overlapIgnoreStrandsTest.gl
- lines changed 13, context: html, text, full: html, text
06c291fd5322d86575d76d1f0f44a388371b57d7 Fri Nov 15 12:18:13 2019 -0800
added RNA and CDS lenght to clusterGene output for easy access for post-processing
- src/hg/geneBounds/clusterGenes/tests/expected/overlapUseStrandTest.gl
- lines changed 13, context: html, text, full: html, text
06c291fd5322d86575d76d1f0f44a388371b57d7 Fri Nov 15 12:18:13 2019 -0800
added RNA and CDS lenght to clusterGene output for easy access for post-processing
- src/hg/geneBounds/clusterGenes/tests/expected/refSeqCdsTest.gl
- lines changed 17, context: html, text, full: html, text
06c291fd5322d86575d76d1f0f44a388371b57d7 Fri Nov 15 12:18:13 2019 -0800
added RNA and CDS lenght to clusterGene output for easy access for post-processing
- src/hg/geneBounds/clusterGenes/tests/expected/refSeqTest.gl
- lines changed 17, context: html, text, full: html, text
06c291fd5322d86575d76d1f0f44a388371b57d7 Fri Nov 15 12:18:13 2019 -0800
added RNA and CDS lenght to clusterGene output for easy access for post-processing
- src/hg/geneBounds/clusterGenes/tests/expected/trackNamesTest.gl
- lines changed 17, context: html, text, full: html, text
06c291fd5322d86575d76d1f0f44a388371b57d7 Fri Nov 15 12:18:13 2019 -0800
added RNA and CDS lenght to clusterGene output for easy access for post-processing
- src/hg/hubApi/makefile
- lines changed 1, context: html, text, full: html, text
f6b69dbcfe28da82b1250fa1b54256812f71785e Sat Nov 16 10:16:30 2019 -0800
fixed incorrect recursive make executions
- src/hg/makeDb/doc/hg38/gencode.txt
- lines changed 44, context: html, text, full: html, text
4440223fad68a002964802e0ecf3b1b94cb28503 Sat Nov 16 10:11:29 2019 -0800
import of gencode V33 prerelase
- lines changed 12, context: html, text, full: html, text
e93b87d527fd5d292fc0dcf78ab4fc021bb9a383 Sat Nov 16 16:17:17 2019 -0800
deleted junk accidently left in build doc
- lines changed 1, context: html, text, full: html, text
1d8224c24263f3d0e6a418e59e86f5a8b867740f Sat Nov 16 16:51:42 2019 -0800
import of GENCODE VM24 prerelease
- src/hg/makeDb/doc/mm10.txt
- lines changed 36, context: html, text, full: html, text
1d8224c24263f3d0e6a418e59e86f5a8b867740f Sat Nov 16 16:51:42 2019 -0800
import of GENCODE VM24 prerelease
- src/hg/makeDb/outside/gencode/gencodeLoad.mk
- lines changed 8, context: html, text, full: html, text
4440223fad68a002964802e0ecf3b1b94cb28503 Sat Nov 16 10:11:29 2019 -0800
import of gencode V33 prerelase
- lines changed 6, context: html, text, full: html, text
1d8224c24263f3d0e6a418e59e86f5a8b867740f Sat Nov 16 16:51:42 2019 -0800
import of GENCODE VM24 prerelease
- src/hg/makeDb/schema/all.joiner
- lines changed 97, context: html, text, full: html, text
4440223fad68a002964802e0ecf3b1b94cb28503 Sat Nov 16 10:11:29 2019 -0800
import of gencode V33 prerelase
- lines changed 96, context: html, text, full: html, text
1d8224c24263f3d0e6a418e59e86f5a8b867740f Sat Nov 16 16:51:42 2019 -0800
import of GENCODE VM24 prerelease
- src/hg/makeDb/trackDb/human/hg38/trackDb.gencode.ra
- lines changed 1, context: html, text, full: html, text
4440223fad68a002964802e0ecf3b1b94cb28503 Sat Nov 16 10:11:29 2019 -0800
import of gencode V33 prerelase
- src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV33.html
- lines changed 47, context: html, text, full: html, text
4440223fad68a002964802e0ecf3b1b94cb28503 Sat Nov 16 10:11:29 2019 -0800
import of gencode V33 prerelase
- lines changed 1, context: html, text, full: html, text
c29642913564d35b1e4953e60caadd860db99874 Sat Nov 16 16:25:48 2019 -0800
fixed wrong version of upcomming ensembl release
- src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV33.ra
- lines changed 286, context: html, text, full: html, text
4440223fad68a002964802e0ecf3b1b94cb28503 Sat Nov 16 10:11:29 2019 -0800
import of gencode V33 prerelase
- lines changed 6, context: html, text, full: html, text
c29642913564d35b1e4953e60caadd860db99874 Sat Nov 16 16:25:48 2019 -0800
fixed wrong version of upcomming ensembl release
- src/hg/makeDb/trackDb/mouse/mm10/wgEncodeGencodeVM24.html
- lines changed 30, context: html, text, full: html, text
1d8224c24263f3d0e6a418e59e86f5a8b867740f Sat Nov 16 16:51:42 2019 -0800
import of GENCODE VM24 prerelease
- src/hg/makeDb/trackDb/mouse/mm10/wgEncodeGencodeVM24.ra
- lines changed 286, context: html, text, full: html, text
1d8224c24263f3d0e6a418e59e86f5a8b867740f Sat Nov 16 16:51:42 2019 -0800
import of GENCODE VM24 prerelease
- src/utils/chromToUcsc/makefile
- lines changed 2, context: html, text, full: html, text
f6b69dbcfe28da82b1250fa1b54256812f71785e Sat Nov 16 10:16:30 2019 -0800
fixed incorrect recursive make executions
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