File Changes for hiram

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v393_preview2 to v393_base (2020-01-20 to 2020-01-27) v393

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src/hg/makeDb/doc/asmHubs/asmHubs.mk
- lines changed 44, context: html, text, full: html, text
  06c02db4f03372ffd0d386846d4d9de377a36555 Wed Jan 22 14:24:30 2020 -0800
  getting the build system for assembly hubs into a single set of files for all categories of hubs refs #24812
- lines changed 13, context: html, text, full: html, text
  6c8734919a8bbcc7b0ef17a89ef86d21d80686cb Thu Jan 23 14:25:13 2020 -0800
  now using a minimal makefile and common scripts to make any assembly hub refs #24748
src/hg/makeDb/doc/asmHubs/birds.asmId.commonName.tsv
- lines changed 65, context: html, text, full: html, text
  ca0ca22adfb11121eb55173b00b4b7ccca8f8483 Fri Jan 24 10:33:49 2020 -0800
  record outputs from mkList.sh refs #24748
src/hg/makeDb/doc/asmHubs/birds.commonName.asmId.orderList.tsv
- lines changed 65, context: html, text, full: html, text
  ca0ca22adfb11121eb55173b00b4b7ccca8f8483 Fri Jan 24 10:33:49 2020 -0800
  record outputs from mkList.sh refs #24748
src/hg/makeDb/doc/asmHubs/fish.asmId.commonName.tsv
- lines changed 76, context: html, text, full: html, text
  ca0ca22adfb11121eb55173b00b4b7ccca8f8483 Fri Jan 24 10:33:49 2020 -0800
  record outputs from mkList.sh refs #24748
src/hg/makeDb/doc/asmHubs/fish.commonName.asmId.orderList.tsv
- lines changed 76, context: html, text, full: html, text
  ca0ca22adfb11121eb55173b00b4b7ccca8f8483 Fri Jan 24 10:33:49 2020 -0800
  record outputs from mkList.sh refs #24748
src/hg/makeDb/doc/asmHubs/groups.txt
- lines changed 39, context: html, text, full: html, text
  6c8734919a8bbcc7b0ef17a89ef86d21d80686cb Thu Jan 23 14:25:13 2020 -0800
  now using a minimal makefile and common scripts to make any assembly hub refs #24748
src/hg/makeDb/doc/asmHubs/mammals.asmId.commonName.tsv
- lines changed 107, context: html, text, full: html, text
  ca0ca22adfb11121eb55173b00b4b7ccca8f8483 Fri Jan 24 10:33:49 2020 -0800
  record outputs from mkList.sh refs #24748
src/hg/makeDb/doc/asmHubs/mammals.commonName.asmId.orderList.tsv
- lines changed 107, context: html, text, full: html, text
  ca0ca22adfb11121eb55173b00b4b7ccca8f8483 Fri Jan 24 10:33:49 2020 -0800
  record outputs from mkList.sh refs #24748
src/hg/makeDb/doc/asmHubs/mkAsmStats.pl
- lines changed 292, context: html, text, full: html, text
  06c02db4f03372ffd0d386846d4d9de377a36555 Wed Jan 22 14:24:30 2020 -0800
  getting the build system for assembly hubs into a single set of files for all categories of hubs refs #24812
- lines changed 6, context: html, text, full: html, text
  6c8734919a8bbcc7b0ef17a89ef86d21d80686cb Thu Jan 23 14:25:13 2020 -0800
  now using a minimal makefile and common scripts to make any assembly hub refs #24748
- lines changed 10, context: html, text, full: html, text
  cdd0101336b3399e8d1a204a298b017a2675cc3a Fri Jan 24 10:35:41 2020 -0800
  now correctly using this asmHubs directories as toolsDir to obtain commonName listings refs #24748
src/hg/makeDb/doc/asmHubs/mkGenomes.pl
- lines changed 191, context: html, text, full: html, text
  6c8734919a8bbcc7b0ef17a89ef86d21d80686cb Thu Jan 23 14:25:13 2020 -0800
  now using a minimal makefile and common scripts to make any assembly hub refs #24748
- lines changed 4, context: html, text, full: html, text
  cdd0101336b3399e8d1a204a298b017a2675cc3a Fri Jan 24 10:35:41 2020 -0800
  now correctly using this asmHubs directories as toolsDir to obtain commonName listings refs #24748
src/hg/makeDb/doc/asmHubs/mkHubIndex.pl
- lines changed 261, context: html, text, full: html, text
  6c8734919a8bbcc7b0ef17a89ef86d21d80686cb Thu Jan 23 14:25:13 2020 -0800
  now using a minimal makefile and common scripts to make any assembly hub refs #24748
- lines changed 7, context: html, text, full: html, text
  cdd0101336b3399e8d1a204a298b017a2675cc3a Fri Jan 24 10:35:41 2020 -0800
  now correctly using this asmHubs directories as toolsDir to obtain commonName listings refs #24748
src/hg/makeDb/doc/asmHubs/mkSymLinks.pl
- lines changed 90, context: html, text, full: html, text
  6c8734919a8bbcc7b0ef17a89ef86d21d80686cb Thu Jan 23 14:25:13 2020 -0800
  now using a minimal makefile and common scripts to make any assembly hub refs #24748
- lines changed 3, context: html, text, full: html, text
  cdd0101336b3399e8d1a204a298b017a2675cc3a Fri Jan 24 10:35:41 2020 -0800
  now correctly using this asmHubs directories as toolsDir to obtain commonName listings refs #24748
src/hg/makeDb/doc/asmHubs/primates.asmId.commonName.tsv
- lines changed 23, context: html, text, full: html, text
  6c8734919a8bbcc7b0ef17a89ef86d21d80686cb Thu Jan 23 14:25:13 2020 -0800
  now using a minimal makefile and common scripts to make any assembly hub refs #24748
src/hg/makeDb/doc/asmHubs/primates.commonName.asmId.orderList.tsv
- lines changed 23, context: html, text, full: html, text
  6c8734919a8bbcc7b0ef17a89ef86d21d80686cb Thu Jan 23 14:25:13 2020 -0800
  now using a minimal makefile and common scripts to make any assembly hub refs #24748
src/hg/makeDb/doc/asmHubs/vertebrate.asmId.commonName.tsv
- lines changed 25, context: html, text, full: html, text
  ca0ca22adfb11121eb55173b00b4b7ccca8f8483 Fri Jan 24 10:33:49 2020 -0800
  record outputs from mkList.sh refs #24748
src/hg/makeDb/doc/asmHubs/vertebrate.commonName.asmId.orderList.tsv
- lines changed 25, context: html, text, full: html, text
  ca0ca22adfb11121eb55173b00b4b7ccca8f8483 Fri Jan 24 10:33:49 2020 -0800
  record outputs from mkList.sh refs #24748
src/hg/makeDb/doc/birdsAsmHub/birds.taxId.list
- lines changed 73, context: html, text, full: html, text
  6f4846b142aee32ea1fe219d37516d6ed5c8e4e4 Fri Jan 24 10:23:29 2020 -0800
  now using the minimal makefile procedure with common scripts refs #24748
src/hg/makeDb/doc/birdsAsmHub/birds.xrefName.list
- lines changed 65, context: html, text, full: html, text
  6f4846b142aee32ea1fe219d37516d6ed5c8e4e4 Fri Jan 24 10:23:29 2020 -0800
  now using the minimal makefile procedure with common scripts refs #24748
src/hg/makeDb/doc/birdsAsmHub/hub.txt
- lines changed 6, context: html, text, full: html, text
  6f4846b142aee32ea1fe219d37516d6ed5c8e4e4 Fri Jan 24 10:23:29 2020 -0800
  now using the minimal makefile procedure with common scripts refs #24748
src/hg/makeDb/doc/birdsAsmHub/makefile
- lines changed 8, context: html, text, full: html, text
  6f4846b142aee32ea1fe219d37516d6ed5c8e4e4 Fri Jan 24 10:23:29 2020 -0800
  now using the minimal makefile procedure with common scripts refs #24748
src/hg/makeDb/doc/birdsAsmHub/mkList.sh
- lines changed 28, context: html, text, full: html, text
  6f4846b142aee32ea1fe219d37516d6ed5c8e4e4 Fri Jan 24 10:23:29 2020 -0800
  now using the minimal makefile procedure with common scripts refs #24748
src/hg/makeDb/doc/fishAsmHub/fish.taxId.list
- lines changed 76, context: html, text, full: html, text
  4168dd3ec951fda1bf8a881bae03cb82de890a2d Fri Jan 24 10:21:51 2020 -0800
  now using the minimal makefile procedure with common scripts refs #24748
src/hg/makeDb/doc/fishAsmHub/fish.xrefName.list
- lines changed 76, context: html, text, full: html, text
  4168dd3ec951fda1bf8a881bae03cb82de890a2d Fri Jan 24 10:21:51 2020 -0800
  now using the minimal makefile procedure with common scripts refs #24748
src/hg/makeDb/doc/fishAsmHub/hub.txt
- lines changed 6, context: html, text, full: html, text
  4168dd3ec951fda1bf8a881bae03cb82de890a2d Fri Jan 24 10:21:51 2020 -0800
  now using the minimal makefile procedure with common scripts refs #24748
src/hg/makeDb/doc/fishAsmHub/makefile
- lines changed 8, context: html, text, full: html, text
  4168dd3ec951fda1bf8a881bae03cb82de890a2d Fri Jan 24 10:21:51 2020 -0800
  now using the minimal makefile procedure with common scripts refs #24748
src/hg/makeDb/doc/fishAsmHub/mkList.sh
- lines changed 30, context: html, text, full: html, text
  4168dd3ec951fda1bf8a881bae03cb82de890a2d Fri Jan 24 10:21:51 2020 -0800
  now using the minimal makefile procedure with common scripts refs #24748
src/hg/makeDb/doc/globalReference/mkSymLinks.sh
- lines changed 3, context: html, text, full: html, text
  8a407abcc7db4a11459d510159866c30628500d6 Fri Jan 24 09:54:25 2020 -0800
  do not make symlinks to jpg files, there are none refs #24354
src/hg/makeDb/doc/mammalsAsmHub/hub.txt
- lines changed 6, context: html, text, full: html, text
  bc11548eb5339314793227ba341d159a258095de Thu Jan 23 15:19:50 2020 -0800
  now using minimal makefile and common script to construct index pages refs #24748
src/hg/makeDb/doc/mammalsAsmHub/makefile
- lines changed 6, context: html, text, full: html, text
  bc11548eb5339314793227ba341d159a258095de Thu Jan 23 15:19:50 2020 -0800
  now using minimal makefile and common script to construct index pages refs #24748
src/hg/makeDb/doc/mammalsAsmHub/mammals.taxId.list
- lines changed 104, context: html, text, full: html, text
  bf997eaafa35943b83c54e8a31e5077792b69b50 Fri Jan 24 10:30:03 2020 -0800
  record outputs from mkList.sh refs #24748
src/hg/makeDb/doc/mammalsAsmHub/mammals.xrefName.list
- lines changed 107, context: html, text, full: html, text
  bf997eaafa35943b83c54e8a31e5077792b69b50 Fri Jan 24 10:30:03 2020 -0800
  record outputs from mkList.sh refs #24748
src/hg/makeDb/doc/mammalsAsmHub/mkList.sh
- lines changed 39, context: html, text, full: html, text
  bc11548eb5339314793227ba341d159a258095de Thu Jan 23 15:19:50 2020 -0800
  now using minimal makefile and common script to construct index pages refs #24748
src/hg/makeDb/doc/primateAsmHub/groups.txt
- lines changed 39, context: html, text, full: html, text
  a7652d074beefd4f023287d09ec32bc2bbf43796 Fri Jan 24 10:26:32 2020 -0800
  now using common scripts to build hubs refs #24748
src/hg/makeDb/doc/primateAsmHub/hub.txt
- lines changed 1, context: html, text, full: html, text
  19d33fe8c7b5b90b7faa514185c79eb6af0d8d8b Tue Jan 21 13:22:47 2020 -0800
  now using new style GCF path names and separate hubs for each assembly refs #24748
- lines changed 6, context: html, text, full: html, text
  a7652d074beefd4f023287d09ec32bc2bbf43796 Fri Jan 24 10:26:32 2020 -0800
  now using common scripts to build hubs refs #24748
src/hg/makeDb/doc/primateAsmHub/makefile
- lines changed 5, context: html, text, full: html, text
  19d33fe8c7b5b90b7faa514185c79eb6af0d8d8b Tue Jan 21 13:22:47 2020 -0800
  now using new style GCF path names and separate hubs for each assembly refs #24748
- lines changed 39, context: html, text, full: html, text
  a7652d074beefd4f023287d09ec32bc2bbf43796 Fri Jan 24 10:26:32 2020 -0800
  now using common scripts to build hubs refs #24748
src/hg/makeDb/doc/primateAsmHub/mkAsmStats.pl
- lines changed 11, context: html, text, full: html, text
  19d33fe8c7b5b90b7faa514185c79eb6af0d8d8b Tue Jan 21 13:22:47 2020 -0800
  now using new style GCF path names and separate hubs for each assembly refs #24748
- lines changed 259, context: html, text, full: html, text
  a7652d074beefd4f023287d09ec32bc2bbf43796 Fri Jan 24 10:26:32 2020 -0800
  now using common scripts to build hubs refs #24748
src/hg/makeDb/doc/primateAsmHub/mkGenomes.pl
- lines changed 59, context: html, text, full: html, text
  19d33fe8c7b5b90b7faa514185c79eb6af0d8d8b Tue Jan 21 13:22:47 2020 -0800
  now using new style GCF path names and separate hubs for each assembly refs #24748
- lines changed 182, context: html, text, full: html, text
  a7652d074beefd4f023287d09ec32bc2bbf43796 Fri Jan 24 10:26:32 2020 -0800
  now using common scripts to build hubs refs #24748
src/hg/makeDb/doc/primateAsmHub/mkHubIndex.pl
- lines changed 32, context: html, text, full: html, text
  19d33fe8c7b5b90b7faa514185c79eb6af0d8d8b Tue Jan 21 13:22:47 2020 -0800
  now using new style GCF path names and separate hubs for each assembly refs #24748
- lines changed 244, context: html, text, full: html, text
  a7652d074beefd4f023287d09ec32bc2bbf43796 Fri Jan 24 10:26:32 2020 -0800
  now using common scripts to build hubs refs #24748
src/hg/makeDb/doc/primateAsmHub/mkList.sh
- lines changed 25, context: html, text, full: html, text
  a7652d074beefd4f023287d09ec32bc2bbf43796 Fri Jan 24 10:26:32 2020 -0800
  now using common scripts to build hubs refs #24748
src/hg/makeDb/doc/primateAsmHub/mkSymLinks.pl
- lines changed 46, context: html, text, full: html, text
  19d33fe8c7b5b90b7faa514185c79eb6af0d8d8b Tue Jan 21 13:22:47 2020 -0800
  now using new style GCF path names and separate hubs for each assembly refs #24748
- lines changed 180, context: html, text, full: html, text
  a7652d074beefd4f023287d09ec32bc2bbf43796 Fri Jan 24 10:26:32 2020 -0800
  now using common scripts to build hubs refs #24748
src/hg/makeDb/doc/primateAsmHub/primates.asmId.commonName.tsv
- lines changed 23, context: html, text, full: html, text
  a7652d074beefd4f023287d09ec32bc2bbf43796 Fri Jan 24 10:26:32 2020 -0800
  now using common scripts to build hubs refs #24748
src/hg/makeDb/doc/primateAsmHub/primates.commonName.asmId.orderList.tsv
- lines changed 23, context: html, text, full: html, text
  a7652d074beefd4f023287d09ec32bc2bbf43796 Fri Jan 24 10:26:32 2020 -0800
  now using common scripts to build hubs refs #24748
src/hg/makeDb/doc/primatesAsmHub/hub.txt
- lines changed 6, context: html, text, full: html, text
  9c97ac4e5ef2fb2b6ef04470ba798e0d87e5c1ce Thu Jan 23 14:23:12 2020 -0800
  now using a minimal makefile to make assembly hub index page and symlinks refs #24748
src/hg/makeDb/doc/primatesAsmHub/makefile
- lines changed 6, context: html, text, full: html, text
  9c97ac4e5ef2fb2b6ef04470ba798e0d87e5c1ce Thu Jan 23 14:23:12 2020 -0800
  now using a minimal makefile to make assembly hub index page and symlinks refs #24748
src/hg/makeDb/doc/primatesAsmHub/mkList.sh
- lines changed 25, context: html, text, full: html, text
  9c97ac4e5ef2fb2b6ef04470ba798e0d87e5c1ce Thu Jan 23 14:23:12 2020 -0800
  now using a minimal makefile to make assembly hub index page and symlinks refs #24748
src/hg/makeDb/doc/primatesAsmHub/primates.taxId.list
- lines changed 26, context: html, text, full: html, text
  d692906ff30b46e32e7634fae0865ab40d1bc557 Fri Jan 24 10:28:44 2020 -0800
  record outputs from mkList.sh refs #24748
src/hg/makeDb/doc/primatesAsmHub/primates.xrefName.list
- lines changed 23, context: html, text, full: html, text
  d692906ff30b46e32e7634fae0865ab40d1bc557 Fri Jan 24 10:28:44 2020 -0800
  record outputs from mkList.sh refs #24748
src/hg/makeDb/doc/vertebratesAsmHub/groups.txt
- lines changed 39, context: html, text, full: html, text
  f654134d5172e2687b3e6f98da7db78dd8379387 Tue Jan 21 15:01:57 2020 -0800
  initial set of files to build "other vertebrates" assembly hub refs #2482
- lines changed 39, context: html, text, full: html, text
  026fea8dd26483276dbc4d8c860ff0d11e1a640e Thu Jan 23 15:27:43 2020 -0800
  now using new minimal makefile with single set of scripts refs #24748
src/hg/makeDb/doc/vertebratesAsmHub/hub.txt
- lines changed 6, context: html, text, full: html, text
  f654134d5172e2687b3e6f98da7db78dd8379387 Tue Jan 21 15:01:57 2020 -0800
  initial set of files to build "other vertebrates" assembly hub refs #2482
src/hg/makeDb/doc/vertebratesAsmHub/makefile
- lines changed 39, context: html, text, full: html, text
  f654134d5172e2687b3e6f98da7db78dd8379387 Tue Jan 21 15:01:57 2020 -0800
  initial set of files to build "other vertebrates" assembly hub refs #2482
- lines changed 34, context: html, text, full: html, text
  831f64579844a0fbd41935fc844160991d44dbb0 Thu Jan 23 15:28:33 2020 -0800
  now using new minimal makefile with single set of scripts refs #24748
src/hg/makeDb/doc/vertebratesAsmHub/mkAsmStats.pl
- lines changed 262, context: html, text, full: html, text
  f654134d5172e2687b3e6f98da7db78dd8379387 Tue Jan 21 15:01:57 2020 -0800
  initial set of files to build "other vertebrates" assembly hub refs #2482
- lines changed 262, context: html, text, full: html, text
  026fea8dd26483276dbc4d8c860ff0d11e1a640e Thu Jan 23 15:27:43 2020 -0800
  now using new minimal makefile with single set of scripts refs #24748
src/hg/makeDb/doc/vertebratesAsmHub/mkGenomes.pl
- lines changed 182, context: html, text, full: html, text
  f654134d5172e2687b3e6f98da7db78dd8379387 Tue Jan 21 15:01:57 2020 -0800
  initial set of files to build "other vertebrates" assembly hub refs #2482
- lines changed 182, context: html, text, full: html, text
  026fea8dd26483276dbc4d8c860ff0d11e1a640e Thu Jan 23 15:27:43 2020 -0800
  now using new minimal makefile with single set of scripts refs #24748
src/hg/makeDb/doc/vertebratesAsmHub/mkHubIndex.pl
- lines changed 241, context: html, text, full: html, text
  f654134d5172e2687b3e6f98da7db78dd8379387 Tue Jan 21 15:01:57 2020 -0800
  initial set of files to build "other vertebrates" assembly hub refs #2482
- lines changed 241, context: html, text, full: html, text
  026fea8dd26483276dbc4d8c860ff0d11e1a640e Thu Jan 23 15:27:43 2020 -0800
  now using new minimal makefile with single set of scripts refs #24748
src/hg/makeDb/doc/vertebratesAsmHub/mkList.sh
- lines changed 28, context: html, text, full: html, text
  f654134d5172e2687b3e6f98da7db78dd8379387 Tue Jan 21 15:01:57 2020 -0800
  initial set of files to build "other vertebrates" assembly hub refs #2482
- lines changed 2, context: html, text, full: html, text
  831f64579844a0fbd41935fc844160991d44dbb0 Thu Jan 23 15:28:33 2020 -0800
  now using new minimal makefile with single set of scripts refs #24748
src/hg/makeDb/doc/vertebratesAsmHub/mkSymLinks.pl
- lines changed 180, context: html, text, full: html, text
  f654134d5172e2687b3e6f98da7db78dd8379387 Tue Jan 21 15:01:57 2020 -0800
  initial set of files to build "other vertebrates" assembly hub refs #2482
- lines changed 180, context: html, text, full: html, text
  026fea8dd26483276dbc4d8c860ff0d11e1a640e Thu Jan 23 15:27:43 2020 -0800
  now using new minimal makefile with single set of scripts refs #24748
src/hg/makeDb/doc/vertebratesAsmHub/vertebrate.asmId.commonName.tsv
- lines changed 25, context: html, text, full: html, text
  f654134d5172e2687b3e6f98da7db78dd8379387 Tue Jan 21 15:01:57 2020 -0800
  initial set of files to build "other vertebrates" assembly hub refs #2482
- lines changed 25, context: html, text, full: html, text
  026fea8dd26483276dbc4d8c860ff0d11e1a640e Thu Jan 23 15:27:43 2020 -0800
  now using new minimal makefile with single set of scripts refs #24748
src/hg/makeDb/doc/vertebratesAsmHub/vertebrate.commonName.asmId.orderList.tsv
- lines changed 25, context: html, text, full: html, text
  f654134d5172e2687b3e6f98da7db78dd8379387 Tue Jan 21 15:01:57 2020 -0800
  initial set of files to build "other vertebrates" assembly hub refs #2482
- lines changed 25, context: html, text, full: html, text
  026fea8dd26483276dbc4d8c860ff0d11e1a640e Thu Jan 23 15:27:43 2020 -0800
  now using new minimal makefile with single set of scripts refs #24748
src/hg/makeDb/doc/vertebratesAsmHub/vertebrate.taxId.list
- lines changed 29, context: html, text, full: html, text
  f654134d5172e2687b3e6f98da7db78dd8379387 Tue Jan 21 15:01:57 2020 -0800
  initial set of files to build "other vertebrates" assembly hub refs #2482
- lines changed 29, context: html, text, full: html, text
  9ad283f7e22efeee51bd4b183582827082494117 Thu Jan 23 15:28:14 2020 -0800
  now using new minimal makefile with single set of scripts refs #24748
- lines changed 29, context: html, text, full: html, text
  48a02b14618de832751fb89174fceaaf64becb29 Fri Jan 24 10:30:46 2020 -0800
  record outputs from mkList.sh refs #24748
src/hg/makeDb/doc/vertebratesAsmHub/vertebrate.xrefName.list
- lines changed 26, context: html, text, full: html, text
  f654134d5172e2687b3e6f98da7db78dd8379387 Tue Jan 21 15:01:57 2020 -0800
  initial set of files to build "other vertebrates" assembly hub refs #2482
- lines changed 26, context: html, text, full: html, text
  9ad283f7e22efeee51bd4b183582827082494117 Thu Jan 23 15:28:14 2020 -0800
  now using new minimal makefile with single set of scripts refs #24748
- lines changed 26, context: html, text, full: html, text
  48a02b14618de832751fb89174fceaaf64becb29 Fri Jan 24 10:30:46 2020 -0800
  record outputs from mkList.sh refs #24748
src/hg/utils/automation/asmHubGatewayPage.pl
- lines changed 39, context: html, text, full: html, text
  a4b95829492ef38feb9369fecd8a0451d35c4103 Tue Jan 21 13:21:23 2020 -0800
  now using the new style GCF path names refs #24748
src/hg/utils/automation/asmHubTrackDb.sh
- lines changed 24, context: html, text, full: html, text
  2c31dc19ba22fc34ecc65c292bfb3badf12ca7ca Thu Jan 23 14:17:34 2020 -0800
  now adding ncbiRefSeqSelectCurated track refs #24748
src/hg/utils/automation/doAssemblyHub.pl
- lines changed 2, context: html, text, full: html, text
  9d57b3048d4df5f3164f1a3f56f36a0d1f700e34 Thu Jan 23 11:02:36 2020 -0800
  need to have asmId.faSize.txt in top level directory for asmHubStats refs #24748
- lines changed 1, context: html, text, full: html, text
  e828b8c24fd241d8a974cc4d5bbccbebc9de89de Thu Jan 23 15:10:59 2020 -0800
  use warnOnly on the gff conversion in ncbiRefSeq track refs #24748
src/hg/utils/automation/doNcbiRefSeq.pl
- lines changed 34, context: html, text, full: html, text
  51d2baad200a4ef6f339fc30ec67444117153e1e Thu Jan 23 14:18:21 2020 -0800
  now adding ncbiRefSeqSelectCurated track refs #24748
- lines changed 7, context: html, text, full: html, text
  c43865d1c59800b4e4a72c9a334e51b5e103e385 Thu Jan 23 15:11:51 2020 -0800
  correctly ignore failure to find MANE or select genes refs #24748
src/hg/utils/automation/findEnsFtpNames.sh
- lines changed 14, context: html, text, full: html, text
  b1b2e5b7727c19291acb605ad561dfbd225b0496 Tue Jan 21 10:30:24 2020 -0800
  cleaning up some errors for Ensembl v99 build no redmine

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