File Changes for max

v393_preview to v393_preview2 (2020-01-13 to 2020-01-20) v393

• src/hg/hgMirror/hgMirror
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    8ab524629a1d9ac18205cfc15696a8372a43f931 Thu Jan 16 03:23:14 2020 -0800
    adding knownAttrs to hgMirror always-download table list. refs #24741
• src/hg/htdocs/FAQ/FAQgenes.html
  • lines changed 27, context: html, text, full: html, text
    772bf0ee794706c69818babdd436402a633c6090 Fri Jan 17 11:49:37 2020 +0100
    adding a section about NCBI RefSeq and knownCanonical alternatives there, refs #24780
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    841bc0ee887c7f5788a8be42094df6c1f922d24e Fri Jan 17 05:48:48 2020 -0800
    tiny fix to genes FAq, refs #24780
• src/hg/makeDb/doc/hg19.txt
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    c8d2191239de3c813f1242f38e24fa3386d88e59 Thu Jan 16 02:05:33 2020 -0800
    uniq'ing avada track, refs #24156
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    aa048e375b37cade56f3f3f2c3a35fc16fb357a0 Fri Jan 17 05:38:23 2020 -0800
    adding NCBI Refseq Select track, refs #24787
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    8ada62f0cad845d55480e7e47dcab4b246736383 Fri Jan 17 09:44:58 2020 -0800
    after feedback from Terence, fix RefSeq Select to include MANE and update the docs page. refs #24787
• src/hg/makeDb/doc/hg38/ncbiRefSeq.txt
  • lines changed 8, context: html, text, full: html, text
    aa048e375b37cade56f3f3f2c3a35fc16fb357a0 Fri Jan 17 05:38:23 2020 -0800
    adding NCBI Refseq Select track, refs #24787
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    8ada62f0cad845d55480e7e47dcab4b246736383 Fri Jan 17 09:44:58 2020 -0800
    after feedback from Terence, fix RefSeq Select to include MANE and update the docs page. refs #24787
• src/hg/makeDb/trackDb/refSeqComposite.html
  • lines changed 4, context: html, text, full: html, text
    aa048e375b37cade56f3f3f2c3a35fc16fb357a0 Fri Jan 17 05:38:23 2020 -0800
    adding NCBI Refseq Select track, refs #24787
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    8ada62f0cad845d55480e7e47dcab4b246736383 Fri Jan 17 09:44:58 2020 -0800
    after feedback from Terence, fix RefSeq Select to include MANE and update the docs page. refs #24787
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    e9653edf7779d3f1d39316d938e267d3e6e71677 Fri Jan 17 09:56:58 2020 -0800
    typo in refseq select docs, refs #24787
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    681f801323eb26cf73befd7f4cbb44f3f528e6ca Mon Jan 20 06:47:05 2020 -0800
    changing refseq select description based on terence email, refs #24780
• src/hg/makeDb/trackDb/refSeqComposite.ra
  • lines changed 12, context: html, text, full: html, text
    aa048e375b37cade56f3f3f2c3a35fc16fb357a0 Fri Jan 17 05:38:23 2020 -0800
    adding NCBI Refseq Select track, refs #24787
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    3bfcaafa2a767e8885725db659a21c4ae33f1386 Fri Jan 17 09:55:07 2020 -0800
    changing ncbi refseq title a little, refs #24787
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    681f801323eb26cf73befd7f4cbb44f3f528e6ca Mon Jan 20 06:47:05 2020 -0800
    changing refseq select description based on terence email, refs #24780
• src/hg/utils/otto/clinvar/clinVarToBed
  • lines changed 5, context: html, text, full: html, text
    9ecac913c6e52f7c7b3c957c22c6fd456f0b889c Fri Jan 17 04:46:14 2020 -0800
    adding chrMT support to clinVar, refs #24648
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    41c716e03c0390db4fd288b8df894277d1c4e998 Fri Jan 17 04:50:29 2020 -0800
    converting clinvarToBed to python3, I simply typed 2To3 -w and it seems to have worked
• src/hg/utils/otto/lovd/checkAndLoad.sh
  • lines changed 12, context: html, text, full: html, text
    8f98a9d50d12203c7a8209dfccf6ea075f10c487 Mon Jan 20 06:46:17 2020 -0800
    changing LOVD otto job to use chrMT instead of chrM, refs #24792