Commits for galt
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v278_base to v279_preview (2013-01-22 to 2013-01-29) v279
- better documentation of geoSuffix and testing
- Add ability to tolerate paths in .2bit filename with gfServer. Paths are removed leaving only the filename. Clients are on other machines and therefore cannnot use them in general.
- src/gfServer/gfServer.c - lines changed 8, context: html, text, full: html, text
- src/jkOwnLib/genoFind.c - lines changed 7, context: html, text, full: html, text
- set udc cache location early before cart and doMiddle if possible. Restoring saved sessions with bigDataUrl custom tracks was leaking to /tmp/udcCache instead of correct CGI location under trash.
- src/hg/hgTracks/hgTracks.c - lines changed 1, context: html, text, full: html, text
- src/hg/hgTracks/mainMain.c - lines changed 2, context: html, text, full: html, text
- src/hg/hgTracks/renderMain.c - lines changed 1, context: html, text, full: html, text
- Revert "Add ability to tolerate paths in .2bit filename with gfServer. Paths are removed leaving only the filename. Clients are on other machines and therefore cannnot use them in general."
This reverts commit ef98cc65cd9626157087f5ad3dd6eac5012c50d8.
Turns out that on some rare cases the relative paths were useful.
Instead will add a message to gfServer explaining better how the
paths in the filenames given will be used.
- src/gfServer/gfServer.c - lines changed 8, context: html, text, full: html, text
- src/jkOwnLib/genoFind.c - lines changed 7, context: html, text, full: html, text
- Fixed incorrect and misleading config lines in documentation for webBlat.
- src/webBlat/install.txt - lines changed 5, context: html, text, full: html, text
- Added detailed description of how paths are handled between gfServer commandline and the various clients that use gfServer.
- src/gfServer/gfServer.c - lines changed 11, context: html, text, full: html, text
- removing unneeded include
- src/hg/hgTracks/mainMain.c - lines changed 1, context: html, text, full: html, text
- Tricky cart session handling calls custom track parser early, so need to set the udc cache dir here in a CGI-independent way.
- src/hg/lib/customFactory.c - lines changed 5, context: html, text, full: html, text
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