File Changes for hiram

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v391_preview2 to v391_base (2019-11-18 to 2019-12-02) v391

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src/hg/makeDb/doc/gorGor4/initialBuild.txt
- lines changed 26, context: html, text, full: html, text
  be368356a22764aec739b020b9597b26f7e4dc88 Mon Nov 25 10:22:24 2019 -0800
  liftOvers done for gorGor4 gorGor5 gorGor6 refs #24524
src/hg/makeDb/doc/gorGor5/initialBuild.txt
- lines changed 17, context: html, text, full: html, text
  be368356a22764aec739b020b9597b26f7e4dc88 Mon Nov 25 10:22:24 2019 -0800
  liftOvers done for gorGor4 gorGor5 gorGor6 refs #24524
src/hg/makeDb/doc/gorGor6/initialBuild.txt
- lines changed 1027, context: html, text, full: html, text
  167b2c840dd247f7254cd9c900587133ba208ab0 Tue Nov 19 13:57:33 2019 -0800
  beginning gorGor6 build refs #24524
- lines changed 234, context: html, text, full: html, text
  be368356a22764aec739b020b9597b26f7e4dc88 Mon Nov 25 10:22:24 2019 -0800
  liftOvers done for gorGor4 gorGor5 gorGor6 refs #24524
src/hg/makeDb/doc/hg19.txt
- lines changed 62, context: html, text, full: html, text
  f8575fe7f3223c6279b66e2abc6b3472dad916ef Thu Nov 21 15:48:59 2019 -0800
  update ncbiRefSeq tables refs #20215
src/hg/makeDb/doc/hg38/lastzRuns.txt
- lines changed 152, context: html, text, full: html, text
  3bff517ce5a5210e0c7eb6f700b82eb0236f97f4 Tue Nov 26 12:06:36 2019 -0800
  chain/net hg38 to gorGor6 done refs #24524
- lines changed 85, context: html, text, full: html, text
  3d5b0dec29544546bf7e8be1d923433bc5d28428 Thu Nov 28 11:04:34 2019 -0800
  done with regenCho1 chainNet refs #24524
src/hg/makeDb/doc/mm10.txt
- lines changed 67, context: html, text, full: html, text
  9f28b1b4d9cd670829c4aac01d702d3d78563a79 Tue Nov 26 12:02:53 2019 -0800
  chain/net mm10 to gorGor6 done refs #24524
- lines changed 67, context: html, text, full: html, text
  3d5b0dec29544546bf7e8be1d923433bc5d28428 Thu Nov 28 11:04:34 2019 -0800
  done with regenCho1 chainNet refs #24524
src/hg/makeDb/doc/regenCho1/initialBuild.txt
- lines changed 1070, context: html, text, full: html, text
  7eb8b7de9987604dde002fcf9c7cb4f4b38e3d3e Mon Nov 25 15:43:05 2019 -0800
  begin build of regenCho1 refs #24524
- lines changed 197, context: html, text, full: html, text
  437c39fa3d4b82d90f8cddf3aae8ee1630881fa0 Tue Nov 26 13:47:13 2019 -0800
  running up liftOvers refs #24568
- lines changed 81, context: html, text, full: html, text
  8ee6e38f07d899be11e5bd15b166b251cb5420b6 Thu Nov 28 10:32:53 2019 -0800
  waiting for genbank run to complete refs #24568
src/hg/makeDb/doc/regenRn1/initialBuild.txt
- lines changed 242, context: html, text, full: html, text
  e0811dac684e59711b3aa4d635bc378d57e0c473 Thu Nov 28 10:31:35 2019 -0800
  build finished handed off to Regeneron refs #21579
src/hg/makeDb/doc/regenRn1/multiz7way.txt
- lines changed 1557, context: html, text, full: html, text
  e0811dac684e59711b3aa4d635bc378d57e0c473 Thu Nov 28 10:31:35 2019 -0800
  build finished handed off to Regeneron refs #21579
src/hg/makeDb/genbank/etc/align.dbs
- lines changed 1, context: html, text, full: html, text
  b8db48b5bb371c5212505b58abdeca12f5203fe4 Wed Nov 20 11:43:53 2019 -0800
  Added gorGor6 - gorilla refs #24524
- lines changed 1, context: html, text, full: html, text
  f8fa40f87c68cd0f464b3584823da107602bffc5 Tue Nov 26 13:11:07 2019 -0800
  Added regenCho1 - Regeneron CHO refs #24568
src/hg/makeDb/genbank/etc/genbank.conf
- lines changed 16, context: html, text, full: html, text
  7f984116bae01a32ffd01c22cbe82726bac0667c Wed Nov 20 11:19:05 2019 -0800
  Added gorGor6 gorilla; refs #24524
- lines changed 18, context: html, text, full: html, text
  cc1b0605a9857feae65b128e658a74642e876a41 Tue Nov 26 13:04:18 2019 -0800
  Added regenCho1 - Regeneron CHO refs #24568
src/hg/makeDb/genbank/etc/hgwdev.dbs
- lines changed 2, context: html, text, full: html, text
  b8db48b5bb371c5212505b58abdeca12f5203fe4 Wed Nov 20 11:43:53 2019 -0800
  Added gorGor6 - gorilla refs #24524
- lines changed 1, context: html, text, full: html, text
  f8fa40f87c68cd0f464b3584823da107602bffc5 Tue Nov 26 13:11:07 2019 -0800
  Added regenCho1 - Regeneron CHO refs #24568
src/hg/makeDb/genbank/src/lib/gbGenome.c
- lines changed 1, context: html, text, full: html, text
  7f984116bae01a32ffd01c22cbe82726bac0667c Wed Nov 20 11:19:05 2019 -0800
  Added gorGor6 gorilla; refs #24524
src/hg/makeDb/schema/all.joiner
- lines changed 9, context: html, text, full: html, text
  0b52e9bb80bffd47a0fe49aba39aa233e5a5999c Wed Nov 20 14:34:13 2019 -0800
  adding rules for gorGor6 refs #24524
- lines changed 12, context: html, text, full: html, text
  96688b9c02671c5a1119ee2a75ac0130edf711e9 Tue Nov 26 13:27:04 2019 -0800
  adding rules for regenCho1 refs #24568
src/hg/makeDb/trackDb/criGri/regenCho1/description.html
- lines changed 64, context: html, text, full: html, text
  e9629c393df4e1ca3874bf962c9aafa55df370b7 Mon Nov 25 15:16:50 2019 -0800
  initial set of files from makeGenomeDb refs #24524
- lines changed 3, context: html, text, full: html, text
  62db468c99403799c47bcf72af157e625e4c7db0 Tue Nov 26 13:34:00 2019 -0800
  adding Regeneron AGP and gap tracks from their AGP and correct cell line photograph refs #24568
src/hg/makeDb/trackDb/criGri/regenCho1/gap.html
- lines changed 31, context: html, text, full: html, text
  e9629c393df4e1ca3874bf962c9aafa55df370b7 Mon Nov 25 15:16:50 2019 -0800
  initial set of files from makeGenomeDb refs #24524
src/hg/makeDb/trackDb/criGri/regenCho1/gold.html
- lines changed 33, context: html, text, full: html, text
  e9629c393df4e1ca3874bf962c9aafa55df370b7 Mon Nov 25 15:16:50 2019 -0800
  initial set of files from makeGenomeDb refs #24524
src/hg/makeDb/trackDb/criGri/regenCho1/trackDb.ra
- lines changed 8, context: html, text, full: html, text
  e9629c393df4e1ca3874bf962c9aafa55df370b7 Mon Nov 25 15:16:50 2019 -0800
  initial set of files from makeGenomeDb refs #24524
- lines changed 25, context: html, text, full: html, text
  62db468c99403799c47bcf72af157e625e4c7db0 Tue Nov 26 13:34:00 2019 -0800
  adding Regeneron AGP and gap tracks from their AGP and correct cell line photograph refs #24568
src/hg/makeDb/trackDb/gorilla/gorGor6/description.html
- lines changed 64, context: html, text, full: html, text
  9b1768c25317ad12dce0829a6f2f36bf1f179ba3 Tue Nov 19 11:18:02 2019 -0800
  initial gorGor6 files from makeGenomeDb.pl refs #24524
src/hg/makeDb/trackDb/gorilla/gorGor6/gap.html
- lines changed 31, context: html, text, full: html, text
  9b1768c25317ad12dce0829a6f2f36bf1f179ba3 Tue Nov 19 11:18:02 2019 -0800
  initial gorGor6 files from makeGenomeDb.pl refs #24524
src/hg/makeDb/trackDb/gorilla/gorGor6/gold.html
- lines changed 34, context: html, text, full: html, text
  9b1768c25317ad12dce0829a6f2f36bf1f179ba3 Tue Nov 19 11:18:02 2019 -0800
  initial gorGor6 files from makeGenomeDb.pl refs #24524
src/hg/makeDb/trackDb/gorilla/gorGor6/trackDb.ra
- lines changed 8, context: html, text, full: html, text
  9b1768c25317ad12dce0829a6f2f36bf1f179ba3 Tue Nov 19 11:18:02 2019 -0800
  initial gorGor6 files from makeGenomeDb.pl refs #24524
- lines changed 7, context: html, text, full: html, text
  eb2bf6fbb61f74a73398179bc40429e807c5be80 Wed Nov 20 14:31:09 2019 -0800
  added search rule for gold/assembly track and ncbiRefSeq track refs #24524
src/hg/makeDb/trackDb/human/chainNetPrimate.ra
- lines changed 19, context: html, text, full: html, text
  7ad022adbcd9514fad51c749ec15feb362287b26 Mon Nov 25 10:15:20 2019 -0800
  adding gorGor6 chain/net definitions refs #24524
src/hg/makeDb/trackDb/makefile
- lines changed 1, context: html, text, full: html, text
  9b1768c25317ad12dce0829a6f2f36bf1f179ba3 Tue Nov 19 11:18:02 2019 -0800
  initial gorGor6 files from makeGenomeDb.pl refs #24524
src/hg/makeDb/trackDb/mouse/mm10/trackDb.euarchontoglireChainNet.ra
- lines changed 19, context: html, text, full: html, text
  7ad022adbcd9514fad51c749ec15feb362287b26 Mon Nov 25 10:15:20 2019 -0800
  adding gorGor6 chain/net definitions refs #24524
src/hg/makeDb/trackDb/trackDb.chainNet.mammal.ra
- lines changed 51, context: html, text, full: html, text
  60ba163cfec41900cbd7db7c31981fa7bac6e1e5 Wed Nov 27 12:06:52 2019 -0800
  adding regenCho1 chainNet refs #24568
src/hg/makeDb/trackDb/trackDb.chainNet.primates.ra
- lines changed 53, context: html, text, full: html, text
  7ad022adbcd9514fad51c749ec15feb362287b26 Mon Nov 25 10:15:20 2019 -0800
  adding gorGor6 chain/net definitions refs #24524

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