Commits for max

v492_preview to v492_preview2 (2025-12-01 to 2025-12-08) v492

cf0688e553609456a5bcd2968034cb98e37be877 Tue Dec 2 05:16:45 2025 -0800

• small updated for Finngen
  • src/hg/makeDb/trackDb/human/varFreqs.ra - lines changed 1, context: html, text, full: html, text

676b58d841804f049f720cc9ba3fddec216dae61 Tue Dec 2 06:22:46 2025 -0800

• adding saudi arabia to variant frequencies track
  • src/hg/makeDb/doc/hg38/varFreqs.txt - lines changed 8, context: html, text, full: html, text
  • src/hg/makeDb/scripts/saudiToVcf.py - lines changed 45, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/varFreqs.html - lines changed 23, context: html, text, full: html, text

83fd535ffd08aac398121175c71d9b9554c0eee1 Thu Dec 4 10:51:30 2025 -0800

• adding a few example motifs to short match track, no redmine
  • src/hg/htdocs/goldenPath/help/oligoMatch.html - lines changed 123, context: html, text, full: html, text

89c69500ae6ce997047f59a264c6a9327aaef8d2 Fri Dec 5 03:27:09 2025 -0800

• small update to build instructions, no redmine
  • src/hg/htdocs/goldenPath/help/mirrorManual.html - lines changed 2, context: html, text, full: html, text
  • src/product/mirrorManual.txt - lines changed 2, context: html, text, full: html, text

66d4db32ebb42c4b5005e6c39a733bc1b75457d0 Mon Dec 8 08:06:52 2025 -0800

• fixing clinvar bigbed type bug, refs #36810
  • src/hg/utils/otto/clinvar/clinVarToBed - lines changed 1, context: html, text, full: html, text
  • src/hg/utils/otto/clinvar/clinvarSubLolly - lines changed 2, context: html, text, full: html, text
  • src/hg/utils/otto/clinvar/doUpdate.sh - lines changed 4, context: html, text, full: html, text