All File Changes
v474_base to v475_preview (2024-11-18 to 2024-11-25) v475
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- src/hg/cirm/cdw/lib/cdwPageHeader.h
- lines changed 1, context: html, text, full: html, text
eb022bf45ea3bd084ff07a9fb307b912fe5aecea Mon Nov 18 12:44:28 2024 -0800
Updated sspsygene header files to point to new help page.
- src/hg/cirm/gateway/htdocs/help/sspsygeneHelp.html
- lines changed 398, context: html, text, full: html, text
5739d43d1b2327575637dfa12443b31ebb393730 Mon Nov 18 13:56:46 2024 -0800
Added and updated a sspsygene portal help page.
- src/hg/cirm/gateway/htdocs/inc/header.html
- lines changed 1, context: html, text, full: html, text
eb022bf45ea3bd084ff07a9fb307b912fe5aecea Mon Nov 18 12:44:28 2024 -0800
Updated sspsygene header files to point to new help page.
- src/hg/hgTracks/config.c
- lines changed 2, context: html, text, full: html, text
37fc4512f3ceca8e617a9081c7612dbf27ecb092 Tue Nov 19 23:30:12 2024 -0800
Adding 'd then v' and 'e then v' keyboard shortcuts to the Multi-Region pop-up menu. Removing 'e then v' keyboard shortcut under the 'View' menu, refs #18752
- src/hg/hgTracks/menu.c
- lines changed 1, context: html, text, full: html, text
1aac80225883641134c178ae5ab522ede14af845 Tue Nov 19 11:22:36 2024 -0800
Adding exon view (e then v) keyboard shortcut under the 'View' menu, refs #18752
- lines changed 1, context: html, text, full: html, text
37fc4512f3ceca8e617a9081c7612dbf27ecb092 Tue Nov 19 23:30:12 2024 -0800
Adding 'd then v' and 'e then v' keyboard shortcuts to the Multi-Region pop-up menu. Removing 'e then v' keyboard shortcut under the 'View' menu, refs #18752
- src/hg/htdocs/goldenPath/help/assemblyHubGuidelines.html
- lines changed 507, context: html, text, full: html, text
55a8a4f8585db6f8c52fccd4ef2dc13c2bc3e123 Fri Nov 22 14:50:06 2024 -0800
Saving Yesenia Puga's changes to the new assemblyHubGuidelines page. (github username: yesenia4022), refs #34740
- src/hg/htdocs/goldenPath/help/bigChain.html
- lines changed 18, context: html, text, full: html, text
bbf9b5788beae5c61fe8a30bc824f4b8985927e9 Wed Nov 20 10:51:05 2024 -0800
changing bigChain steps to use chainToBigChain rather than hgLoadChain, refs #33972
- src/hg/htdocs/goldenPath/help/trackDb/trackDbLibrary.shtml
- lines changed 2, context: html, text, full: html, text
bae862981809df0ebcb2737e6a83e06f8e093249 Tue Nov 19 12:06:13 2024 -0800
Fixing typos found in the code review, refs #34811
- src/hg/htdocs/goldenPath/help/vcf.html
- lines changed 23, context: html, text, full: html, text
f1bfefbd4ee51872a1da796930a0fa33f101e8e2 Fri Nov 22 14:11:06 2024 -0800
Adding documentation about using the .csi index for VCF files and adding a note about using the bigDataIndex to the list of steps to generate a VCF track, refs #28368
- src/hg/lib/sqlProg.c
- lines changed 3, context: html, text, full: html, text
a07f02977c359fe3bda4dd0893e76d3cf3c498f2 Sat Nov 23 18:45:00 2024 -0800
improved hgsql error message when hg.conf is missing. Simplified error message to remove internal and inccorect details. #20323
- src/hg/makeDb/trackDb/affyAllExonProbes.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/affyRatio.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/allenBrainAli.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/celeraCoverage.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/celeraDupPositive.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/celeraOverlay.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/chicken/galGal6/refSeqComposite.ra
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/chimp/bacEndPairs.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/cow/bosTau4/genomicSuperDups.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/cv/alpha/cv.ra
- lines changed 85, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/cv/alpha/v242_cv.ra.blame
- lines changed 28, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/cv/beta/cv.ra
- lines changed 85, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/cv/public/cv.ra
- lines changed 85, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/drosophila/dm1/pscreen.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/drosophila/dm1/trackDb.ra
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/drosophila/dm3/pscreen.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/drosophila/dm3/trackDb.ra
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/firstEF.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/fugu/fr1/genomicSuperDups.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/genomicSuperDups.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/affy10K.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/affy120K.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/affy500K.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/affyHumanExon.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/affyU133.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/affyU133Plus2.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/affyU95.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/chimpParalogy.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/chm13/trackDb.ra
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/dbSnp152.shared.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/dbSnp153Composite.html
- lines changed 3, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/encodeRecombHotspot.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/encodeRecombRate.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/hg16/affyU133.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/hg17/snpArray.html
- lines changed 4, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/hg17/trackDb.ra
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/hg18/encodeYaleChipRfbr.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/hg18/encodeYaleChipSuper.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/hg18/wgEncodeUwAffyExonArray.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/hg19/genomicSuperDups.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/hg19/genotypeArrays.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/hg19/gnomadPext.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/hg19/wgEncodeDukeAffyExon.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/hg19/wgEncodeRegTfbsClusteredV3.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/hg38/primates11way.ra
- lines changed 101, context: html, text, full: html, text
4d761d5a46757137d5855c9ce772777bd4dd6d8f Wed Nov 20 04:24:07 2024 -0800
adding fastGa on 11 primates refs #34370
- src/hg/makeDb/trackDb/human/hgdpFst.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/hgmd.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/hs1/ncbiRefSeq.trackDb.ra
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/snpMap.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/snpRecombHotspot.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/snpRecombRate.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/human/trackDb.ra
- lines changed 2, context: html, text, full: html, text
0de8053a604998b2aa5220ce404ab7953d0a2638 Mon Nov 18 16:06:12 2024 -0800
Staging the new DECIPHER container on hgwbeta, refs #34097
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/interactions.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/jaxQtlMapped.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/marmoset/calJac4/customRefSeqComposite.ra
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/affyGnfU74A.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/affyGnfU74B.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/affyGnfU74C.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/affyMOE430.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/affyMOE430v2.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/affyU74.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/cloneEndSuper.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/igtc.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/jaxAllele.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/jaxAlleleOld.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/jaxGeneTrap.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/jaxPhenotype.html
- lines changed 35, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/jaxQTL2.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/jaxQTL3.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/jaxQtl.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/jaxRepTranscript.html
- lines changed 3, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/mm10/genomicSuperDups.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/mm9/jaxAlleleLift.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/mm9/jaxPhenotypeLift.html
- lines changed 3, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/mm9/jaxQTLLift.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/mm9/jaxRepTranscriptLift.html
- lines changed 3, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/mm9/trackDb.ra
- lines changed 8, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/recombRateMouse.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/refSeqComposite.mm10.mm39.ra
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/stsMapMouseNew.html
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/mouse/trackDb.ra
- lines changed 9, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/rat/affyRAE230.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/rat/affyU34A.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/refSeqComposite.ra
- lines changed 2, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/snp.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/stsMapMouse.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/trackDb.ra
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/worm/priPac1/description.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/worm/priPac2/description.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/worm/priPac3/description.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/zebrafish/affyZebrafish.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/zebrafish/danRer1/affyZebrafish.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/zebrafish/danRer1/bacEndPairs.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/zebrafish/danRer1/bacEndSingles.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/zebrafish/danRer1/rhMap.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/zebrafish/danRer2/affyZebrafish.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/zebrafish/danRer2/bacEndPairs.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/zebrafish/danRer2/bacEndSingles.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/zebrafish/danRer2/rhMap.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/zebrafish/danRer4/rhMap.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/zebrafish/danRer5/affyZebrafish.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/makeDb/trackDb/zebrafish/danRer5/description.html
- lines changed 1, context: html, text, full: html, text
2e3c89f43f3bb9d386178270200d0acce9fc8050 Fri Nov 22 17:47:13 2024 -0800
Giving the UI link cronjob some love by fixing all the 301 redirects. These are the bulk of the items listed on the cron. No RM.
- src/hg/utils/otto/genArk/ncbiMirror/README.txt
- lines changed 274, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/allVerts.sh
- lines changed 12, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/catLists.sh
- lines changed 60, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/cladesToday.sh
- lines changed 44, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/cronUpdate.sh
- lines changed 30, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/fetch.sh
- lines changed 88, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/genbank.commonNames.pl
- lines changed 92, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/genbank.sh
- lines changed 120, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/genbank.taxonomyNames.pl
- lines changed 85, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/genbankToDo.sh
- lines changed 72, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/kuBatch.sh
- lines changed 18, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/ncbiRsync.sh
- lines changed 94, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/primates.pl
- lines changed 113, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/refseq.commonNames.pl
- lines changed 92, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/refseq.sh
- lines changed 125, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/refseq.taxonomyNames.pl
- lines changed 85, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/refseqToDo.sh
- lines changed 133, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/rerunHgwdev.sh
- lines changed 43, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/rerunKu.sh
- lines changed 40, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/runOne
- lines changed 9, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/hg/utils/otto/genArk/ncbiMirror/updateLists.sh
- lines changed 57, context: html, text, full: html, text
abbda1e28d6c297b093e998cbe6e788d36a2a04e Mon Nov 18 14:54:12 2024 -0800
documenting the processes that maintain the NCBI hierarchy here and construct the files used for hgcentral.genark and hgcentral.assemblyList tables refs #32596
- src/utils/qa/weeklybld/buildEnv.csh
- lines changed 2, context: html, text, full: html, text
0ddec6f4aadaaddad2e8209e862ba33f6d44629a Mon Nov 25 10:11:01 2024 -0800
v475 preview1, refs #34758
- lines changed: 3213
- files changed: 136