All File Changes

v393_preview to v393_preview2 (2020-01-13 to 2020-01-20) v393

• src/hg/hgCollection/hgCollection.c
  • lines changed 3, context: html, text, full: html, text
    3e29ad0059ebf3c9b781ac5317e692ae2a2687bb Tue Jan 14 23:31:45 2020 -0800
    hgCollection fiddles with the settingsHash of trackDb, which might be cached and made up of memory that shouldn't be freed. Copy the hash before fiddling with it. Found a bug in lmCloneHash (wasn't setting hash->lm correctly, so increment trackDb version just to make sure cache will be cleared.
  • lines changed 3, context: html, text, full: html, text
    2843d2cfc55054140b354bc75ad25f1eacbfda30 Wed Jan 15 23:19:30 2020 -0800
    Revert "hgCollection fiddles with the settingsHash of trackDb, which might be" This reverts commit 3e29ad0059ebf3c9b781ac5317e692ae2a2687bb.
• src/hg/hgMirror/hgMirror
  • lines changed 1, context: html, text, full: html, text
    8ab524629a1d9ac18205cfc15696a8372a43f931 Thu Jan 16 03:23:14 2020 -0800
    adding knownAttrs to hgMirror always-download table list. refs #24741
• src/hg/htdocs/FAQ/FAQblat.html
  • lines changed 1, context: html, text, full: html, text
    936744a8d9b855bfda585a0e4b25c8150c6e50b2 Mon Jan 13 13:50:10 2020 -0800
    Fixing capitalization for CR #24762
• src/hg/htdocs/FAQ/FAQgenes.html
  • lines changed 27, context: html, text, full: html, text
    772bf0ee794706c69818babdd436402a633c6090 Fri Jan 17 11:49:37 2020 +0100
    adding a section about NCBI RefSeq and knownCanonical alternatives there, refs #24780
  • lines changed 4, context: html, text, full: html, text
    841bc0ee887c7f5788a8be42094df6c1f922d24e Fri Jan 17 05:48:48 2020 -0800
    tiny fix to genes FAq, refs #24780
• src/hg/htdocs/images/Enhydra_lutris_kenyoni.jpg
  • lines changed 0, context: html, text, full: html, text
    2cf178204a34c5c97b1046415fbee5685242b440 Fri Jan 17 13:44:38 2020 -0800
    Northern sea otter photo from USFWS
• src/hg/htdocs/training/index.html
  • lines changed 10, context: html, text, full: html, text
    f00867649612c7a50039de60bc57bb80d98cdcd9 Mon Jan 13 10:00:57 2020 -0800
    adding link to KcKusic course, adding UCSF< staging Radboud pending confirmation
  • lines changed 23, context: html, text, full: html, text
    03505558172d70b467bbba84cdb6d564c3d33644 Thu Jan 16 14:42:44 2020 -0800
    removed completed PAG workshop. moved UCLA into near-future list
• src/hg/inc/trackDb.h
  • lines changed 1, context: html, text, full: html, text
    3e29ad0059ebf3c9b781ac5317e692ae2a2687bb Tue Jan 14 23:31:45 2020 -0800
    hgCollection fiddles with the settingsHash of trackDb, which might be cached and made up of memory that shouldn't be freed. Copy the hash before fiddling with it. Found a bug in lmCloneHash (wasn't setting hash->lm correctly, so increment trackDb version just to make sure cache will be cleared.
  • lines changed 1, context: html, text, full: html, text
    2843d2cfc55054140b354bc75ad25f1eacbfda30 Wed Jan 15 23:19:30 2020 -0800
    Revert "hgCollection fiddles with the settingsHash of trackDb, which might be" This reverts commit 3e29ad0059ebf3c9b781ac5317e692ae2a2687bb.
  • lines changed 1, context: html, text, full: html, text
    223c48ba609070feb1e133252b7b552186bc722f Thu Jan 16 07:19:01 2020 -0800
    increment trackDb version to make sure various experiments are expired
• src/hg/lib/hui.c
  • lines changed 3, context: html, text, full: html, text
    9557ee900a1e404bf494a01a7cfc7704f3b5c3ca Tue Jan 14 11:08:01 2020 -0800
    don't let wiggles without parents or children autoscale by group
  • lines changed 26, context: html, text, full: html, text
    911c470997f803252c2e9008b055ff61a445d30f Mon Jan 20 10:01:53 2020 -0800
    fix a problem with singleList filters
• src/hg/lib/jksql.c
  • lines changed 3, context: html, text, full: html, text
    6035e21aec008e44fb64d1a67aebf626f6a1c2cc Wed Jan 15 12:51:13 2020 -0800
    Suppressing debugging info in jksql.c as QA found it more harmful than helpful. refs#24775
  • lines changed 2, context: html, text, full: html, text
    9fc4450628347273a940ce0327519c44063084f3 Wed Jan 15 13:31:58 2020 -0800
    Brian Raney votes to restore the dumpstack here as it is helpful to programmers.
• src/hg/lib/trackDbCache.c
  • lines changed 1, context: html, text, full: html, text
    d91a1f3398f1978990bc18340a53d458f59fc0eb Tue Jan 14 10:09:00 2020 -0800
    allow user to set trackDbCacheDir to null to disable
  • lines changed 35, context: html, text, full: html, text
    3e29ad0059ebf3c9b781ac5317e692ae2a2687bb Tue Jan 14 23:31:45 2020 -0800
    hgCollection fiddles with the settingsHash of trackDb, which might be cached and made up of memory that shouldn't be freed. Copy the hash before fiddling with it. Found a bug in lmCloneHash (wasn't setting hash->lm correctly, so increment trackDb version just to make sure cache will be cleared.
  • lines changed 35, context: html, text, full: html, text
    2843d2cfc55054140b354bc75ad25f1eacbfda30 Wed Jan 15 23:19:30 2020 -0800
    Revert "hgCollection fiddles with the settingsHash of trackDb, which might be" This reverts commit 3e29ad0059ebf3c9b781ac5317e692ae2a2687bb.
  • lines changed 1, context: html, text, full: html, text
    a2a57a6247e93612140baa899ddb3c462af8f12e Wed Jan 15 23:37:27 2020 -0800
    mark hashes that are coming in from trackDb cache so they don't get freed
• src/hg/lib/vcfUi.c
  • lines changed 2, context: html, text, full: html, text
    bd6030cf816b27763b3f1d46b78895116c9317a2 Fri Jan 17 11:11:43 2020 -0800
    Fix dumb bug I introduced 3 months ago (30720cca) that broke VCF FILTER when header defines exactly one filter. refs #21805
• src/hg/makeDb/doc/hg19.txt
  • lines changed 42, context: html, text, full: html, text
    7353e83b805581aea0cb795f682ad989785a52c1 Mon Jan 13 14:44:33 2020 -0800
    Turning the dgvMerged and Supporting tables into bigBeds with a size field so trackDb filter fields can be added, refs #24749
  • lines changed 79, context: html, text, full: html, text
    0f4667da863293da78301c7341e6d14151b6458e Wed Jan 15 14:36:30 2020 -0800
    Forgot makedoc for missense constraint track and new util for converting between amino acid ranges and genomic positions, refs #24751
  • lines changed 2, context: html, text, full: html, text
    c8d2191239de3c813f1242f38e24fa3386d88e59 Thu Jan 16 02:05:33 2020 -0800
    uniq'ing avada track, refs #24156
  • lines changed 8, context: html, text, full: html, text
    aa048e375b37cade56f3f3f2c3a35fc16fb357a0 Fri Jan 17 05:38:23 2020 -0800
    adding NCBI Refseq Select track, refs #24787
  • lines changed 4, context: html, text, full: html, text
    18af2bb33abcd036c8cd8539580a8943ce8cb8ad Fri Jan 17 08:44:45 2020 -0800
    Add full path to gnomad related track building scripts, from Max email
  • lines changed 2, context: html, text, full: html, text
    8ada62f0cad845d55480e7e47dcab4b246736383 Fri Jan 17 09:44:58 2020 -0800
    after feedback from Terence, fix RefSeq Select to include MANE and update the docs page. refs #24787
• src/hg/makeDb/doc/hg38/gencode.txt
  • lines changed 36, context: html, text, full: html, text
    516ff15a73f51f29466f148d163ec3d83d9e41fb Thu Jan 16 13:45:55 2020 -0800
    import of GENCODE V33
  • lines changed 3, context: html, text, full: html, text
    5b769efe967d20b676d60303b2883e4f365e16d9 Thu Jan 16 13:53:32 2020 -0800
    import of GENCODE V33
  • lines changed 1, context: html, text, full: html, text
    75c0e5568aaddeb999f1ff3e0ad43815025979f9 Thu Jan 16 15:01:34 2020 -0800
    import of GENCODE VM24
• src/hg/makeDb/doc/hg38/ncbiRefSeq.txt
  • lines changed 8, context: html, text, full: html, text
    aa048e375b37cade56f3f3f2c3a35fc16fb357a0 Fri Jan 17 05:38:23 2020 -0800
    adding NCBI Refseq Select track, refs #24787
  • lines changed 3, context: html, text, full: html, text
    8ada62f0cad845d55480e7e47dcab4b246736383 Fri Jan 17 09:44:58 2020 -0800
    after feedback from Terence, fix RefSeq Select to include MANE and update the docs page. refs #24787
• src/hg/makeDb/doc/hg38/variation.txt
  • lines changed 14, context: html, text, full: html, text
    b6acb5dd3f5fdafad0ae7cfda25f60047823d842 Tue Jan 14 15:28:20 2020 -0800
    add _size field to hg38 dgv for filtering, refs #24749
• src/hg/makeDb/doc/mm10.txt
  • lines changed 39, context: html, text, full: html, text
    75c0e5568aaddeb999f1ff3e0ad43815025979f9 Thu Jan 16 15:01:34 2020 -0800
    import of GENCODE VM24
• src/hg/makeDb/gnomad/README
  • lines changed 2, context: html, text, full: html, text
    de2c47dedae1ebeb49de836beddb9bc6b4ca0ce0 Thu Jan 16 09:20:22 2020 -0800
    Moving gnomad scripts to their own directory under makeDb after Max email
• src/hg/makeDb/gnomad/aaToGenomic.py
  • lines changed 335, context: html, text, full: html, text
    de2c47dedae1ebeb49de836beddb9bc6b4ca0ce0 Thu Jan 16 09:20:22 2020 -0800
    Moving gnomad scripts to their own directory under makeDb after Max email
• src/hg/makeDb/gnomad/combine.awk
  • lines changed 80, context: html, text, full: html, text
    f0026f13ab0b15e4eff7093bcc7ee31e1c34770c Thu Jan 16 10:02:12 2020 -0800
    Last gnomAD related scripts to add
• src/hg/makeDb/gnomad/trimUtrs.py
  • lines changed 212, context: html, text, full: html, text
    f0026f13ab0b15e4eff7093bcc7ee31e1c34770c Thu Jan 16 10:02:12 2020 -0800
    Last gnomAD related scripts to add
• src/hg/makeDb/outside/gencode/gencodeLoad.mk
  • lines changed 4, context: html, text, full: html, text
    516ff15a73f51f29466f148d163ec3d83d9e41fb Thu Jan 16 13:45:55 2020 -0800
    import of GENCODE V33
  • lines changed 1, context: html, text, full: html, text
    75c0e5568aaddeb999f1ff3e0ad43815025979f9 Thu Jan 16 15:01:34 2020 -0800
    import of GENCODE VM24
• src/hg/makeDb/trackDb/human/avada.html
  • lines changed 1, context: html, text, full: html, text
    e1c6433a93dc02faf83c9008f7562c0ec7415bec Mon Jan 13 12:48:58 2020 -0800
    Making API link directly to help page instead of redirect refs #24763
• src/hg/makeDb/trackDb/human/hg19/defaultPriority.ra
  • lines changed 11, context: html, text, full: html, text
    7bc293b1b3c4e1e1536fa921cab42006899e740a Tue Jan 14 14:06:50 2020 -0800
    Adding filters to dgv track on hg19, refs #24749
  • lines changed 16, context: html, text, full: html, text
    cd4922328b3016ff939d0ae356f5b7a917513731 Wed Jan 15 13:27:05 2020 -0800
    Moving dgvGold track definition to the other hg19 dgvGold overrides, refs #24749
• src/hg/makeDb/trackDb/human/hg19/trackDb.gnomad.ra
  • lines changed 8, context: html, text, full: html, text
    3c2ea00993738a6899690663f6cdfd559139eced Wed Jan 15 14:05:01 2020 -0800
    Moving gnomad Missense Constraint track into pli composite, refs #24751
• src/hg/makeDb/trackDb/human/hg19/trackDb.ra
  • lines changed 1, context: html, text, full: html, text
    7bc293b1b3c4e1e1536fa921cab42006899e740a Tue Jan 14 14:06:50 2020 -0800
    Adding filters to dgv track on hg19, refs #24749
  • lines changed 14, context: html, text, full: html, text
    cd4922328b3016ff939d0ae356f5b7a917513731 Wed Jan 15 13:27:05 2020 -0800
    Moving dgvGold track definition to the other hg19 dgvGold overrides, refs #24749
• src/hg/makeDb/trackDb/human/hg38/rmskTracks.ra
  • lines changed 9, context: html, text, full: html, text
    f7ca8682f63ea274285629b6a0ca5c96e0be92db Fri Jan 17 11:50:59 2020 -0800
    add rmskHmmer updated 2020 track no redmine
• src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeSuper.html
  • lines changed 4, context: html, text, full: html, text
    516ff15a73f51f29466f148d163ec3d83d9e41fb Thu Jan 16 13:45:55 2020 -0800
    import of GENCODE V33
• src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV29.ra
  • lines changed 1, context: html, text, full: html, text
    78a9c516822466a8909ed65a7f17310a67259fb9 Wed Jan 15 12:31:41 2020 -0800
    Tweaking visibilities for back-released GENCODEv29 refs #24647
• src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV33.html
  • lines changed 1, context: html, text, full: html, text
    516ff15a73f51f29466f148d163ec3d83d9e41fb Thu Jan 16 13:45:55 2020 -0800
    import of GENCODE V33
• src/hg/makeDb/trackDb/human/trackDb.ra
  • lines changed 1, context: html, text, full: html, text
    d0cc1e441b24d78e4084ce8bee236518ed402435 Tue Jan 14 15:48:19 2020 -0800
    Adding additional linkouts for AVADA refs #24156
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    911c470997f803252c2e9008b055ff61a445d30f Mon Jan 20 10:01:53 2020 -0800
    fix a problem with singleList filters
• src/hg/makeDb/trackDb/mouse/mm10/trackDb.gencode.ra
  • lines changed 1, context: html, text, full: html, text
    75c0e5568aaddeb999f1ff3e0ad43815025979f9 Thu Jan 16 15:01:34 2020 -0800
    import of GENCODE VM24
• src/hg/makeDb/trackDb/mouse/mm10/wgEncodeGencodeSuper.html
  • lines changed 4, context: html, text, full: html, text
    75c0e5568aaddeb999f1ff3e0ad43815025979f9 Thu Jan 16 15:01:34 2020 -0800
    import of GENCODE VM24
• src/hg/makeDb/trackDb/mouse/mm10/wgEncodeGencodeVM24.html
  • lines changed 1, context: html, text, full: html, text
    75c0e5568aaddeb999f1ff3e0ad43815025979f9 Thu Jan 16 15:01:34 2020 -0800
    import of GENCODE VM24
• src/hg/makeDb/trackDb/otters/enhLutKen1/description.html
  • lines changed 64, context: html, text, full: html, text
    66d5f71af9a67acac5667ca8978a21c34afe3a8c Fri Jan 17 16:06:40 2020 -0800
    Added enhLutKen1 to DBS, refs #24790
• src/hg/makeDb/trackDb/otters/enhLutKen1/gap.html
  • lines changed 30, context: html, text, full: html, text
    66d5f71af9a67acac5667ca8978a21c34afe3a8c Fri Jan 17 16:06:40 2020 -0800
    Added enhLutKen1 to DBS, refs #24790
• src/hg/makeDb/trackDb/otters/enhLutKen1/gold.html
  • lines changed 34, context: html, text, full: html, text
    66d5f71af9a67acac5667ca8978a21c34afe3a8c Fri Jan 17 16:06:40 2020 -0800
    Added enhLutKen1 to DBS, refs #24790
• src/hg/makeDb/trackDb/otters/enhLutKen1/trackDb.ra
  • lines changed 8, context: html, text, full: html, text
    66d5f71af9a67acac5667ca8978a21c34afe3a8c Fri Jan 17 16:06:40 2020 -0800
    Added enhLutKen1 to DBS, refs #24790
• src/hg/makeDb/trackDb/refSeqComposite.html
  • lines changed 4, context: html, text, full: html, text
    aa048e375b37cade56f3f3f2c3a35fc16fb357a0 Fri Jan 17 05:38:23 2020 -0800
    adding NCBI Refseq Select track, refs #24787
  • lines changed 4, context: html, text, full: html, text
    8ada62f0cad845d55480e7e47dcab4b246736383 Fri Jan 17 09:44:58 2020 -0800
    after feedback from Terence, fix RefSeq Select to include MANE and update the docs page. refs #24787
  • lines changed 1, context: html, text, full: html, text
    e9653edf7779d3f1d39316d938e267d3e6e71677 Fri Jan 17 09:56:58 2020 -0800
    typo in refseq select docs, refs #24787
  • lines changed 4, context: html, text, full: html, text
    681f801323eb26cf73befd7f4cbb44f3f528e6ca Mon Jan 20 06:47:05 2020 -0800
    changing refseq select description based on terence email, refs #24780
• src/hg/makeDb/trackDb/refSeqComposite.ra
  • lines changed 12, context: html, text, full: html, text
    aa048e375b37cade56f3f3f2c3a35fc16fb357a0 Fri Jan 17 05:38:23 2020 -0800
    adding NCBI Refseq Select track, refs #24787
  • lines changed 2, context: html, text, full: html, text
    3bfcaafa2a767e8885725db659a21c4ae33f1386 Fri Jan 17 09:55:07 2020 -0800
    changing ncbi refseq title a little, refs #24787
  • lines changed 1, context: html, text, full: html, text
    681f801323eb26cf73befd7f4cbb44f3f528e6ca Mon Jan 20 06:47:05 2020 -0800
    changing refseq select description based on terence email, refs #24780
• src/hg/makeDb/trackDb/sacCer/sacCer3/description.html
  • lines changed 1, context: html, text, full: html, text
    df1c88e1eaaa07d8d4cb7e70f78e4bfe07d269ae Mon Jan 13 17:22:58 2020 -0800
    fixing link for #24756
• src/hg/makeDb/trackDb/stickleback/gasAcu1/multiz8way.html
  • lines changed 1, context: html, text, full: html, text
    84f787c6fe05ada5f1460557a04b0d7ae2e72613 Tue Jan 14 15:17:32 2020 -0800
    Updating redirected links found by the uiLinks cronjob for gasAcu1, no Redmine
• src/hg/utils/aaToGenomic.py
  • lines changed 335, context: html, text, full: html, text
    0f4667da863293da78301c7341e6d14151b6458e Wed Jan 15 14:36:30 2020 -0800
    Forgot makedoc for missense constraint track and new util for converting between amino acid ranges and genomic positions, refs #24751
  • lines changed 335, context: html, text, full: html, text
    de2c47dedae1ebeb49de836beddb9bc6b4ca0ce0 Thu Jan 16 09:20:22 2020 -0800
    Moving gnomad scripts to their own directory under makeDb after Max email
• src/hg/utils/automation/asmHubGap.pl
  • lines changed 2, context: html, text, full: html, text
    4bd23630e7a8c9a909c69900c8b67b992a993e91 Mon Jan 13 13:15:52 2020 -0800
    two new categories of gap types to count, repeat and contamination refs #24748
• src/hg/utils/automation/asmHubNcbiRefSeq.pl
  • lines changed 129, context: html, text, full: html, text
    608fb8b82f76fc54c4189815cad4ce27bf57b5a0 Mon Jan 13 13:16:53 2020 -0800
    now running up NCBI RefSeq track on assembly hubs refs #24748
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    940dbe5d9aa8d7d58f364d2e152324f2ec4ec331 Tue Jan 14 11:38:33 2020 -0800
    now running up ncbiRefSeq gene tracks refs #24748
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    1cf2d7c2d88b736e4d18e1bff47f16c270470ee1 Tue Jan 14 13:19:13 2020 -0800
    now have working dataVersion string in the track details page refs #24748
• src/hg/utils/automation/asmHubTrackDb.sh
  • lines changed 138, context: html, text, full: html, text
    bf7206d3cbaf92e2e3e29a3f1f966b1502d21b87 Mon Jan 13 13:18:31 2020 -0800
    now running up NCBI RefSeq track on assembly hubs refs #24748
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    940dbe5d9aa8d7d58f364d2e152324f2ec4ec331 Tue Jan 14 11:38:33 2020 -0800
    now running up ncbiRefSeq gene tracks refs #24748
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    1cf2d7c2d88b736e4d18e1bff47f16c270470ee1 Tue Jan 14 13:19:13 2020 -0800
    now have working dataVersion string in the track details page refs #24748
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    1e533950b173e658ea1f8704d9afca47ec703228 Tue Jan 14 13:46:50 2020 -0800
    now with select of name labels on items for all,curated and predicted refs #24748
• src/hg/utils/automation/doAssemblyHub.pl
  • lines changed 42, context: html, text, full: html, text
    940dbe5d9aa8d7d58f364d2e152324f2ec4ec331 Tue Jan 14 11:38:33 2020 -0800
    now running up ncbiRefSeq gene tracks refs #24748
• src/hg/utils/automation/doNcbiRefSeq.pl
  • lines changed 33, context: html, text, full: html, text
    deeb37cb48db2bb239792b0ed59889eeb271b0d6 Wed Jan 8 17:10:16 2020 -0800
    do not actually need the targeSizes option get chrom.sizes from target2bit refs #23891
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    608fb8b82f76fc54c4189815cad4ce27bf57b5a0 Mon Jan 13 13:16:53 2020 -0800
    now running up NCBI RefSeq track on assembly hubs refs #24748
  • lines changed 21, context: html, text, full: html, text
    940dbe5d9aa8d7d58f364d2e152324f2ec4ec331 Tue Jan 14 11:38:33 2020 -0800
    now running up ncbiRefSeq gene tracks refs #24748
• src/hg/utils/otto/clinvar/clinVarToBed
  • lines changed 5, context: html, text, full: html, text
    9ecac913c6e52f7c7b3c957c22c6fd456f0b889c Fri Jan 17 04:46:14 2020 -0800
    adding chrMT support to clinVar, refs #24648
  • lines changed 13, context: html, text, full: html, text
    41c716e03c0390db4fd288b8df894277d1c4e998 Fri Jan 17 04:50:29 2020 -0800
    converting clinvarToBed to python3, I simply typed 2To3 -w and it seems to have worked
• src/hg/utils/otto/lovd/checkAndLoad.sh
  • lines changed 12, context: html, text, full: html, text
    8f98a9d50d12203c7a8209dfccf6ea075f10c487 Mon Jan 20 06:46:17 2020 -0800
    changing LOVD otto job to use chrMT instead of chrM, refs #24792
• src/inc/hash.h
  • lines changed 1, context: html, text, full: html, text
    a2a57a6247e93612140baa899ddb3c462af8f12e Wed Jan 15 23:37:27 2020 -0800
    mark hashes that are coming in from trackDb cache so they don't get freed
• src/inc/localmem.h
  • lines changed 2, context: html, text, full: html, text
    3e29ad0059ebf3c9b781ac5317e692ae2a2687bb Tue Jan 14 23:31:45 2020 -0800
    hgCollection fiddles with the settingsHash of trackDb, which might be cached and made up of memory that shouldn't be freed. Copy the hash before fiddling with it. Found a bug in lmCloneHash (wasn't setting hash->lm correctly, so increment trackDb version just to make sure cache will be cleared.
  • lines changed 2, context: html, text, full: html, text
    2843d2cfc55054140b354bc75ad25f1eacbfda30 Wed Jan 15 23:19:30 2020 -0800
    Revert "hgCollection fiddles with the settingsHash of trackDb, which might be" This reverts commit 3e29ad0059ebf3c9b781ac5317e692ae2a2687bb.
• src/lib/hash.c
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    a2a57a6247e93612140baa899ddb3c462af8f12e Wed Jan 15 23:37:27 2020 -0800
    mark hashes that are coming in from trackDb cache so they don't get freed
• src/lib/localmem.c
  • lines changed 37, context: html, text, full: html, text
    3e29ad0059ebf3c9b781ac5317e692ae2a2687bb Tue Jan 14 23:31:45 2020 -0800
    hgCollection fiddles with the settingsHash of trackDb, which might be cached and made up of memory that shouldn't be freed. Copy the hash before fiddling with it. Found a bug in lmCloneHash (wasn't setting hash->lm correctly, so increment trackDb version just to make sure cache will be cleared.
  • lines changed 37, context: html, text, full: html, text
    2843d2cfc55054140b354bc75ad25f1eacbfda30 Wed Jan 15 23:19:30 2020 -0800
    Revert "hgCollection fiddles with the settingsHash of trackDb, which might be" This reverts commit 3e29ad0059ebf3c9b781ac5317e692ae2a2687bb.
• src/utils/qa/weeklybld/buildEnv.csh
  • lines changed 2, context: html, text, full: html, text
    bbecc8694c2c9f064220ee0ef703ce704418914b Mon Jan 20 10:12:11 2020 -0800
    v393 preview2, refs #24777

• lines changed: 2664
• files changed: 92