File Changes for galt

v370_preview2 to v370_base (2018-08-13 to 2018-08-20) v370

• src/hg/altSplice/affySplice/altHtmlPages.c
  • lines changed 5, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/altSplice/affySplice/altProbes.c
  • lines changed 2, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/altSplice/altSplice/altAnalysis.c
  • lines changed 2, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/altSplice/altSplice/altPaths.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/altSplice/altSplice/altSummary.c
  • lines changed 2, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/altSplice/altSplice/correlateWithExpression.c
  • lines changed 2, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/altSplice/altSplice/spliceStats.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/bedItemOverlapCount/bedItemOverlapCount.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/das/das.c
  • lines changed 2, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/encode/docId/docIdView/docIdView.c
  • lines changed 2, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/encode3/eap/eapFreen/eapFreen.c
  • lines changed 2, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/encode3/encodeDataWarehouse/oneShot/rsyncEdwExpDataType/rsyncEdwExpDataType.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/encode3/validateFiles/validateFiles.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/hgBlat/hgBlat.c
  • lines changed 6, context: html, text, full: html, text
    3ffc9f5979986da9c3b6d4094959890bab59fa9e Tue Aug 14 12:37:12 2018 -0700
    fixing unmatched html tags in hgBlat
• src/hg/hgGtexApi/hgGtexApi.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/hgLiftOver/hgLiftOver.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/hgTables/mainPage.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/hgTablesTest/hgTablesTest.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/hgTrackUi/hgTrackUi.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/hgTracks/gbrowseTest.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/hgc/hgc.c
  • lines changed 8, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/hgc/lowelab.c
  • lines changed 3, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
  • lines changed 3, context: html, text, full: html, text
    3f2e6792566fd91a20c9c892e3c29ca487c1616c Tue Aug 14 13:56:52 2018 -0700
    last minute lowelab fix. cse domain is going away.
• src/hg/js/hgTracks.js
  • lines changed 3, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/lib/fileUi.c
  • lines changed 6, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/lib/hui.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/lib/wigAsciiToBinary.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/lib/wigDataStream.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/logCrawl/hgAccessCrawl/hgAccessCrawl.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/orthoMap/orthoPickIntron.c
  • lines changed 3, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/qaPushQ/README
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/qaPushQ/qaPushQ.c
  • lines changed 8, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/sageVisCGI/sageVisCGI.c
  • lines changed 2, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/utils/automation/genbank/README.txt
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/utils/automation/genbank/gatewayPage.js
  • lines changed 4, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/utils/automation/genbank/gatewayPage.pl
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/utils/automation/genbank/hubIndexNcbi.sh
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/utils/automation/genbank/ncbiPartitionedHubIndexNcbi.sh
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/utils/automation/genbank/rmskDescription.pl
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/utils/bedExtendRanges/bedExtendRanges.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/utils/hubCheck/hubCheck.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/visiGene/hgVisiGene/README
  • lines changed 1, context: html, text, full: html, text
    bcbc5e6ebd4cf680201145e774b6e2e2dd7d192f Mon Aug 13 23:38:17 2018 -0700
    fix .cse.ucsc.edu url in hgVisigine README
• src/hg/visiGene/vgLoadAllen/vgLoadAllen.c
  • lines changed 2, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/hg/visiGene/vgLoadJax/vgLoadJax.c
  • lines changed 2, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/inc/common.mk.galt
  • lines changed 428, context: html, text, full: html, text
    a4c0a9f4b48c074daec96559640b76ab2d9db488 Mon Aug 13 16:03:28 2018 -0700
    experiment finished.
• src/jkOwnLib/gfInternal.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/lib/htmshell.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/lib/tests/htmlMimeTest.c
  • lines changed 2, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/lib/tests/makefile
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/lib/tests/udcTest.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/tracks/tracks.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/utils/bedClip/bedClip.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/utils/bedGraphToBigWig/bedGraphToBigWig.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/utils/bedToBigBed/bedToBigBed.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/utils/git-reports/git-reports.c
  • lines changed 2, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876
• src/utils/wigToBigWig/wigToBigWig.c
  • lines changed 1, context: html, text, full: html, text
    110f5e12a634db49ea9aa1ea23ff4965f1c2befe Tue Aug 14 13:48:57 2018 -0700
    changing cse to soe in domains, sometimes gi. ref #21876