All File Changes

v409_preview2 to v409_base (2021-01-11 to 2021-01-18) v409

• confs/hgwdev.hg.conf
  • lines changed 3, context: html, text, full: html, text
    991efe3f92feb12c96c0e8c618b8bb2278273349 Sun Jan 17 01:11:49 2021 -0800
    Installing updated hg.conf files from UCSC servers
• src/hca/LICENSE
  • lines changed 1, context: html, text, full: html, text
    49f37c9142eb832f5fe91d7586c7f8a0c1216953 Mon Jan 11 12:58:50 2021 -0800
    Updating copyright date to include 2021
• src/hca/hcaColorCells/hcaColorCells.c
  • lines changed 332, context: html, text, full: html, text
    4bce1472593c4e9966e54e5cf3e44dd30930a252 Tue Jan 5 23:34:51 2021 -0800
    This code that colors based on labeling some but not all of the set and dimming out the samples that are too small, is working in an ad-hoc but good for the moment way.
  • lines changed 7, context: html, text, full: html, text
    64dbe134613f4d0846e314bf4d4249814f0ea3e3 Wed Jan 6 22:09:24 2021 -0800
    Removed a loop that could be folded into it's neighbor in part so could debug easier.
  • lines changed 38, context: html, text, full: html, text
    a4a8aa46f4f60a4be71130450a0c1df2d696dd51 Mon Jan 11 13:00:40 2021 -0800
    Making this slightly better about unhexing gracefully. Arguably should put the new unpackHexString function in the hex.c/h library since hexToByte will do weird things on bad input.
• src/hca/hcaColorCells/makefile
  • lines changed 3, context: html, text, full: html, text
    4bce1472593c4e9966e54e5cf3e44dd30930a252 Tue Jan 5 23:34:51 2021 -0800
    This code that colors based on labeling some but not all of the set and dimming out the samples that are too small, is working in an ad-hoc but good for the moment way.
• src/hca/hcaUnpack5/hcaUnpack5.c
  • lines changed 81, context: html, text, full: html, text
    42fbe7842ac08e964f712072b62724f7dec7e89c Mon Jan 4 17:36:09 2021 -0800
    Refactoring in prep for moving sparseRowMatrix stuff to library
  • lines changed 109, context: html, text, full: html, text
    a3939547c53f1ccb39910e61bfa90a0c54310273 Tue Jan 5 00:40:36 2021 -0800
    First cut of vRowMatrix to stream through a variety of matrices semi-transparently I hope. FOr now just handles tsv though.
  • lines changed 1, context: html, text, full: html, text
    47f8a20771d50c3b3c24d525dee1df764be3fe1f Mon Jan 11 13:02:51 2021 -0800
    Updating usage statement
• src/hg/hgTracks/barChartTrack.c
  • lines changed 4, context: html, text, full: html, text
    05620087b2039bbaa6adbad11eabc6276df45840 Mon Jan 11 13:57:15 2021 -0800
    Changing barChart's maxViewLimit to be a floating point rather than an integer. Making logTransform have a default that can be set in trackDb.
• src/hg/hgTracks/hgTracks.c
  • lines changed 5, context: html, text, full: html, text
    2aa8c0e15867c77a3e91f0f918482497d005ffab Thu Jan 14 14:03:44 2021 -0800
    do not allow wiggle mouse over when in multi region mode refs #21980
• src/hg/hgc/barChartClick.c
  • lines changed 12, context: html, text, full: html, text
    ea1646068170b191834889377e21b1bd51259175 Mon Jan 11 12:56:25 2021 -0800
    Putting this under control of svgBarChart variable in hg.conf to keep feature from leaking to users too soon. Changing N column display of numbers to be right justified as numbers usually are. Looking up with names in stats table with and without underbars..
• src/hg/htdocs/FAQ/index.html
  • lines changed 49, context: html, text, full: html, text
    bbece7a0e3c096489e38dd313ec219f2dd3e8867 Tue Jan 12 18:25:55 2021 -0800
    Fixing error messsage on search boxes, adding wiki search, re-ordering page to match GA, and sprucing up page refs #26784, 25734
  • lines changed 1, context: html, text, full: html, text
    455f6b9cbb90c404669bfb2b6b3780b6986b7d18 Wed Jan 13 12:28:07 2021 -0800
    minor word change #26784
• src/hg/htdocs/covid19.html
  • lines changed 10, context: html, text, full: html, text
    6fd9416229984d48830cdf31d99faeeac3535a4a Mon Jan 11 10:45:47 2021 -0800
    Adding latest wuhCor1 release to resource page refs #26777
• src/hg/htdocs/goldenPath/help/mirrorManual.html
  • lines changed 15, context: html, text, full: html, text
    c32ce9782f4e1c33cd5b56ceeaa1e7b51f38af3c Fri Jan 15 11:30:46 2021 -0800
    Fixing broken 404s, style conforming refs #9677
  • lines changed 18, context: html, text, full: html, text
    137ed8747d9f60221804a52022d75b5dc68730b0 Fri Jan 15 11:49:54 2021 -0800
    Sprucing up fonts doc refs #25525
  • lines changed 86, context: html, text, full: html, text
    9a24777746faaa236ab0bace91c6208091ea746a Fri Jan 15 14:55:33 2021 -0800
    forgot to add the html file, refs #25525
• src/hg/htdocs/goldenPath/history.html
  • lines changed 1, context: html, text, full: html, text
    8653c60d342ef52957ac0df250c5e970327d062d Fri Jan 15 10:53:47 2021 -0800
    Shortening the name of a photo on the history page from code review, refs #26791
• src/hg/htdocs/goldenPath/newsarch.html
  • lines changed 0, context: html, text, full: html, text
    e9b0a83bb105e6f22fa78fd8af05229235980916 Mon Jan 11 15:03:40 2021 -0800
    Code review edits, adding a space between href and target=_blank to GBiB link for readability, refs #26792
  • lines changed 35, context: html, text, full: html, text
    876bcf570de7ff8b738706ece675c2c85a51c331 Wed Jan 13 15:23:25 2021 -0800
    News announcement for new GENCODE track releases V35/V36 refs #26716
• src/hg/htdocs/images/Jim-Kent-David-Haussler-Patrick-Gavin-Scot-Kennedy-genome-assembly-era-Group-2000.jpg
  • lines changed 0, context: html, text, full: html, text
    8653c60d342ef52957ac0df250c5e970327d062d Fri Jan 15 10:53:47 2021 -0800
    Shortening the name of a photo on the history page from code review, refs #26791
• src/hg/htdocs/images/genomeAssemblyEraGroup2000.jpg
  • lines changed 0, context: html, text, full: html, text
    8653c60d342ef52957ac0df250c5e970327d062d Fri Jan 15 10:53:47 2021 -0800
    Shortening the name of a photo on the history page from code review, refs #26791
• src/hg/htdocs/inc/gbPageStart.html
  • lines changed 4, context: html, text, full: html, text
    b32f0ef8402a62095e6db085ee27ef933af441dc Tue Jan 12 03:22:40 2021 -0800
    changes after code review to fix utf8 output from pandoc for our latin1 old school webserver. refs #26789
• src/hg/htdocs/indexNews.html
  • lines changed 12, context: html, text, full: html, text
    876bcf570de7ff8b738706ece675c2c85a51c331 Wed Jan 13 15:23:25 2021 -0800
    News announcement for new GENCODE track releases V35/V36 refs #26716
• src/hg/inc/barChartUi.h
  • lines changed 8, context: html, text, full: html, text
    3d1baa9a169fe449fc22aa04eaf02a3ae137781d Mon Jan 11 15:01:03 2021 -0800
    Making transformFunc apply to barCharts. Adding barChartLimit.
• src/hg/inc/trackDb.h
  • lines changed 5, context: html, text, full: html, text
    2c8912b056f0460badfcad9cce2e5c0a8c290c6d Tue Jan 12 18:06:55 2021 -0800
    Refactoring code so that in both hubs and in built in tracks the same trackDb fields are D substituted for file names so they don't have to be maintained in parallel. Build a new trackSettingIsFile routine to enable this and am calling it in the two places that used to decide whether to do a substitution.
• src/hg/inc/versionInfo.h
  • lines changed 1, context: html, text, full: html, text
    0db4ddfb542d0b3045cc80ce9de099bd4f005a9f Mon Jan 18 10:06:26 2021 -0800
    New version number v409
• src/hg/js/hgTracks.js
  • lines changed 1, context: html, text, full: html, text
    d4a8262db6dfa1e7fe92f2975298529d152bbd95 Mon Jan 11 14:11:01 2021 -0800
    no more urlencoded letters in the right click menu, refs #26687
  • lines changed 6, context: html, text, full: html, text
    c2cb27e5edce6f83d4b62aee5ccc623d499f2c7c Fri Jan 15 03:17:41 2021 -0800
    escaping + signs from the right-click menu, refs #26687
• src/hg/js/hui.js
  • lines changed 3, context: html, text, full: html, text
    64b234ddbabf4a10b74d3797cb3ee32a9ec30436 Fri Jan 15 10:38:06 2021 -0800
    allow dots in genome assembly names for composite chainNet tracks refs #26584
• src/hg/lib/barChartUi.c
  • lines changed 29, context: html, text, full: html, text
    a1e57595bda0dc8a20c2548f47a4874ebe29e37b Mon Jan 11 14:37:05 2021 -0800
    Making log-transformable for barCharts be settable via transformFunc trackDb setting. Factoring out barChartCurViewMax for reuse elsewhere.
  • lines changed 6, context: html, text, full: html, text
    e302bb6915d4003f97dacfa9637e78dc0fb98303 Tue Jan 12 18:44:00 2021 -0800
    Fixing logic error I recently introduced. The checkbox by the log-transform on barCharts should behave better now.
• src/hg/lib/gencodeBGP.as
  • lines changed 2, context: html, text, full: html, text
    834f8db0db217654d786090bd9e25ad92292ee4e Wed Jan 13 11:20:37 2021 -0800
    ongoing work on UCSC genes
• src/hg/lib/psl.as
  • lines changed 25, context: html, text, full: html, text
    40b54767ef31844fc6693a1ad26737daa8935488 Tue Jan 12 16:41:07 2021 -0800
    moving psl.as to hg/lib so buildTableDescriptions can find it.
• src/hg/lib/simpleBarChartBed.as
  • lines changed 13, context: html, text, full: html, text
    5c53721cad04423b6081f27b315b0d584807a0ea Wed Jan 6 16:04:43 2021 -0800
    Added a barChart with fewer fields because I don't have and index for exprMatrix.
  • lines changed 1, context: html, text, full: html, text
    cf897e4aa00e43dd707f6f2b1aa79020bc804445 Mon Jan 11 14:38:30 2021 -0800
    Shortening a description.
  • lines changed 1, context: html, text, full: html, text
    43436c471e8e0c1fc922f45e10b8e8e079f0a59d Tue Jan 12 11:09:23 2021 -0800
    Changing table name
• src/hg/lib/trackDbCustom.c
  • lines changed 12, context: html, text, full: html, text
    2c8912b056f0460badfcad9cce2e5c0a8c290c6d Tue Jan 12 18:06:55 2021 -0800
    Refactoring code so that in both hubs and in built in tracks the same trackDb fields are D substituted for file names so they don't have to be maintained in parallel. Build a new trackSettingIsFile routine to enable this and am calling it in the two places that used to decide whether to do a substitution.
• src/hg/lib/trackHub.c
  • lines changed 11, context: html, text, full: html, text
    2c8912b056f0460badfcad9cce2e5c0a8c290c6d Tue Jan 12 18:06:55 2021 -0800
    Refactoring code so that in both hubs and in built in tracks the same trackDb fields are D substituted for file names so they don't have to be maintained in parallel. Build a new trackSettingIsFile routine to enable this and am calling it in the two places that used to decide whether to do a substitution.
• src/hg/lib/wiggleCart.c
  • lines changed 19, context: html, text, full: html, text
    9a1dd73f2df69278e2b5ab8c62d531205ab87845 Tue Jan 12 12:12:46 2021 -0800
    As for wiggle, make bigWig's viewLimits min and max come from the data. (Fun fact: viewLimitsMax is implemented only for composites. It should come from the data anyway).
• src/hg/makeDb/doc/hg38/hg38.txt
  • lines changed 4, context: html, text, full: html, text
    a2c93356f18957d5cea8c5ec44cb005a2ce03d02 Fri Jan 15 15:41:54 2021 -0800
    LRG track updates refs #24672
• src/hg/makeDb/doc/mm39/multiz35way.txt
  • lines changed 67, context: html, text, full: html, text
    a13aa5141f01eff76a3e30cf04b9c2a7710d90b7 Mon Jan 11 16:31:50 2021 -0800
    ready for pushQ entry refs #26584
  • lines changed 6, context: html, text, full: html, text
    7b30ef825674d882bd0bd17f31e72b4838f2ec6e Fri Jan 15 11:07:31 2021 -0800
    pushQ ready refs #26584
• src/hg/makeDb/doc/ucscGenes/hg38.gencodeV35.sh
  • lines changed 34, context: html, text, full: html, text
    834f8db0db217654d786090bd9e25ad92292ee4e Wed Jan 13 11:20:37 2021 -0800
    ongoing work on UCSC genes
• src/hg/makeDb/doc/ucscGenes/hg38.gencodeV36.sh
  • lines changed 514, context: html, text, full: html, text
    35f0b044b134e2521282ab29c350138c2b59823a Fri Jan 15 11:51:12 2021 -0800
    starting on gencodeV36 version of knownGene
• src/hg/makeDb/doc/wuhCor1/phylogenetics.txt
  • lines changed 19, context: html, text, full: html, text
    9328f9679316e58caa157cbb591ab022ad4874d9 Tue Jan 12 10:38:13 2021 -0800
    A little more cleanup: regenerate protobufs with updated names.
• src/hg/makeDb/hgTrackDb/hgTrackDb.c
  • lines changed 1, context: html, text, full: html, text
    58082337569fd56e1150c52f0a55955ee42e71c5 Mon Jan 11 14:43:34 2021 -0800
    Making getBarChartStatsUrl get variable substituted.
  • lines changed 6, context: html, text, full: html, text
    2c8912b056f0460badfcad9cce2e5c0a8c290c6d Tue Jan 12 18:06:55 2021 -0800
    Refactoring code so that in both hubs and in built in tracks the same trackDb fields are D substituted for file names so they don't have to be maintained in parallel. Build a new trackSettingIsFile routine to enable this and am calling it in the two places that used to decide whether to do a substitution.
• src/hg/makeDb/trackDb/human/cadd.ra
  • lines changed 43, context: html, text, full: html, text
    cd11b2eb813eb98b57ab3bbebd32c9a86737c9d5 Mon Jan 18 02:45:56 2021 -0800
    adding CADD track, refs #18492
  • lines changed 2, context: html, text, full: html, text
    cab4e89a21f05ccc7633f251676b5db47614d3ac Mon Jan 18 04:57:13 2021 -0800
    making CADD full mode a bit denser, refs #18492. MaxWindowToDraw doesn't seem to work.
• src/hg/makeDb/trackDb/human/chainNetPlacental.ra
  • lines changed 15, context: html, text, full: html, text
    7df5b37cb3af51f3d02ca739a94f4803962e1d53 Fri Jan 15 16:25:12 2021 -0800
    make canFam5 chainNet alpha release only refs #25917
• src/hg/makeDb/trackDb/human/covidHgiGwas.ra
  • lines changed 1, context: html, text, full: html, text
    12d231405f3318f78660444f9197be67d57bd450 Mon Jan 11 11:32:49 2021 -0800
    CR fix refs #26794
• src/hg/makeDb/trackDb/human/covidHgiGwasR4.html
  • lines changed 1, context: html, text, full: html, text
    af1498d72e78e14d8b17ad2549f895611ead0cf2 Fri Jan 8 16:17:41 2021 -0800
    Code Review refs #26740
• src/hg/makeDb/trackDb/human/covidMuts.html
  • lines changed 5, context: html, text, full: html, text
    1f3567f61cb22650d1b347ad5f6fbb7224bb21d2 Thu Jan 14 12:16:55 2021 -0800
    Adding sessions for multi-Region for refs #26351
• src/hg/makeDb/trackDb/human/hg19/fetalGeneAtlas.ra
  • lines changed 150, context: html, text, full: html, text
    c000f4b75359c1bad9b84c793cdfbfab60e3ec97 Sun Jan 10 18:36:30 2021 -0800
    Adding fetalGeneAtlas to hg19
• src/hg/makeDb/trackDb/human/hg19/trackDb.gencode.ra
  • lines changed 1, context: html, text, full: html, text
    0ae47a72fbd66b8975e4f5598acba72f6896adcd Tue Jan 12 17:22:05 2021 -0800
    Fixing visibilties and adding pennantIcons for new gencode track releases refs #26716
• src/hg/makeDb/trackDb/human/hg19/trackDb.ra
  • lines changed 2, context: html, text, full: html, text
    c000f4b75359c1bad9b84c793cdfbfab60e3ec97 Sun Jan 10 18:36:30 2021 -0800
    Adding fetalGeneAtlas to hg19
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV35lift37.ra
  • lines changed 1, context: html, text, full: html, text
    0ae47a72fbd66b8975e4f5598acba72f6896adcd Tue Jan 12 17:22:05 2021 -0800
    Fixing visibilties and adding pennantIcons for new gencode track releases refs #26716
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV36lift37.ra
  • lines changed 1, context: html, text, full: html, text
    0ae47a72fbd66b8975e4f5598acba72f6896adcd Tue Jan 12 17:22:05 2021 -0800
    Fixing visibilties and adding pennantIcons for new gencode track releases refs #26716
• src/hg/makeDb/trackDb/human/hg38/bloodHao.ra
  • lines changed 128, context: html, text, full: html, text
    c3a3b7e3f381352124fc44a196fc94989edc91be Mon Jan 11 14:42:21 2021 -0800
    Being consistent about using 'binned by' rather than 'sorted by'
  • lines changed 9, context: html, text, full: html, text
    82f289a4ffc0110281bed73bd64319201d4fca38 Tue Jan 12 18:01:09 2021 -0800
    Slight tweaking of red colors. Better labeling of one track. Experimenting with Kate's barChartCategoryUrl. Careful hgTracks crashes if there is a barChartCategoryUrl that points to a nonexistent file.
• src/hg/makeDb/trackDb/human/hg38/cortexVelmeshev.ra
  • lines changed 100, context: html, text, full: html, text
    003cc83285b42feb62f816b43ad2c129e9bbaf36 Sat Jan 9 15:58:47 2021 -0800
    Adding cortexVelmeshev and heartCellAtlas supertracks
  • lines changed 16, context: html, text, full: html, text
    c3a3b7e3f381352124fc44a196fc94989edc91be Mon Jan 11 14:42:21 2021 -0800
    Being consistent about using 'binned by' rather than 'sorted by'
• src/hg/makeDb/trackDb/human/hg38/fetalGeneAtlas.ra
  • lines changed 151, context: html, text, full: html, text
    9a068535365abc9308bc15ca4b3e3ab2b75cc6a9 Sun Jan 10 19:21:20 2021 -0800
    Adding fetalGeneAtlas lifted version to hg38
  • lines changed 8, context: html, text, full: html, text
    c3a3b7e3f381352124fc44a196fc94989edc91be Mon Jan 11 14:42:21 2021 -0800
    Being consistent about using 'binned by' rather than 'sorted by'
• src/hg/makeDb/trackDb/human/hg38/gnomad.ra
  • lines changed 46, context: html, text, full: html, text
    68db390cbf59d294efae87c82da027b751bb1684 Wed Jan 13 11:35:21 2021 -0800
    Fixing up gnomad v3 description page to account for v3.1 update, this removes old v3 track from public listing, refs #26449
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    8c9c1b5f1136ab92c9e97ba4ca50121ff7e8257e Thu Jan 14 10:17:34 2021 -0800
    Adding default visibilty, refs #26449
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    bf8466c247177896caac973767f2aecba552b181 Thu Jan 14 10:46:19 2021 -0800
    Staging gnomad track v3.1 on beta, refs #26449
  • lines changed 10, context: html, text, full: html, text
    b41bd66552223971323090949ef5c01059959464 Thu Jan 14 12:14:01 2021 -0800
    Staging gnomad track v3.1 on beta-public, refs #26449
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    104d56a480253796fd9e50aff77d99dda2df2760 Fri Jan 15 17:43:03 2021 -0800
    Adding "Updated" pennantIcons to the newly updated gnomAD track, refs #26449
• src/hg/makeDb/trackDb/human/hg38/gnomadV3_1.html
  • lines changed 169, context: html, text, full: html, text
    68db390cbf59d294efae87c82da027b751bb1684 Wed Jan 13 11:35:21 2021 -0800
    Fixing up gnomad v3 description page to account for v3.1 update, this removes old v3 track from public listing, refs #26449
  • lines changed 3, context: html, text, full: html, text
    0f603eeec87293557a65d5b15f5142a57ec60a3b Wed Jan 13 15:40:23 2021 -0800
    Added a link for more details on Variant types, refs #26449
• src/hg/makeDb/trackDb/human/hg38/heartCellAtlas.ra
  • lines changed 191, context: html, text, full: html, text
    003cc83285b42feb62f816b43ad2c129e9bbaf36 Sat Jan 9 15:58:47 2021 -0800
    Adding cortexVelmeshev and heartCellAtlas supertracks
  • lines changed 12, context: html, text, full: html, text
    c3a3b7e3f381352124fc44a196fc94989edc91be Mon Jan 11 14:42:21 2021 -0800
    Being consistent about using 'binned by' rather than 'sorted by'
• src/hg/makeDb/trackDb/human/hg38/kidneyStewart.ra
  • lines changed 100, context: html, text, full: html, text
    38e5f2ae882777653eb496e91c47b8702e1fc9fa Sat Jan 9 20:39:00 2021 -0800
    Adding kidneyStewart single cell supertrack.
• src/hg/makeDb/trackDb/human/hg38/lungVieiraBraga.ra
  • lines changed 25, context: html, text, full: html, text
    029e421b5aa5d01f1b0bb131b2bbd8b44333fecd Sun Jan 10 11:55:19 2021 -0800
    Adding lungVieiraBraga data set from Teichman lab.
• src/hg/makeDb/trackDb/human/hg38/muscleDeMicheli.ra
  • lines changed 45, context: html, text, full: html, text
    08591f8a1f2eb71b2706af96e8649412cfd6950a Sat Jan 9 22:15:15 2021 -0800
    Adding muscleDeMicheli single cell data set.
• src/hg/makeDb/trackDb/human/hg38/trackDb.gencode.ra
  • lines changed 1, context: html, text, full: html, text
    0ae47a72fbd66b8975e4f5598acba72f6896adcd Tue Jan 12 17:22:05 2021 -0800
    Fixing visibilties and adding pennantIcons for new gencode track releases refs #26716
• src/hg/makeDb/trackDb/human/hg38/trackDb.ra
  • lines changed 3, context: html, text, full: html, text
    003cc83285b42feb62f816b43ad2c129e9bbaf36 Sat Jan 9 15:58:47 2021 -0800
    Adding cortexVelmeshev and heartCellAtlas supertracks
  • lines changed 1, context: html, text, full: html, text
    38e5f2ae882777653eb496e91c47b8702e1fc9fa Sat Jan 9 20:39:00 2021 -0800
    Adding kidneyStewart single cell supertrack.
  • lines changed 1, context: html, text, full: html, text
    08591f8a1f2eb71b2706af96e8649412cfd6950a Sat Jan 9 22:15:15 2021 -0800
    Adding muscleDeMicheli single cell data set.
  • lines changed 1, context: html, text, full: html, text
    029e421b5aa5d01f1b0bb131b2bbd8b44333fecd Sun Jan 10 11:55:19 2021 -0800
    Adding lungVieiraBraga data set from Teichman lab.
  • lines changed 2, context: html, text, full: html, text
    9a068535365abc9308bc15ca4b3e3ab2b75cc6a9 Sun Jan 10 19:21:20 2021 -0800
    Adding fetalGeneAtlas lifted version to hg38
• src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV30.ra
  • lines changed 1, context: html, text, full: html, text
    0ae47a72fbd66b8975e4f5598acba72f6896adcd Tue Jan 12 17:22:05 2021 -0800
    Fixing visibilties and adding pennantIcons for new gencode track releases refs #26716
• src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV32.ra
  • lines changed 1, context: html, text, full: html, text
    0ae47a72fbd66b8975e4f5598acba72f6896adcd Tue Jan 12 17:22:05 2021 -0800
    Fixing visibilties and adding pennantIcons for new gencode track releases refs #26716
• src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV34.ra
  • lines changed 1, context: html, text, full: html, text
    0ae47a72fbd66b8975e4f5598acba72f6896adcd Tue Jan 12 17:22:05 2021 -0800
    Fixing visibilties and adding pennantIcons for new gencode track releases refs #26716
• src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV35.ra
  • lines changed 2, context: html, text, full: html, text
    0ae47a72fbd66b8975e4f5598acba72f6896adcd Tue Jan 12 17:22:05 2021 -0800
    Fixing visibilties and adding pennantIcons for new gencode track releases refs #26716
• src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV36.ra
  • lines changed 1, context: html, text, full: html, text
    0ae47a72fbd66b8975e4f5598acba72f6896adcd Tue Jan 12 17:22:05 2021 -0800
    Fixing visibilties and adding pennantIcons for new gencode track releases refs #26716
• src/hg/makeDb/trackDb/human/trackDb.canFam5.ra
  • lines changed 15, context: html, text, full: html, text
    7df5b37cb3af51f3d02ca739a94f4803962e1d53 Fri Jan 15 16:25:12 2021 -0800
    make canFam5 chainNet alpha release only refs #25917
• src/hg/makeDb/trackDb/human/trackDb.ra
  • lines changed 10, context: html, text, full: html, text
    4661f6124645391aa86e70fa7b3c1b0677ebeb6b Thu Jan 14 10:18:03 2021 -0800
    Adding search and html for lrgBigPsl track, refs #24672
  • lines changed 23, context: html, text, full: html, text
    cd11b2eb813eb98b57ab3bbebd32c9a86737c9d5 Mon Jan 18 02:45:56 2021 -0800
    adding CADD track, refs #18492
• src/hg/makeDb/trackDb/mouse/mm39/cons35way.html
  • lines changed 502, context: html, text, full: html, text
    9bbae2ea944535fafbe0eade7185a925dbcaaa43 Tue Jan 12 11:26:47 2021 -0800
    description page for 35-way refs #26584
• src/hg/makeDb/trackDb/mouse/mm39/trackDb.chainNet.ra
  • lines changed 646, context: html, text, full: html, text
    0c0748fbe5a4696ca1be16c347a9932a6dc6c56d Wed Jan 13 15:34:16 2021 -0800
    adding composite chainNet tracks for mm39 refs #26584
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    83f9f98ab3a8cd24938cfc22bd73009d4990dd7b Wed Jan 13 15:37:07 2021 -0800
    correct names on these track composites refs #26584
• src/hg/makeDb/trackDb/mouse/mm39/trackDb.ra
  • lines changed 5, context: html, text, full: html, text
    0c0748fbe5a4696ca1be16c347a9932a6dc6c56d Wed Jan 13 15:34:16 2021 -0800
    adding composite chainNet tracks for mm39 refs #26584
• src/hg/makeDb/trackDb/mouse/mm39/trackDb.rbestNet.ra
  • lines changed 646, context: html, text, full: html, text
    0c0748fbe5a4696ca1be16c347a9932a6dc6c56d Wed Jan 13 15:34:16 2021 -0800
    adding composite chainNet tracks for mm39 refs #26584
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    83f9f98ab3a8cd24938cfc22bd73009d4990dd7b Wed Jan 13 15:37:07 2021 -0800
    correct names on these track composites refs #26584
• src/hg/makeDb/trackDb/mouse/mm39/trackDb.syntenicNet.ra
  • lines changed 646, context: html, text, full: html, text
    0c0748fbe5a4696ca1be16c347a9932a6dc6c56d Wed Jan 13 15:34:16 2021 -0800
    adding composite chainNet tracks for mm39 refs #26584
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    83f9f98ab3a8cd24938cfc22bd73009d4990dd7b Wed Jan 13 15:37:07 2021 -0800
    correct names on these track composites refs #26584
• src/hg/makeDb/trackDb/tagTypes.tab
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    f9ff87e94780b2e5a4c74df653e16a28b976f0d8 Mon Jan 11 14:39:22 2021 -0800
    Making transformFunc apply to barCharts. Adding barChartLimit.
  • lines changed 1, context: html, text, full: html, text
    0c0748fbe5a4696ca1be16c347a9932a6dc6c56d Wed Jan 13 15:34:16 2021 -0800
    adding composite chainNet tracks for mm39 refs #26584
• src/hg/makeDb/trackDb/trackDb.chainNet.mammal.ra
  • lines changed 5, context: html, text, full: html, text
    7df5b37cb3af51f3d02ca739a94f4803962e1d53 Fri Jan 15 16:25:12 2021 -0800
    make canFam5 chainNet alpha release only refs #25917
• src/hg/makeDb/trackDb/virus/wuhCor1/abEscape.ra
  • lines changed 29, context: html, text, full: html, text
    eb7ba6183c194e949bc81dd1c81682338ce5d04a Mon Jan 18 07:49:25 2021 -0800
    revamping the antibody escape supertrack again, refs #26806
• src/hg/makeDb/trackDb/virus/wuhCor1/bloomEsc.ra
  • lines changed 624, context: html, text, full: html, text
    eb7ba6183c194e949bc81dd1c81682338ce5d04a Mon Jan 18 07:49:25 2021 -0800
    revamping the antibody escape supertrack again, refs #26806
• src/hg/makeDb/trackDb/virus/wuhCor1/escapeMonocl.html
  • lines changed 107, context: html, text, full: html, text
    a6eaca06b3b81d440a076bd6eb2b724c30a7638d Fri Jan 15 16:15:39 2021 -0800
    temporarily fixing a trackDb problem, until Monday, when the whole escape supertrack will be fixed properly, no redmine
• src/hg/makeDb/trackDb/virus/wuhCor1/escapeMonocl.ra
  • lines changed 2269, context: html, text, full: html, text
    a6eaca06b3b81d440a076bd6eb2b724c30a7638d Fri Jan 15 16:15:39 2021 -0800
    temporarily fixing a trackDb problem, until Monday, when the whole escape supertrack will be fixed properly, no redmine
• src/hg/makeDb/trackDb/virus/wuhCor1/sarsCov2PhyloPubParsimony.html
  • lines changed 88, context: html, text, full: html, text
    2b17a440f0e380ac166a0df8dc99aa09fef70400 Tue Jan 12 17:24:31 2021 -0800
    Update sarsCov2PhyloPub with release alpha to include only subtracks with all public sequences (omit subset shared w/GISAID). Add sarsCov2PhyloPubParsimony track. refs #26804, #26805
• src/hg/makeDb/trackDb/virus/wuhCor1/spikeMuts.html
  • lines changed 11, context: html, text, full: html, text
    eb99330eb3b694764fe2c9507b25983790626a92 Mon Jan 11 21:11:46 2021 -0800
    First cut Spike Mutations track. refs #26782
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    2f7d821771bebbb184ae1eeb8c315cb21b65efaf Tue Jan 12 20:14:51 2021 -0800
    Add search (not trixing properly yet tho) and a bit more track description. refs #26782
  • lines changed 1, context: html, text, full: html, text
    e437ade9a27ff211aba1017b158d3de536e06f1a Tue Jan 12 20:44:11 2021 -0800
    Correction to sequencing date description. refs #26782
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    fac4a1c69ec75bebb0f959e344161d90df7d9a80 Wed Jan 13 17:46:50 2021 -0800
    Expanding and polishing track description. refs #26782
• src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.nextstrain.ra
  • lines changed 260, context: html, text, full: html, text
    5696c2a99447dd591aef26258f4dbef57e4e5d82 Thu Jan 14 15:39:40 2021 -0800
    Nextstrain added new year-letter clades, and their JSON no longer includes the old clades; update script and subtrack stanzas.
• src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.ra
  • lines changed 10, context: html, text, full: html, text
    eb99330eb3b694764fe2c9507b25983790626a92 Mon Jan 11 21:11:46 2021 -0800
    First cut Spike Mutations track. refs #26782
  • lines changed 5, context: html, text, full: html, text
    3b9ccf35f7093d691b0c2da381eeb3186c478fcf Tue Jan 12 10:47:13 2021 -0800
    Polishing track: add colors, url links, mouseover. refs #26782
  • lines changed 67, context: html, text, full: html, text
    2b17a440f0e380ac166a0df8dc99aa09fef70400 Tue Jan 12 17:24:31 2021 -0800
    Update sarsCov2PhyloPub with release alpha to include only subtracks with all public sequences (omit subset shared w/GISAID). Add sarsCov2PhyloPubParsimony track. refs #26804, #26805
  • lines changed 10, context: html, text, full: html, text
    2f7d821771bebbb184ae1eeb8c315cb21b65efaf Tue Jan 12 20:14:51 2021 -0800
    Add search (not trixing properly yet tho) and a bit more track description. refs #26782
  • lines changed 1, context: html, text, full: html, text
    cd4088be9d44ebdc451a6019e7cd5e4ec4862666 Wed Jan 13 11:44:04 2021 -0800
    Add padding to search result, as per RKuhn. refs #26782
  • lines changed 11, context: html, text, full: html, text
    4509ecab6bc1f50de37b2ce05f470cdaf567f7d7 Thu Jan 14 17:52:05 2021 -0800
    Staging phylo track on Beta refs #26804
  • lines changed 24, context: html, text, full: html, text
    29e3b0c6cf35ca263085e5f00d512ca39c65af70 Fri Jan 15 03:34:54 2021 -0800
    moving around the antibody escape tracks for wuhCor1, creating two new super tracks, refs #26806
  • lines changed 3, context: html, text, full: html, text
    a6eaca06b3b81d440a076bd6eb2b724c30a7638d Fri Jan 15 16:15:39 2021 -0800
    temporarily fixing a trackDb problem, until Monday, when the whole escape supertrack will be fixed properly, no redmine
  • lines changed 1, context: html, text, full: html, text
    eb7ba6183c194e949bc81dd1c81682338ce5d04a Mon Jan 18 07:49:25 2021 -0800
    revamping the antibody escape supertrack again, refs #26806
• src/hg/oneShot/freen/freen.c
  • lines changed 187, context: html, text, full: html, text
    5f443dee868d091ae2523a1b6f9b4e6ddc90b3d0 Tue Jan 5 15:37:01 2021 -0800
    Freen plays with colors for new single cell RNA tracks, and generates many shades of mostly brown.
  • lines changed 29, context: html, text, full: html, text
    138a38b35d9c7a79f991ad12c4a993b6eb160352 Tue Jan 5 19:40:30 2021 -0800
    The first version worth using. I should give it a name!
• src/hg/oneShot/freen/makefile
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    118dd60772dacb0ee6e8612f31a702fe2b6e7ebf Mon Jan 11 14:45:03 2021 -0800
    Taking special -lhdf5 line out of link libraries since freen no longer needs them.
• src/hg/txGraph/makefile
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    315ac2b4d26b6ef65d4ff1fcd822f849153790cb Tue Jan 12 12:49:38 2021 -0800
    Oops, forgot to take utility I deleted out of makefile.
• src/hg/txGraph/txgToGeneBed/makefile
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    cf64dcdf6ac6c74bb60f4fd2d58c155d0c6ba32b Mon Jan 11 15:54:57 2021 -0800
    Did not need this experimental utility after all, there was a better way with appris database.
• src/hg/txGraph/txgToGeneBed/txgToGeneBed.c
  • lines changed 80, context: html, text, full: html, text
    cf64dcdf6ac6c74bb60f4fd2d58c155d0c6ba32b Mon Jan 11 15:54:57 2021 -0800
    Did not need this experimental utility after all, there was a better way with appris database.
• src/hg/utils/gencodeGeneSymVerTx/gencodeGeneSymVerTx.c
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    09696c13b5115e7e36104c0f94ab0cbe5e099b5d Tue Jan 12 11:11:57 2021 -0800
    Improving usage message upon code review advice.
• src/hg/utils/gencodeVersionForGenes/gencodeVersionForGenes.c
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    d7636b6985ad8f40784e87854b9e2c383c1ca4b3 Mon Jan 11 14:48:06 2021 -0800
    Adding geneToId output option.
  • lines changed 3, context: html, text, full: html, text
    7ad18256b4d7adadd102d15ffa70f5c628cc29ff Mon Jan 11 16:00:12 2021 -0800
    Improving usage statement about where the reference file is kept.
• src/hg/utils/otto/nextstrainNcov/nextstrain.py
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    5696c2a99447dd591aef26258f4dbef57e4e5d82 Thu Jan 14 15:39:40 2021 -0800
    Nextstrain added new year-letter clades, and their JSON no longer includes the old clades; update script and subtrack stanzas.
• src/hg/utils/otto/nextstrainNcov/nextstrainClade.as
  • lines changed 1, context: html, text, full: html, text
    5696c2a99447dd591aef26258f4dbef57e4e5d82 Thu Jan 14 15:39:40 2021 -0800
    Nextstrain added new year-letter clades, and their JSON no longer includes the old clades; update script and subtrack stanzas.
• src/hg/utils/otto/sarscov2phylo/publicCredits.sh
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    ed89e722713f45eba35f9a7f08c3ff58c1385bf1 Tue Jan 12 10:39:00 2021 -0800
    Comment tweaks
• src/inc/cheapcgi.h
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    067cd6631ecf656cbe692e31ed033bc916979bf5 Mon Jan 11 14:55:21 2021 -0800
    Adding in cgiMakeDoublVarWithExtra so as to be able to disable a double countrol the same way you do an int one.
• src/inc/obscure.h
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    946ec4deb61682f1608c3c8f08dfd1ed838fc6d6 Mon Jan 11 14:56:33 2021 -0800
    Added a basic tab-sep output a line to library.
• src/inc/sparseMatrix.h
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    a3939547c53f1ccb39910e61bfa90a0c54310273 Tue Jan 5 00:40:36 2021 -0800
    First cut of vRowMatrix to stream through a variety of matrices semi-transparently I hope. FOr now just handles tsv though.
• src/inc/srcVersion.h
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    0db4ddfb542d0b3045cc80ce9de099bd4f005a9f Mon Jan 18 10:06:26 2021 -0800
    New version number v409
• src/inc/vMatrix.h
  • lines changed 64, context: html, text, full: html, text
    a3939547c53f1ccb39910e61bfa90a0c54310273 Tue Jan 5 00:40:36 2021 -0800
    First cut of vRowMatrix to stream through a variety of matrices semi-transparently I hope. FOr now just handles tsv though.
  • lines changed 4, context: html, text, full: html, text
    f1eb91ba57a988ea0919c1ecebc45d3f926fc6c1 Mon Jan 11 14:58:50 2021 -0800
    Adding 'centerLabel' to data structure. In TSV representation this is the first word in the file, in the upper left, where it could be constued to label first column or first row.
• src/lib/bwgCreate.c
  • lines changed 1, context: html, text, full: html, text
    33fcbe3b07d48d3ee11a47c6eacea01885e3a056 Fri Jan 15 16:08:57 2021 -0800
    adding little note to error message that wiggle is 1-based, no redmine
• src/lib/cheapcgi.c
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    067cd6631ecf656cbe692e31ed033bc916979bf5 Mon Jan 11 14:55:21 2021 -0800
    Adding in cgiMakeDoublVarWithExtra so as to be able to disable a double countrol the same way you do an int one.
• src/lib/makefile
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    a3939547c53f1ccb39910e61bfa90a0c54310273 Tue Jan 5 00:40:36 2021 -0800
    First cut of vRowMatrix to stream through a variety of matrices semi-transparently I hope. FOr now just handles tsv though.
• src/lib/obscure.c
  • lines changed 13, context: html, text, full: html, text
    946ec4deb61682f1608c3c8f08dfd1ed838fc6d6 Mon Jan 11 14:56:33 2021 -0800
    Added a basic tab-sep output a line to library.
• src/lib/psl.as
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    40b54767ef31844fc6693a1ad26737daa8935488 Tue Jan 12 16:41:07 2021 -0800
    moving psl.as to hg/lib so buildTableDescriptions can find it.
• src/lib/sparseMatrix.c
  • lines changed 100, context: html, text, full: html, text
    a3939547c53f1ccb39910e61bfa90a0c54310273 Tue Jan 5 00:40:36 2021 -0800
    First cut of vRowMatrix to stream through a variety of matrices semi-transparently I hope. FOr now just handles tsv though.
  • lines changed 14, context: html, text, full: html, text
    99da3db1b62d39f9ed0e24c5fb65ba3392e575dd Mon Jan 11 14:57:13 2021 -0800
    Moving writeTsvRow to lib/obscure.c
• src/lib/strex.c
  • lines changed 41, context: html, text, full: html, text
    3b8231d6039e2a9ffc012414a7881ebf72eee458 Mon Jan 11 16:50:51 2021 -0800
    Implementing subtraction, since it was in the docs, as Jonathon pointed out. #ref 26745
• src/lib/vMatrix.c
  • lines changed 254, context: html, text, full: html, text
    a3939547c53f1ccb39910e61bfa90a0c54310273 Tue Jan 5 00:40:36 2021 -0800
    First cut of vRowMatrix to stream through a variety of matrices semi-transparently I hope. FOr now just handles tsv though.
  • lines changed 9, context: html, text, full: html, text
    f1eb91ba57a988ea0919c1ecebc45d3f926fc6c1 Mon Jan 11 14:58:50 2021 -0800
    Adding 'centerLabel' to data structure. In TSV representation this is the first word in the file, in the upper left, where it could be constued to label first column or first row.
• src/product/mirrorDocs/makefile
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    b32f0ef8402a62095e6db085ee27ef933af441dc Tue Jan 12 03:22:40 2021 -0800
    changes after code review to fix utf8 output from pandoc for our latin1 old school webserver. refs #26789
• src/product/mirrorManual.txt
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    a54c2b8ae8b819cd6ad14f49a5f4d89bfe90e4e3 Fri Jan 15 14:53:01 2021 -0800
    adding quotes for < and > in the markdown mirrorManual.txt, refs #25525
• src/tabFile/tabToTabDir/tabToTabDir.c
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    dcc1ce202a76ae34567a597feebb216f390e3bb0 Mon Jan 11 18:05:57 2021 -0800
    Improved usage and explicitly fv->type - good ideas from Jonathan's code review ref #26745
• src/test/buildTableDescriptions.pl
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    7a14294a4cf3e478e7ed6f353af8c482ee6b8934 Wed Jan 13 11:36:28 2021 -0800
    search only hg/lib for AS files to build the tableDescriptions table.
• src/test/tbd.wrapper.hgwbeta
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    d5dd551a7b0f8410a70f472b42244c16befbc73f Wed Jan 13 11:22:27 2021 -0800
    checking in Jorge's wrapped scripts for buildTableDescriptions
  • lines changed 1, context: html, text, full: html, text
    68510bd1f970ca5e6556f5a47f59341cc983bed3 Thu Jan 14 12:42:27 2021 -0800
    call buildTableDescriptions so it looks only in hg/lib and subdirectores for AS files.
• src/test/tbd.wrapper.hgwdev
  • lines changed 62, context: html, text, full: html, text
    d5dd551a7b0f8410a70f472b42244c16befbc73f Wed Jan 13 11:22:27 2021 -0800
    checking in Jorge's wrapped scripts for buildTableDescriptions
  • lines changed 1, context: html, text, full: html, text
    7a14294a4cf3e478e7ed6f353af8c482ee6b8934 Wed Jan 13 11:36:28 2021 -0800
    search only hg/lib for AS files to build the tableDescriptions table.
• src/utils/bedToBigBed/tests/input/itemRgbBed12.as
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    048c61522d62893e0457b3783d838d938143b453 Mon Jan 11 13:50:09 2021 -0800
    adding bed12 itemRgb compatible tests refs #14840
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    e3999d349f6f18e0cc2c28cbe4e4e0efb4ca42c7 Tue Jan 12 09:23:00 2021 -0800
    change table names to protect the innocent refs #14840
• src/utils/bedToBigBed/tests/input/itemRgbBed12.bed
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    048c61522d62893e0457b3783d838d938143b453 Mon Jan 11 13:50:09 2021 -0800
    adding bed12 itemRgb compatible tests refs #14840
• src/utils/bedToBigBed/tests/input/reservedBed12.as
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    048c61522d62893e0457b3783d838d938143b453 Mon Jan 11 13:50:09 2021 -0800
    adding bed12 itemRgb compatible tests refs #14840
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    e3999d349f6f18e0cc2c28cbe4e4e0efb4ca42c7 Tue Jan 12 09:23:00 2021 -0800
    change table names to protect the innocent refs #14840
• src/utils/bedToBigBed/tests/input/reservedBed12.bed
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    048c61522d62893e0457b3783d838d938143b453 Mon Jan 11 13:50:09 2021 -0800
    adding bed12 itemRgb compatible tests refs #14840
• src/utils/bedToBigBed/tests/makefile
  • lines changed 27, context: html, text, full: html, text
    048c61522d62893e0457b3783d838d938143b453 Mon Jan 11 13:50:09 2021 -0800
    adding bed12 itemRgb compatible tests refs #14840
• src/utils/clusterMatrixToBarChartBed/clusterMatrixToBarChartBed.c
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    ee6a0d80b7fc2cf0cac37157b36834ef39a32c33 Sat Jan 9 09:20:30 2021 -0800
    Adding note about other utilities that do similar things to usage statement.
  • lines changed 7, context: html, text, full: html, text
    b09810165e57a61fc8e61549ea87da8b2dca3f58 Mon Jan 11 15:50:41 2021 -0800
    Changing some Barchart to BarChart that I'd missed.
  • lines changed 4, context: html, text, full: html, text
    b640e1cf96ee2c383dbf464c1737786945497fcb Mon Jan 11 15:51:38 2021 -0800
    Removing debugging statement.
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    482d460b09a00806e44c9df3005fad97ce173ec1 Tue Jan 12 11:13:48 2021 -0800
    Fixing an off by one bug Jonathan spotted during code review.
• src/utils/faSize/faSize.c
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    1dc0d205786891dc35074276f3a64ca436b09221 Mon Jan 11 16:36:27 2021 -0800
    As for -detailed, don't print summary at end for -veryDetailed output so it's more pipeline-friendly.
• src/utils/matrixNormalize/makefile
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    2e56b90285da462507a48babb2f9aee32dcbb96c Sat Jan 9 11:08:01 2021 -0800
    A little matrix normalizing command, one of many in the world.
• src/utils/matrixNormalize/matrixNormalize.c
  • lines changed 174, context: html, text, full: html, text
    2e56b90285da462507a48babb2f9aee32dcbb96c Sat Jan 9 11:08:01 2021 -0800
    A little matrix normalizing command, one of many in the world.
• src/utils/matrixNormalize/tests/colLength.out
  • lines changed 5, context: html, text, full: html, text
    2e56b90285da462507a48babb2f9aee32dcbb96c Sat Jan 9 11:08:01 2021 -0800
    A little matrix normalizing command, one of many in the world.
• src/utils/matrixNormalize/tests/colSum.out
  • lines changed 5, context: html, text, full: html, text
    2e56b90285da462507a48babb2f9aee32dcbb96c Sat Jan 9 11:08:01 2021 -0800
    A little matrix normalizing command, one of many in the world.
• src/utils/matrixNormalize/tests/rowLength.out
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    2e56b90285da462507a48babb2f9aee32dcbb96c Sat Jan 9 11:08:01 2021 -0800
    A little matrix normalizing command, one of many in the world.
• src/utils/matrixNormalize/tests/rowSum.out
  • lines changed 4, context: html, text, full: html, text
    2e56b90285da462507a48babb2f9aee32dcbb96c Sat Jan 9 11:08:01 2021 -0800
    A little matrix normalizing command, one of many in the world.
• src/utils/matrixNormalize/tests/test.in
  • lines changed 5, context: html, text, full: html, text
    2e56b90285da462507a48babb2f9aee32dcbb96c Sat Jan 9 11:08:01 2021 -0800
    A little matrix normalizing command, one of many in the world.
• src/utils/matrixRelabel/matrixRelabel.c
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    ff2840f7c732b4d9d368ce18ddcac2ce6c7148ee Mon Jan 11 14:50:23 2021 -0800
    Adding options to do table lookup on labels, to trim them, and renaming some old options to be more clear.
• src/utils/matrixScale/matrixScale.c
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    6f5ac0886db21eaeb6d4d158c85bbf60527761e1 Mon Jan 11 18:07:07 2021 -0800
    Fixed usage statement per code review #26745
• src/utils/matrixToBarChartBed/matrixToBarChartBed.c
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    9a51fe6723423851ee77535b465399a52e244084 Mon Jan 11 18:16:04 2021 -0800
    Improving usage statement per code review #26745
• src/utils/qa/weeklybld/buildEnv.csh
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    a59298328194e29ac4a31deac40ddf2f82657a17 Mon Jan 18 10:04:04 2021 -0800
    v409 final build

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• files changed: 181